Broad CTL response is required to clear latent HIV-1 due to dominance of escape mutations.

Abstract:

:Despite antiretroviral therapy (ART), human immunodeficiency virus (HIV)-1 persists in a stable latent reservoir, primarily in resting memory CD4(+) T cells. This reservoir presents a major barrier to the cure of HIV-1 infection. To purge the reservoir, pharmacological reactivation of latent HIV-1 has been proposed and tested both in vitro and in vivo. A key remaining question is whether virus-specific immune mechanisms, including cytotoxic T lymphocytes (CTLs), can clear infected cells in ART-treated patients after latency is reversed. Here we show that there is a striking all or none pattern for CTL escape mutations in HIV-1 Gag epitopes. Unless ART is started early, the vast majority (>98%) of latent viruses carry CTL escape mutations that render infected cells insensitive to CTLs directed at common epitopes. To solve this problem, we identified CTLs that could recognize epitopes from latent HIV-1 that were unmutated in every chronically infected patient tested. Upon stimulation, these CTLs eliminated target cells infected with autologous virus derived from the latent reservoir, both in vitro and in patient-derived humanized mice. The predominance of CTL-resistant viruses in the latent reservoir poses a major challenge to viral eradication. Our results demonstrate that chronically infected patients retain a broad-spectrum viral-specific CTL response and that appropriate boosting of this response may be required for the elimination of the latent reservoir.

journal_name

Nature

journal_title

Nature

authors

Deng K,Pertea M,Rongvaux A,Wang L,Durand CM,Ghiaur G,Lai J,McHugh HL,Hao H,Zhang H,Margolick JB,Gurer C,Murphy AJ,Valenzuela DM,Yancopoulos GD,Deeks SG,Strowig T,Kumar P,Siliciano JD,Salzberg SL,Flavell RA,Shan

doi

10.1038/nature14053

subject

Has Abstract

pub_date

2015-01-15 00:00:00

pages

381-5

issue

7534

eissn

0028-0836

issn

1476-4687

pii

nature14053

journal_volume

517

pub_type

杂志文章

相关文献

NATURE文献大全
  • Purkinje neuron synchrony elicits time-locked spiking in the cerebellar nuclei.

    abstract::An unusual feature of the cerebellar cortex is that its output neurons, Purkinje cells, release GABA (γ-aminobutyric acid). Their high intrinsic firing rates (50 Hz) and extensive convergence predict that their target neurons in the cerebellar nuclei would be largely inhibited unless Purkinje cells pause their spiking...

    journal_title:Nature

    pub_type: 杂志文章

    doi:10.1038/nature10732

    authors: Person AL,Raman IM

    更新日期:2011-12-25 00:00:00

  • Oligodendrocyte-myelin glycoprotein is a Nogo receptor ligand that inhibits neurite outgrowth.

    abstract::The inhibitory activity associated with myelin is a major obstacle for successful axon regeneration in the adult mammalian central nervous system (CNS). In addition to myelin-associated glycoprotein (MAG) and Nogo-A, available evidence suggests the existence of additional inhibitors in CNS myelin. We show here that a ...

    journal_title:Nature

    pub_type: 杂志文章

    doi:10.1038/nature00867

    authors: Wang KC,Koprivica V,Kim JA,Sivasankaran R,Guo Y,Neve RL,He Z

    更新日期:2002-06-27 00:00:00

  • Interactome map uncovers phosphatidylserine transport by oxysterol-binding proteins.

    abstract::The internal organization of eukaryotic cells into functionally specialized, membrane-delimited organelles of unique composition implies a need for active, regulated lipid transport. Phosphatidylserine (PS), for example, is synthesized in the endoplasmic reticulum and then preferentially associates--through mechanisms...

    journal_title:Nature

    pub_type: 杂志文章

    doi:10.1038/nature12430

    authors: Maeda K,Anand K,Chiapparino A,Kumar A,Poletto M,Kaksonen M,Gavin AC

    更新日期:2013-09-12 00:00:00

  • Covalent inhibition revealed by the crystal structure of the caspase-8/p35 complex.

    abstract::Apoptosis is a highly regulated process that is crucial for normal development and homeostasis of multicellular organisms. The p35 protein from baculoviruses effectively prevents apoptosis by its broad-spectrum caspase inhibition. Here we report the crystal structure of p35 in complex with human caspase-8 at 3.0 A res...

    journal_title:Nature

    pub_type: 杂志文章

    doi:10.1038/35068604

    authors: Xu G,Cirilli M,Huang Y,Rich RL,Myszka DG,Wu H

    更新日期:2001-03-22 00:00:00

  • The Schistosoma japonicum genome reveals features of host-parasite interplay.

    abstract::Schistosoma japonicum is a parasitic flatworm that causes human schistosomiasis, which is a significant cause of morbidity in China and the Philippines. Here we present a draft genomic sequence for the worm. The genome provides a global insight into the molecular architecture and host interaction of this complex metaz...

    journal_title:Nature

    pub_type: 杂志文章

    doi:10.1038/nature08140

    authors: Schistosoma japonicum Genome Sequencing and Functional Analysis Consortium.

    更新日期:2009-07-16 00:00:00

  • Human transforming growth factor-beta complementary DNA sequence and expression in normal and transformed cells.

    abstract::The partial amino-acid sequence of purified human transforming growth factor-beta (TGF-beta) was used to identify a series of cDNA clones encoding the protein. The cDNA sequence indicates that the 112-amino acid monomeric form of the natural TGF-beta homodimer is derived proteolytically from a much longer precursor po...

    journal_title:Nature

    pub_type: 杂志文章

    doi:10.1038/316701a0

    authors: Derynck R,Jarrett JA,Chen EY,Eaton DH,Bell JR,Assoian RK,Roberts AB,Sporn MB,Goeddel DV

    更新日期:1985-08-22 00:00:00

  • Physiology and molecular phylogeny of coexisting Prochlorococcus ecotypes.

    abstract::The cyanobacterium Prochlorococcus is the dominant oxygenic phototroph in the tropical and subtropical regions of the world's oceans. It can grow at a range of depths over which light intensities can vary by up to 4 orders of magnitude. This broad depth distribution has been hypothesized to stem from the coexistence o...

    journal_title:Nature

    pub_type: 杂志文章

    doi:10.1038/30965

    authors: Moore LR,Rocap G,Chisholm SW

    更新日期:1998-06-04 00:00:00

  • Respiration as the main determinant of carbon balance in European forests.

    abstract::Carbon exchange between the terrestrial biosphere and the atmosphere is one of the key processes that need to be assessed in the context of the Kyoto Protocol. Several studies suggest that the terrestrial biosphere is gaining carbon, but these estimates are obtained primarily by indirect methods, and the factors that ...

    journal_title:Nature

    pub_type: 杂志文章

    doi:10.1038/35009084

    authors: Valentini R,Matteucci G,Dolman AJ,Schulze ED,Rebmann C,Moors EJ,Granier A,Gross P,Jensen NO,Pilegaard K,Lindroth A,Grelle A,Bernhofer C,Grünwald T,Aubinet M,Ceulemans R,Kowalski AS,Vesala T,Rannik U,Berbigier P,Lo

    更新日期:2000-04-20 00:00:00

  • Global reference mapping of human transcription factor footprints.

    abstract::Combinatorial binding of transcription factors to regulatory DNA underpins gene regulation in all organisms. Genetic variation in regulatory regions has been connected with diseases and diverse phenotypic traits1, but it remains challenging to distinguish variants that affect regulatory function2. Genomic DNase I foot...

    journal_title:Nature

    pub_type: 杂志文章

    doi:10.1038/s41586-020-2528-x

    authors: Vierstra J,Lazar J,Sandstrom R,Halow J,Lee K,Bates D,Diegel M,Dunn D,Neri F,Haugen E,Rynes E,Reynolds A,Nelson J,Johnson A,Frerker M,Buckley M,Kaul R,Meuleman W,Stamatoyannopoulos JA

    更新日期:2020-07-01 00:00:00

  • A superantigen encoded in the open reading frame of the 3' long terminal repeat of mouse mammary tumour virus.

    abstract::Mice express a collection of superantigens, which bind to class II major histocompatibility proteins and interact with T cells bearing particular V beta chains as part of their alpha beta receptors. These superantigens have been suggested to be encoded by exogenous or endogenous mouse mammary tumour viruses. One such ...

    journal_title:Nature

    pub_type: 杂志文章

    doi:10.1038/350203a0

    authors: Choi Y,Kappler JW,Marrack P

    更新日期:1991-03-21 00:00:00

  • A brain-spine interface alleviating gait deficits after spinal cord injury in primates.

    abstract::Spinal cord injury disrupts the communication between the brain and the spinal circuits that orchestrate movement. To bypass the lesion, brain-computer interfaces have directly linked cortical activity to electrical stimulation of muscles, and have thus restored grasping abilities after hand paralysis. Theoretically, ...

    journal_title:Nature

    pub_type: 杂志文章

    doi:10.1038/nature20118

    authors: Capogrosso M,Milekovic T,Borton D,Wagner F,Moraud EM,Mignardot JB,Buse N,Gandar J,Barraud Q,Xing D,Rey E,Duis S,Jianzhong Y,Ko WK,Li Q,Detemple P,Denison T,Micera S,Bezard E,Bloch J,Courtine G

    更新日期:2016-11-10 00:00:00

  • Controlling anisotropic nanoparticle growth through plasmon excitation.

    abstract::Inorganic nanoparticles exhibit size-dependent properties that are of interest for applications ranging from biosensing and catalysis to optics and data storage. They are readily available in a wide variety of discrete compositions and sizes. Shape-selective synthesis strategies now also yield shapes other than nanosp...

    journal_title:Nature

    pub_type: 杂志文章

    doi:10.1038/nature02020

    authors: Jin R,Cao YC,Hao E,Métraux GS,Schatz GC,Mirkin CA

    更新日期:2003-10-02 00:00:00

  • Clarifying the glass-transition behaviour of water by comparison with hyperquenched inorganic glasses.

    abstract::The formation of glasses is normal for substances that remain liquid over a wide temperature range (the 'good glassformers') and can be induced for most liquids if cooling is fast enough to bypass crystallization. During reheating but still below the melting point, good glassformers exhibit glass transitions as they a...

    journal_title:Nature

    pub_type: 杂志文章

    doi:10.1038/nature02295

    authors: Yue Y,Angell CA

    更新日期:2004-02-19 00:00:00

  • CAP defines a second signalling pathway required for insulin-stimulated glucose transport.

    abstract::Insulin stimulates the transport of glucose into fat and muscle cells. Although the precise molecular mechanisms involved in this process remain uncertain, insulin initiates its actions by binding to its tyrosine kinase receptor, leading to the phosphorylation of intracellular substrates. One such substrate is the Cbl...

    journal_title:Nature

    pub_type: 杂志文章

    doi:10.1038/35025089

    authors: Baumann CA,Ribon V,Kanzaki M,Thurmond DC,Mora S,Shigematsu S,Bickel PE,Pessin JE,Saltiel AR

    更新日期:2000-09-14 00:00:00

  • A 'don't eat me' immune signal protects neuronal connections.

    abstract:: ...

    journal_title:Nature

    pub_type: 评论,新闻

    doi:10.1038/d41586-018-07165-8

    authors: Rivest S

    更新日期:2018-11-01 00:00:00

  • Electric fish measure distance in the dark.

    abstract::Distance determination in animals can be achieved by visual or non-visual cues. Weakly electric fish use active electrolocation for orientation in the dark. By perceiving self-produced electric signals with epidermal electroreceptors, fish can detect, locate and analyse nearby objects. Distance discrimination, however...

    journal_title:Nature

    pub_type: 杂志文章

    doi:10.1038/27655

    authors: von der Emde G,Schwarz S,Gomez L,Budelli R,Grant K

    更新日期:1998-10-29 00:00:00

  • Photoselective adaptive femtosecond quantum control in the liquid phase.

    abstract::Coherent light sources can be used to manipulate the outcome of light-matter interactions by exploiting interference phenomena in the time and frequency domain. A powerful tool in this emerging field of 'quantum control' is the adaptive shaping of femtosecond laser pulses, resulting, for instance, in selective molecul...

    journal_title:Nature

    pub_type: 杂志文章

    doi:10.1038/35102037

    authors: Brixner T,Damrauer NH,Niklaus P,Gerber G

    更新日期:2001-11-01 00:00:00

  • Identification and processing of proglucagon in pancreatic islets.

    abstract::Immunoprecipitation and tryptic peptide analysis of newly synthesized proteins from rat islets have identified an 18,000 molecular weight (MW) protein as proglucagon. Conversion of this precursor was kinetically similar to the conversion of proinsulin and resulted in the formation of both pancreatic glucagon and a 10,...

    journal_title:Nature

    pub_type: 杂志文章

    doi:10.1038/282260a0

    authors: Patzelt C,Tager HS,Carroll RJ,Steiner DF

    更新日期:1979-11-15 00:00:00

  • Ligand-receptor binding revealed by the TNF family member TALL-1.

    abstract::The tumour necrosis factor (TNF) ligand TALL-1 and its cognate receptors, BCMA, TACI and BAFF-R, were recently identified as members of the TNF superfamily, which are essential factors contributing to B-cell maturation. The functional, soluble fragment of TALL-1 (sTALL-1) forms a virus-like assembly for its proper fun...

    journal_title:Nature

    pub_type: 杂志文章

    doi:10.1038/nature01543

    authors: Liu Y,Hong X,Kappler J,Jiang L,Zhang R,Xu L,Pan CH,Martin WE,Murphy RC,Shu HB,Dai S,Zhang G

    更新日期:2003-05-01 00:00:00

  • Chemical reduction of three-dimensional silica micro-assemblies into microporous silicon replicas.

    abstract::The carbothermal reduction of silica into silicon requires the use of temperatures well above the silicon melting point (> or =2,000 degrees C). Solid silicon has recently been generated directly from silica at much lower temperatures (< or =850 degrees C) via electrochemical reduction in molten salts. However, the si...

    journal_title:Nature

    pub_type: 杂志文章

    doi:10.1038/nature05570

    authors: Bao Z,Weatherspoon MR,Shian S,Cai Y,Graham PD,Allan SM,Ahmad G,Dickerson MB,Church BC,Kang Z,Abernathy HW 3rd,Summers CJ,Liu M,Sandhage KH

    更新日期:2007-03-08 00:00:00

  • Mutations in the hepatocyte nuclear factor-1alpha gene in maturity-onset diabetes of the young (MODY3)

    abstract::The disease non-insulin-dependent (type 2) diabetes mellitus (NIDDM) is characterized by abnormally high blood glucose resulting from a relative deficiency of insulin. It affects about 2% of the world's population and treatment of diabetes and its complications are an increasing health-care burden. Genetic factors are...

    journal_title:Nature

    pub_type: 杂志文章

    doi:10.1038/384455a0

    authors: Yamagata K,Oda N,Kaisaki PJ,Menzel S,Furuta H,Vaxillaire M,Southam L,Cox RD,Lathrop GM,Boriraj VV,Chen X,Cox NJ,Oda Y,Yano H,Le Beau MM,Yamada S,Nishigori H,Takeda J,Fajans SS,Hattersley AT,Iwasaki N,Hansen T,

    更新日期:1996-12-05 00:00:00

  • Chaos and threshold for irreversibility in sheared suspensions.

    abstract::Systems governed by time reversible equations of motion often give rise to irreversible behaviour. The transition from reversible to irreversible behaviour is fundamental to statistical physics, but has not been observed experimentally in many-body systems. The flow of a newtonian fluid at low Reynolds number can be r...

    journal_title:Nature

    pub_type: 杂志文章

    doi:10.1038/nature04380

    authors: Pine DJ,Gollub JP,Brady JF,Leshansky AM

    更新日期:2005-12-15 00:00:00

  • A network-based analysis of systemic inflammation in humans.

    abstract::Oligonucleotide and complementary DNA microarrays are being used to subclassify histologically similar tumours, monitor disease progress, and individualize treatment regimens. However, extracting new biological insight from high-throughput genomic studies of human diseases is a challenge, limited by difficulties in re...

    journal_title:Nature

    pub_type: 临床试验,杂志文章

    doi:10.1038/nature03985

    authors: Calvano SE,Xiao W,Richards DR,Felciano RM,Baker HV,Cho RJ,Chen RO,Brownstein BH,Cobb JP,Tschoeke SK,Miller-Graziano C,Moldawer LL,Mindrinos MN,Davis RW,Tompkins RG,Lowry SF,Inflamm and Host Response to Injury Large Scale

    更新日期:2005-10-13 00:00:00

  • GSK-3α/β kinases and amyloid production in vivo.

    abstract::Arising from C. J. Phiel, C. A. Wilson, V. M.-Y. Lee & P. S. Klein 423, 435-439 (2003)A major unresolved issue in Alzheimer's disease is identifying the mechanisms that regulate proteolytic processing of amyloid precursor protein (APP)-glycogen synthase kinase-3 (GSK-3) isozymes are thought to be important in this re...

    journal_title:Nature

    pub_type: 评论,杂志文章

    doi:10.1038/nature10615

    authors: Jaworski T,Dewachter I,Lechat B,Gees M,Kremer A,Demedts D,Borghgraef P,Devijver H,Kügler S,Patel S,Woodgett JR,Van Leuven F

    更新日期:2011-12-07 00:00:00

  • Strain effects and phase transitions in photonic resonator crystals.

    abstract::Optical structures with periodic variations of the dielectric constant in one or more directions (photonic crystals) have been employed extensively for studying optical diffraction phenomena. Practical interest in such structures arises from the possibilities they offer for tailoring photon modes, and thereby the char...

    journal_title:Nature

    pub_type: 杂志文章

    doi:10.1038/35038026

    authors: Pier H,Kapon E,Moser M

    更新日期:2000-10-19 00:00:00

  • Human cyclin A is adenovirus E1A-associated protein p60 and behaves differently from cyclin B.

    abstract::CYCLINS are proteins synthesized during each cell cycle and abruptly destroyed in each mitosis. Cyclins have been implicated in the induction of mitosis and are associated with the serine-threonine protein kinase p34cdc2 as components of mitosis promoting factor (MPF). On the basis of conserved sequence motifs cyclins...

    journal_title:Nature

    pub_type: 杂志文章

    doi:10.1038/346760a0

    authors: Pines J,Hunter T

    更新日期:1990-08-23 00:00:00

  • Evolution of the global phosphorus cycle.

    abstract::The macronutrient phosphorus is thought to limit primary productivity in the oceans on geological timescales. Although there has been a sustained effort to reconstruct the dynamics of the phosphorus cycle over the past 3.5 billion years, it remains uncertain whether phosphorus limitation persisted throughout Earth's h...

    journal_title:Nature

    pub_type: 历史文章,杂志文章

    doi:10.1038/nature20772

    authors: Reinhard CT,Planavsky NJ,Gill BC,Ozaki K,Robbins LJ,Lyons TW,Fischer WW,Wang C,Cole DB,Konhauser KO

    更新日期:2017-01-19 00:00:00

  • Recent global-warming hiatus tied to equatorial Pacific surface cooling.

    abstract::Despite the continued increase in atmospheric greenhouse gas concentrations, the annual-mean global temperature has not risen in the twenty-first century, challenging the prevailing view that anthropogenic forcing causes climate warming. Various mechanisms have been proposed for this hiatus in global warming, but thei...

    journal_title:Nature

    pub_type: 历史文章,杂志文章

    doi:10.1038/nature12534

    authors: Kosaka Y,Xie SP

    更新日期:2013-09-19 00:00:00

  • Cross-neutralization of influenza A viruses mediated by a single antibody loop.

    abstract::Immune recognition of protein antigens relies on the combined interaction of multiple antibody loops, which provide a fairly large footprint and constrain the size and shape of protein surfaces that can be targeted. Single protein loops can mediate extremely high-affinity binding, but it is unclear whether such a mech...

    journal_title:Nature

    pub_type: 杂志文章

    doi:10.1038/nature11414

    authors: Ekiert DC,Kashyap AK,Steel J,Rubrum A,Bhabha G,Khayat R,Lee JH,Dillon MA,O'Neil RE,Faynboym AM,Horowitz M,Horowitz L,Ward AB,Palese P,Webby R,Lerner RA,Bhatt RR,Wilson IA

    更新日期:2012-09-27 00:00:00

  • Controlled growth factor release from synthetic extracellular matrices.

    abstract::Polymeric matrices can be used to grow new tissues and organs, and the delivery of growth factors from these matrices is one method to regenerate tissues. A problem with engineering tissues that exist in a mechanically dynamic environment, such as bone, muscle and blood vessels, is that most drug delivery systems have...

    journal_title:Nature

    pub_type: 杂志文章

    doi:10.1038/35050141

    authors: Lee KY,Peters MC,Anderson KW,Mooney DJ

    更新日期:2000-12-21 00:00:00