Development of a fast, simple profiling method for sample screening using high resolution melting (HRM) of STRs.

Abstract:

:A screening assay has been developed to provide preliminary individualization of crime scene samples thus eliminating expensive, time-consuming short tandem repeat (STR) profiling of nonprobative samples. High resolution melting performed in a real-time PCR instrument is used to detect the slight melting differences between the length and sequence variations of 22 forensic STRs. Three STRs (vWA, D18S51, THO1) were chosen to develop an assay which was optimized for Mg++ concentration, annealing/extension time/temperature, assay volume, and bovine serum albumin addition. The assay was tested for reproducibility, uniformity for genotype, melting profile consistency, effects of inhibitors, and mixture effects. The assay could be used to determine DNA concentration when a standard curve is run simultaneously. Calculations of costs show that the assay can save significant time and money for a crime with many samples or suspects.

journal_name

J Forensic Sci

authors

Nicklas JA,Noreault-Conti T,Buel E

doi

10.1111/j.1556-4029.2011.01981.x

subject

Has Abstract

pub_date

2012-03-01 00:00:00

pages

478-88

issue

2

eissn

0022-1198

issn

1556-4029

journal_volume

57

pub_type

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