Gene expression patterns in visual cortex during the critical period: synaptic stabilization and reversal by visual deprivation.

Abstract:

:The mapping of eye-specific, geniculocortical inputs to primary visual cortex (V1) is highly sensitive to the balance of correlated activity between the two eyes during a restricted postnatal critical period for ocular dominance plasticity. This critical period is likely to have amplified expression of genes and proteins that mediate synaptic plasticity. DNA microarray analysis of transcription in mouse V1 before, during, and after the critical period identified 31 genes that were up-regulated and 22 that were down-regulated during the critical period. The highest-ranked up-regulated gene, cardiac troponin C, codes for a neuronal calcium-binding protein that regulates actin binding and whose expression is activity-dependent and relatively selective for layer-4 star pyramidal neurons. The highest-ranked down-regulated gene, synCAM, also has actin-based function. Actin-binding function, G protein signaling, transcription, and myelination are prominently represented in the critical period transcriptome. Monocular deprivation during the critical period reverses the expression of nearly all critical period genes. The profile of regulated genes suggests that synaptic stability is a principle driver of critical period gene expression and that alteration in visual activity drives homeostatic restoration of stability.

authors

Lyckman AW,Horng S,Leamey CA,Tropea D,Watakabe A,Van Wart A,McCurry C,Yamamori T,Sur M

doi

10.1073/pnas.0710172105

subject

Has Abstract

pub_date

2008-07-08 00:00:00

pages

9409-14

issue

27

eissn

0027-8424

issn

1091-6490

pii

0710172105

journal_volume

105

pub_type

杂志文章
  • Modulation of transmission gain by protons at the photoreceptor output synapse.

    abstract::Synaptic transmission of the light response from photoreceptors to second-order cells of the retina was studied with the whole-cell patch-clamp technique in tiger salamander (Ambystoma tigrinum) retinal slices. Synaptic strength is modulated by extracellular pH in a striking manner: Light-sensitive postsynaptic curren...

    journal_title:Proceedings of the National Academy of Sciences of the United States of America

    pub_type: 杂志文章

    doi:10.1073/pnas.90.21.10081

    authors: Barnes S,Merchant V,Mahmud F

    更新日期:1993-11-01 00:00:00

  • Intimate bacterial-fungal interaction triggers biosynthesis of archetypal polyketides in Aspergillus nidulans.

    abstract::Fungi produce numerous low molecular weight molecules endowed with a multitude of biological activities. However, mining the full-genome sequences of fungi indicates that their potential to produce secondary metabolites is greatly underestimated. Because most of the biosynthesis gene clusters are silent under laborato...

    journal_title:Proceedings of the National Academy of Sciences of the United States of America

    pub_type: 杂志文章

    doi:10.1073/pnas.0901870106

    authors: Schroeckh V,Scherlach K,Nützmann HW,Shelest E,Schmidt-Heck W,Schuemann J,Martin K,Hertweck C,Brakhage AA

    更新日期:2009-08-25 00:00:00

  • Evolution of sociality in a primitively eusocial lineage of bees.

    abstract::Eusociality is a major evolutionary innovation involving alterations in life history, morphology, and behavior. Advanced eusocial insects, such as ants, termites, and corbiculate bees, cannot provide insights into the earliest stages of eusocial evolution because eusociality in these taxa evolved long ago (in the Cret...

    journal_title:Proceedings of the National Academy of Sciences of the United States of America

    pub_type: 杂志文章

    doi:10.1073/pnas.012387999

    authors: Danforth BN

    更新日期:2002-01-08 00:00:00

  • Heterogeneity of long-history migration explains cultural differences in reports of emotional expressivity and the functions of smiles.

    abstract::A small number of facial expressions may be universal in that they are produced by the same basic affective states and recognized as such throughout the world. However, other aspects of emotionally expressive behavior vary widely across culture. Just why do they vary? We propose that some cultural differences in expre...

    journal_title:Proceedings of the National Academy of Sciences of the United States of America

    pub_type: 杂志文章

    doi:10.1073/pnas.1413661112

    authors: Rychlowska M,Miyamoto Y,Matsumoto D,Hess U,Gilboa-Schechtman E,Kamble S,Muluk H,Masuda T,Niedenthal PM

    更新日期:2015-05-12 00:00:00

  • IL-10 directly suppresses CD4 but not CD8 T cell effector and memory responses following acute viral infection.

    abstract::Mounting effective T cell responses is critical for eliciting long-lasting immunity following viral infection and vaccination. A multitude of inhibitory and stimulatory factors are induced following infection, and it is the compilation of these signals that quantitatively and qualitatively program the ensuing effector...

    journal_title:Proceedings of the National Academy of Sciences of the United States of America

    pub_type: 杂志文章

    doi:10.1073/pnas.0914500107

    authors: Brooks DG,Walsh KB,Elsaesser H,Oldstone MB

    更新日期:2010-02-16 00:00:00

  • Expression of tandem gene duplicates is often greater than twofold.

    abstract::Tandem gene duplication is an important mutational process in evolutionary adaptation and human disease. Hypothetically, two tandem gene copies should produce twice the output of a single gene, but this expectation has not been rigorously investigated. Here, we show that tandem duplication often results in more than d...

    journal_title:Proceedings of the National Academy of Sciences of the United States of America

    pub_type: 杂志文章

    doi:10.1073/pnas.1605886113

    authors: Loehlin DW,Carroll SB

    更新日期:2016-05-24 00:00:00

  • African trypanosomes expressing multiple VSGs are rapidly eliminated by the host immune system.

    abstract::Trypanosoma brucei parasites successfully evade the host immune system by periodically switching the dense coat of variant surface glycoprotein (VSG) at the cell surface. Each parasite expresses VSGs in a monoallelic fashion that is tightly regulated. The consequences of exposing multiple VSGs during an infection, in ...

    journal_title:Proceedings of the National Academy of Sciences of the United States of America

    pub_type: 杂志文章

    doi:10.1073/pnas.1905120116

    authors: Aresta-Branco F,Sanches-Vaz M,Bento F,Rodrigues JA,Figueiredo LM

    更新日期:2019-10-08 00:00:00

  • The structure of chromatin.

    abstract::The DNA in chromatin of isolated thymus nuclei, and in two different preparations of deoxyribonucleoprotein extracted from chromatin, has been digested with DNase. By variation of the time of reaction and the concentration of enzyme, and by comparison of the action of the enzyme on (protein-free) DNA with its action o...

    journal_title:Proceedings of the National Academy of Sciences of the United States of America

    pub_type: 杂志文章

    doi:10.1073/pnas.68.12.2945

    authors: Mirsky AE

    更新日期:1971-12-01 00:00:00

  • Sample multiplexing for targeted pathway proteomics in aging mice.

    abstract::Pathway proteomics strategies measure protein expression changes in specific cellular processes that carry out related functions. Using targeted tandem mass tags-based sample multiplexing, hundreds of proteins can be quantified across 10 or more samples simultaneously. To facilitate these highly complex experiments, w...

    journal_title:Proceedings of the National Academy of Sciences of the United States of America

    pub_type: 杂志文章

    doi:10.1073/pnas.1919410117

    authors: Yu Q,Xiao H,Jedrychowski MP,Schweppe DK,Navarrete-Perea J,Knott J,Rogers J,Chouchani ET,Gygi SP

    更新日期:2020-05-05 00:00:00

  • Evolution of compensatory substitutions through G.U intermediate state in Drosophila rRNA.

    abstract::It has often been suggested that the frequently observed Watson-Crick base-pair compensatory substitutions in RNA helical structures occur mainly through a slightly deleterious G.U intermediate state. We have scored base substitutions in a set of 82 related Drosophila species for the D1 and D2 variable domains of the ...

    journal_title:Proceedings of the National Academy of Sciences of the United States of America

    pub_type: 杂志文章

    doi:10.1073/pnas.88.22.10032

    authors: Rousset F,Pélandakis M,Solignac M

    更新日期:1991-11-15 00:00:00

  • Hitchhiking and epistasis give rise to cohort dynamics in adapting populations.

    abstract::Beneficial mutations are the driving force of adaptive evolution. In asexual populations, the identification of beneficial alleles is confounded by the presence of genetically linked hitchhiker mutations. Parallel evolution experiments enable the recognition of common targets of selection; yet these targets are inhere...

    journal_title:Proceedings of the National Academy of Sciences of the United States of America

    pub_type: 杂志文章

    doi:10.1073/pnas.1702314114

    authors: Buskirk SW,Peace RE,Lang GI

    更新日期:2017-08-01 00:00:00

  • Reversal of hyperglycemia in diabetic mouse models using induced-pluripotent stem (iPS)-derived pancreatic beta-like cells.

    abstract::Diabetes mellitus is characterized by either the inability to produce insulin (type 1 diabetes) or as insensitivity to insulin secreted by the body (type 2 diabetes). In either case, the body is unable to move blood glucose efficiently across cell membranes to be used. This leads to a variety of local and systemic det...

    journal_title:Proceedings of the National Academy of Sciences of the United States of America

    pub_type: 杂志文章

    doi:10.1073/pnas.1007884107

    authors: Alipio Z,Liao W,Roemer EJ,Waner M,Fink LM,Ward DC,Ma Y

    更新日期:2010-07-27 00:00:00

  • Flow of information in the light-triggered cyclic nucleotide cascade of vision.

    abstract::Photolyzed rhodopsin catalyzes the exchange of GTP for FDP bound to a protein in retinal rod outer segments. We previously proposed that the GTP complex of this protein regulates the cyclic GMP phosphodiesterase and that it may be the first amplified intermediate in visual excitation [Fung, B. K.-K. & Stryer, L. (1980...

    journal_title:Proceedings of the National Academy of Sciences of the United States of America

    pub_type: 杂志文章

    doi:10.1073/pnas.78.1.152

    authors: Fung BK,Hurley JB,Stryer L

    更新日期:1981-01-01 00:00:00

  • Geometric interpretation of vertex operator algebras.

    abstract::In this paper, Vafa's approach to the formulation of conformal field theories is combined with the formal calculus developed in Frenkel, Lepowsky, and Meurman's work on the vertex operator construction of the Monster to give a geometric definition of vertex operator algebras. The main result announced is the equivalen...

    journal_title:Proceedings of the National Academy of Sciences of the United States of America

    pub_type: 杂志文章

    doi:10.1073/pnas.88.22.9964

    authors: Huang YZ

    更新日期:1991-11-15 00:00:00

  • Potent inhibition of huntingtin aggregation and cytotoxicity by a disulfide bond-free single-domain intracellular antibody.

    abstract::Huntington's disease (HD) is a progressive neurodegenerative disorder caused by an expansion in the number of polyglutamine-encoding CAG repeats in the gene that encodes the huntingtin (htt) protein. A property of the mutant protein that is intimately involved in the development of the disease is the propensity of the...

    journal_title:Proceedings of the National Academy of Sciences of the United States of America

    pub_type: 杂志文章

    doi:10.1073/pnas.0408134101

    authors: Colby DW,Chu Y,Cassady JP,Duennwald M,Zazulak H,Webster JM,Messer A,Lindquist S,Ingram VM,Wittrup KD

    更新日期:2004-12-21 00:00:00

  • RNA interference rescue by bacterial artificial chromosome transgenesis in mammalian tissue culture cells.

    abstract::RNA interference (RNAi) is a widely used method for analysis of gene function in tissue culture cells. However, to date there has been no reliable method for testing the specificity of any particular RNAi experiment. The ideal experiment is to rescue the phenotype by expression of the target gene in a form refractory ...

    journal_title:Proceedings of the National Academy of Sciences of the United States of America

    pub_type: 杂志文章

    doi:10.1073/pnas.0409861102

    authors: Kittler R,Pelletier L,Ma C,Poser I,Fischer S,Hyman AA,Buchholz F

    更新日期:2005-02-15 00:00:00

  • O-acetylation of a cell-surface carbohydrate creates discrete molecular patterns during neural development.

    abstract::The cell-surface antigen detected by the monoclonal antibody JONES is expressed in the retina and a number of other central nervous system regions of the rat during the latter part of embryonic development and the early postnatal period. In addition to the expression on certain neuroblast populations it is found on so...

    journal_title:Proceedings of the National Academy of Sciences of the United States of America

    pub_type: 杂志文章

    doi:10.1073/pnas.84.23.8716

    authors: Blum AS,Barnstable CJ

    更新日期:1987-12-01 00:00:00

  • pH-dependent transition between delocalized and trapped valence states of a CuA center and its possible role in proton-coupled electron transfer.

    abstract::A pH-dependent transition between delocalized and trapped mixed valence states of an engineered CuA center in azurin has been investigated by UV-visible absorption and electron paramagnetic resonance spectroscopic techniques. At pH 7.0, the CuA azurin displays a typical delocalized mixed valence dinuclear [Cu(1.5).......

    journal_title:Proceedings of the National Academy of Sciences of the United States of America

    pub_type: 杂志文章

    doi:10.1073/pnas.0403473101

    authors: Hwang HJ,Lu Y

    更新日期:2004-08-31 00:00:00

  • International population movements and regional Plasmodium falciparum malaria elimination strategies.

    abstract::Calls for the eradication of malaria require the development of global and regional strategies based on a strong and consistent evidence base. Evidence from the previous global malaria eradication program and more recent transborder control campaigns have shown the importance of accounting for human movement in introd...

    journal_title:Proceedings of the National Academy of Sciences of the United States of America

    pub_type: 杂志文章

    doi:10.1073/pnas.1002971107

    authors: Tatem AJ,Smith DL

    更新日期:2010-07-06 00:00:00

  • Mitochondrial creatine kinase: a major constituent of pathological inclusions seen in mitochondrial myopathies.

    abstract::Overaccumulation of abnormally organized mitochondria in so-called "ragged-red" skeletal muscle fibers is a morphological hallmark of mitochondrial myopathies, in particular of mitochondrial encephalomyopathies. Characteristic for the abnormal mitochondria is the occurrence of highly ordered crystalline inclusions. Im...

    journal_title:Proceedings of the National Academy of Sciences of the United States of America

    pub_type: 杂志文章

    doi:10.1073/pnas.91.11.5089

    authors: Stadhouders AM,Jap PH,Winkler HP,Eppenberger HM,Wallimann T

    更新日期:1994-05-24 00:00:00

  • Forming giant vesicles with controlled membrane composition, asymmetry, and contents.

    abstract::Growing knowledge of the key molecular components involved in biological processes such as endocytosis, exocytosis, and motility has enabled direct testing of proposed mechanistic models by reconstitution. However, current techniques for building increasingly complex cellular structures and functions from purified com...

    journal_title:Proceedings of the National Academy of Sciences of the United States of America

    pub_type: 杂志文章

    doi:10.1073/pnas.1016410108

    authors: Richmond DL,Schmid EM,Martens S,Stachowiak JC,Liska N,Fletcher DA

    更新日期:2011-06-07 00:00:00

  • New model to explain tooth wear with implications for microwear formation and diet reconstruction.

    abstract::Paleoanthropologists and vertebrate paleontologists have for decades debated the etiology of tooth wear and its implications for understanding the diets of human ancestors and other extinct mammals. The debate has recently taken a twist, calling into question the efficacy of dental microwear to reveal diet. Some argue...

    journal_title:Proceedings of the National Academy of Sciences of the United States of America

    pub_type: 杂志文章

    doi:10.1073/pnas.1509491112

    authors: Xia J,Zheng J,Huang D,Tian ZR,Chen L,Zhou Z,Ungar PS,Qian L

    更新日期:2015-08-25 00:00:00

  • Organic-mineral interfacial chemistry drives heterogeneous nucleation of Sr-rich (Ba x , Sr1-x )SO4 from undersaturated solution.

    abstract::Sr-bearing marine barite [(Ba x , Sr1-x )SO4] cycling has been widely used to reconstruct geochemical evolutions of paleoenvironments. However, an understanding of barite precipitation in the ocean, which is globally undersaturated with respect to barite, is missing. Moreo...

    journal_title:Proceedings of the National Academy of Sciences of the United States of America

    pub_type: 杂志文章

    doi:10.1073/pnas.1821065116

    authors: Deng N,Stack AG,Weber J,Cao B,De Yoreo JJ,Hu Y

    更新日期:2019-07-02 00:00:00

  • Monoclonal antibodies reveal receptor specificity among G-protein-coupled receptor kinases.

    abstract::Guanine nucleotide-binding regulatory protein (G protein)-coupled receptor kinases (GRKs) constitute a family of serine/threonine kinases that play a major role in the agonist-induced phosphorylation and desensitization of G-protein-coupled receptors. Herein we describe the generation of monoclonal antibodies (mAbs) t...

    journal_title:Proceedings of the National Academy of Sciences of the United States of America

    pub_type: 杂志文章

    doi:10.1073/pnas.93.15.7649

    authors: Oppermann M,Diversé-Pierluissi M,Drazner MH,Dyer SL,Freedman NJ,Peppel KC,Lefkowitz RJ

    更新日期:1996-07-23 00:00:00

  • COVID-19 lockdown induces disease-mitigating structural changes in mobility networks.

    abstract::In the wake of the COVID-19 pandemic many countries implemented containment measures to reduce disease transmission. Studies using digital data sources show that the mobility of individuals was effectively reduced in multiple countries. However, it remains unclear whether these reductions caused deeper structural chan...

    journal_title:Proceedings of the National Academy of Sciences of the United States of America

    pub_type: 杂志文章

    doi:10.1073/pnas.2012326117

    authors: Schlosser F,Maier BF,Jack O,Hinrichs D,Zachariae A,Brockmann D

    更新日期:2020-12-29 00:00:00

  • Hydrogen sulfide mediates the vasoactivity of garlic.

    abstract::The consumption of garlic is inversely correlated with the progression of cardiovascular disease, although the responsible mechanisms remain unclear. Here we show that human RBCs convert garlic-derived organic polysulfides into hydrogen sulfide (H(2)S), an endogenous cardioprotective vascular cell signaling molecule. ...

    journal_title:Proceedings of the National Academy of Sciences of the United States of America

    pub_type: 杂志文章

    doi:10.1073/pnas.0705710104

    authors: Benavides GA,Squadrito GL,Mills RW,Patel HD,Isbell TS,Patel RP,Darley-Usmar VM,Doeller JE,Kraus DW

    更新日期:2007-11-13 00:00:00

  • Chronic disability trends in elderly United States populations: 1982-1994.

    abstract::Statistically significant declines in chronic disability prevalence rates were observed in the elderly United States population between the 1982 and 1989 National Long Term Care Surveys (NLTCS). The 1994 NLTCS was used to investigate whether disability rate declines continued to 1994. The 1982, 1984, 1989, and 1994 NL...

    journal_title:Proceedings of the National Academy of Sciences of the United States of America

    pub_type: 杂志文章

    doi:10.1073/pnas.94.6.2593

    authors: Manton KG,Corder L,Stallard E

    更新日期:1997-03-18 00:00:00

  • Reversible growth arrest in simian virus 40-transformed human fibroblasts.

    abstract::A reversible growth arrest of simian virus 40-transformed human fibroblasts has been produced by replacement of methionine in the growth medium by its immediate metabolic precursor, homocysteine, Although these arrested cells exhibit a greatly reduced cloning efficiency when plated in methionine-supplemented medium, t...

    journal_title:Proceedings of the National Academy of Sciences of the United States of America

    pub_type: 杂志文章

    doi:10.1073/pnas.77.12.7306

    authors: Hoffman RM,Jacobsen SJ

    更新日期:1980-12-01 00:00:00

  • Protein-binding dynamics imaged in a living cell.

    abstract::Historically, rate constants were determined in vitro and it was unknown whether they were valid for in vivo biological processes. Here, we bridge this gap by measuring binding dynamics between a pair of proteins in living HeLa cells. Binding of a β-lactamase to its protein inhibitor was initiated by microinjection an...

    journal_title:Proceedings of the National Academy of Sciences of the United States of America

    pub_type: 杂志文章

    doi:10.1073/pnas.1112171109

    authors: Phillip Y,Kiss V,Schreiber G

    更新日期:2012-01-31 00:00:00

  • Nanobacteria-like calcite single crystals at the surface of the Tataouine meteorite.

    abstract::Nanobacteria-like objects evidenced at the surface of the orthopyroxenes of the Tataouine meteorite in South Tunisia have been studied by scanning and transmission electron microscopies. A method of micromanipulation has been developed to ensure that exactly the same objects were studied by both methods. We have shown...

    journal_title:Proceedings of the National Academy of Sciences of the United States of America

    pub_type: 杂志文章

    doi:10.1073/pnas.0832464100

    authors: Benzerara K,Menguy N,Guyot F,Dominici C,Gillet P

    更新日期:2003-06-24 00:00:00