Tracking the establishment of local endemic populations of an emergent enteric pathogen.

Abstract:

:Shigella sonnei is a human-adapted pathogen that is emerging globally as the dominant agent of bacterial dysentery. To investigate local establishment, we sequenced the genomes of 263 Vietnamese S. sonnei isolated over 15 y. Our data show that S. sonnei was introduced into Vietnam in the 1980s and has undergone localized clonal expansion, punctuated by genomic fixation events through periodic selective sweeps. We uncover geographical spread, spatially restricted frontier populations, and convergent evolution through local gene pool sampling. This work provides a unique, high-resolution insight into the microevolution of a pioneering human pathogen during its establishment in a new host population.

authors

Holt KE,Thieu Nga TV,Thanh DP,Vinh H,Kim DW,Vu Tra MP,Campbell JI,Hoang NV,Vinh NT,Minh PV,Thuy CT,Nga TT,Thompson C,Dung TT,Nhu NT,Vinh PV,Tuyet PT,Phuc HL,Lien NT,Phu BD,Ai NT,Tien NM,Dong N,Parry CM,Hie

doi

10.1073/pnas.1308632110

subject

Has Abstract

pub_date

2013-10-22 00:00:00

pages

17522-7

issue

43

eissn

0027-8424

issn

1091-6490

pii

1308632110

journal_volume

110

pub_type

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