Massively Parallel Sequencing of Forensic STRs Using the Ion Chef™ and the Ion S5™ XL Systems.

Abstract:

:Next-generation sequencing (NGS) has been used to genotype forensic short tandem repeat (STR) markers for individual identification and kinship analysis. STR data from several NGS platforms have been published, but forensic application trials using the Ion S5™ XL system have not been reported. In this work, we report sensitivity, reproducibility, mixture, simulated degradation, and casework sample data on the Ion Chef™ and S5™ XL systems using an early access 25-plex panel. Sensitivity experiments showed that over 97% of the alleles were detectable with down to 62 pg input of genomic DNA. In mixture studies, alleles from minor contributors were correctly assigned at 1:9 and 9:1 ratios. NGS successfully gave 12 full genotype results from 13 challenging casework samples, compared with five full results using the CE platform. In conclusion, the Ion Chef™ and the Ion S5™ XL systems provided an alternative and promising approach for forensic STR genotyping.

journal_name

J Forensic Sci

authors

Wang L,Chen M,Wu B,Liu YC,Zhang GF,Jiang L,Xu XL,Zhao XC,Ji AQ,Ye J

doi

10.1111/1556-4029.13767

subject

Has Abstract

pub_date

2018-11-01 00:00:00

pages

1692-1703

issue

6

eissn

0022-1198

issn

1556-4029

journal_volume

63

pub_type

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