Sum rules and determination of exciton coupling using absorption and circular dichroism spectra of biological polymers.

Abstract:

:Optical spectra of biological polymers contain important information about their structure and function in living organisms. This information can be accessed by extracting an optical interaction of monomers, i.e., their exciton coupling, from experimental data. This coupling is sensitive to molecular structure, geometry, and conformation and can be used to characterize them. However, the accurate determination of exciton coupling in important biological molecules is difficult because inhomogeneous broadening smears out the monomer interaction. We suggest a way to overcome this problem by applying exact sum rules. These sum rules are derived by establishing a straightforward relationship between integral characteristics of absorption and circular dicroism spectra, and exciton coupling. Exciton coupling between AT pairs in native DNA conformation is estimated by applying these sum rules to DNA hairpin optical spectra as V(0) approximately 0.035 eV in agreement with the earlier numerical calculations.

authors

Burin AL,Armbruster ME,Hariharan M,Lewis FD

doi

10.1073/pnas.0808513106

subject

Has Abstract

pub_date

2009-01-27 00:00:00

pages

989-94

issue

4

eissn

0027-8424

issn

1091-6490

pii

0808513106

journal_volume

106

pub_type

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