Synergistic effect of TRM2/RNC1 and EXO1 in DNA double-strand break repair in Saccharomyces cerevisiae.

Abstract:

:In our recently published study, we provided in vitro as well as in vivo data demonstrating the involvement of TRM2/RNC1 in homologous recombination based repair (HRR) of DNA double strand breaks (DSBs), in support of such claims reported earlier. To further validate its role in DNA DSB processing, our present study revealed that the trm2 single mutant displays higher sensitivity to persistent induction of specific DSBs at the MAT locus by HO-endonuclease with higher sterility rate among the survivors compared to wild type (wt) or exo1 single mutants. Intriguingly, both sensitivity and sterility rate increased dramatically in trm2exo1 double mutants lacking both endo-exonucleases with a progressively increased sterility rate in trm2exo1 double mutants with short-induction periods, reaching a very high level of sterility with persistent DSB inductions. Mutation analysis of the mating type (MAT) locus among the sterile survivors with persistent HO-induction in trm2 and exo1 single mutants as well as in trm2exo1 double mutants revealed a similar small insertions and deletions events, characteristic of non-homologous end joining (NHEJ) that might have occurred due to the lack of proper processing function in these mutants. In addition, trm2ku80 and trm2rad52 double mutants also displayed significantly higher sterility with persistent DSB induction compared to ku80 and rad52 single mutants, respectively, exhibiting a mutation spectra that shifted from base substitution (in ku80 and rad52 single mutants) to small insertions and deletions in the double mutants (in trm2ku80 and trm2rad52 mutants). These data indicate a defective processing in absence of TRM2, with a synergistic effect of TRM2, and EXO1 in such processing.

journal_name

Mol Cell Biochem

authors

Choudhury SA,Asefa B,Kauler P,Chow TY

doi

10.1007/s11010-007-9493-7

subject

Has Abstract

pub_date

2007-10-01 00:00:00

pages

127-34

issue

1-2

eissn

0300-8177

issn

1573-4919

journal_volume

304

pub_type

杂志文章
  • Decreased BMP2 signal in GIT1 knockout mice slows bone healing.

    abstract::Endochondral ossification, an important stage of fracture healing, is regulated by a variety of signaling pathways. Transforming growth factor β (TGFβ) superfamily plays important roles and comprises TGFβs, bone morphogenetic proteins (BMPs), and growth differentiation factors. TGFβs primarily regulate cartilage forma...

    journal_title:Molecular and cellular biochemistry

    pub_type: 杂志文章

    doi:10.1007/s11010-014-2173-5

    authors: Sheu TJ,Zhou W,Fan J,Zhou H,Zuscik MJ,Xie C,Yin G,Berk BC

    更新日期:2014-12-01 00:00:00

  • The m6A methyltransferase METTL3 cooperates with demethylase ALKBH5 to regulate osteogenic differentiation through NF-κB signaling.

    abstract::As a m6A methylation modifier, METTL3 is functionally involved in various biological processes. Nevertheless, the role of METTL3 in osteogenesis is not determined up to date. In the current study, METTL3 is identified as a crucial regulator in the progression of osteogenic differentiation. Loss of METTL3 significantly...

    journal_title:Molecular and cellular biochemistry

    pub_type: 杂志文章

    doi:10.1007/s11010-019-03641-5

    authors: Yu J,Shen L,Liu Y,Ming H,Zhu X,Chu M,Lin J

    更新日期:2020-01-01 00:00:00

  • Characteristics of fatty acid-binding proteins and their relation to mammary-derived growth inhibitor.

    abstract::Based on sequence relationships the cytoplasmic fatty acid-binding proteins (FABPs) of mammalian origin are divided into at least three distinct types, namely the hepatic-, intestinal- and cardiac-type. Highly conserved sequences of FABPs within the same type correlate with immunological crossreactivities. Isoforms of...

    journal_title:Molecular and cellular biochemistry

    pub_type: 杂志文章,评审

    doi:10.1007/BF00231368

    authors: Spener F,Unterberg C,Börchers T,Grosse R

    更新日期:1990-10-15 00:00:00

  • Ataxia telangiectasia mutated kinase plays a protective role in β-adrenergic receptor-stimulated cardiac myocyte apoptosis and myocardial remodeling.

    abstract::β-Adrenergic receptor (β-AR) stimulation induces cardiac myocyte apoptosis and plays an important role in myocardial remodeling. Here we investigated expression of various apoptosis-related genes affected by β-AR stimulation, and examined first time the role of ataxia telangiectasia mutated kinase (ATM) in cardiac myo...

    journal_title:Molecular and cellular biochemistry

    pub_type: 杂志文章

    doi:10.1007/s11010-011-0769-6

    authors: Foster CR,Singh M,Subramanian V,Singh K

    更新日期:2011-07-01 00:00:00

  • Epigenetic memory: gene writer, eraser and homocysteine.

    abstract::Naturally chromatin remodeling is highly organized, consisting of histone acetylation (opening/relaxation of the compact chromatin structure), DNA methylation (inhibition of the gene expression activity) and sequence rearrangement by shifting. All this is essentially required for proper "in-printing and off-printing" ...

    journal_title:Molecular and cellular biochemistry

    pub_type: 杂志文章,评审

    doi:10.1007/s11010-020-03895-4

    authors: Tyagi SC,Stanisic D,Singh M

    更新日期:2020-10-08 00:00:00

  • Phagocytosis-promoting activity of avian plasma and fibroblastic cell surface fibronectins.

    abstract::The purpose of this investigation was to determine whether fibronectin preparations from both chicken plasma and cell surface of fibroblasts can promote phagocytosis of gelatin-coated latex particles. Chicken plasma fibronectin was isolated (a) by ammonium sulfate fractionation, chromatography on Sepharose-4B followed...

    journal_title:Molecular and cellular biochemistry

    pub_type: 杂志文章

    doi:10.1007/BF02357031

    authors: Marquette D,Molnar J,Yamada K,Schlesinger D,Darby S,Van Alten P

    更新日期:1981-05-26 00:00:00

  • Caveolin-1 sensitizes cisplatin-induced lung cancer cell apoptosis via superoxide anion-dependent mechanism.

    abstract::Caveolin-1 (Cav-1) expression frequently found in lung cancer was linked with disease prognosis and progression. This study reveals for the first time that Cav-1 sensitizes cisplatin-induced lung carcinoma cell death by the mechanism involving oxidative stress modulation. We established stable Cav-1 overexpressed (H46...

    journal_title:Molecular and cellular biochemistry

    pub_type: 杂志文章

    doi:10.1007/s11010-011-0988-x

    authors: Pongjit K,Chanvorachote P

    更新日期:2011-12-01 00:00:00

  • A model for the interaction of wheat monomeric and dimeric protein inhibitors with alpha-amylase.

    abstract::The amylase-protein amylase inhibitor system offers a unique model of specific and reversilbe protein-protein interaction. The monomeric and dimeric inhibitors, exhibiting closely related properties and interacting with the same amylase, also provide a convenient test to compare effects of monomer-monomer and monomer-...

    journal_title:Molecular and cellular biochemistry

    pub_type: 杂志文章

    doi:10.1007/BF00280273

    authors: Silano V,Poerio E,Buonocore V

    更新日期:1977-12-29 00:00:00

  • EZH2 promotes cell proliferation by regulating the expression of RUNX3 in laryngeal carcinoma.

    abstract::Enhancer of zeste homolog 2 (EZH2) is a highly conserved histone methyltransferase, which is overexpressed in different types of cancers such as breast and prostate cancer. It is reported that EZH2 can directly down-regulate RUNX3 by increasing histone H3 methylation. However, the role of EZH2 in the development and p...

    journal_title:Molecular and cellular biochemistry

    pub_type: 杂志文章

    doi:10.1007/s11010-017-3133-7

    authors: Lian R,Ma H,Wu Z,Zhang G,Jiao L,Miao W,Jin Q,Li R,Chen P,Shi H,Yu W

    更新日期:2018-02-01 00:00:00

  • Downregulated hypoxia-inducible factor 1α improves myoblast differentiation under hypoxic condition in mouse genioglossus.

    abstract::The treatment of obstructive sleep apnea-hypopnea syndrome targets the narrow anatomic structure of the upper airway (UA) and lacks an effective therapy for UA dilator muscle dysfunction. Long-term hypoxia can cause damage to UA dilator muscles and trigger a vicious cycle. We previously confirmed that hypoxia-inducibl...

    journal_title:Molecular and cellular biochemistry

    pub_type: 杂志文章

    doi:10.1007/s11010-020-03995-1

    authors: Lu Y,Mao J,Han X,Zhang W,Li Y,Liu Y,Li Q

    更新日期:2021-01-03 00:00:00

  • Role of antioxidant systems, lipid peroxidation, and nitric oxide in postmenopausal osteoporosis.

    abstract::In this study we assessed activities of antioxidant enzymes, lipid peroxidation end-products, and nitric oxide (NO) levels in women with postmenopausal osteoporosis (PMO). Relationship between oxidative stress parameters and NO levels with bone mineral density (BMD) and clinical variables influencing bone mass and hea...

    journal_title:Molecular and cellular biochemistry

    pub_type: 杂志文章

    doi:10.1007/s11010-006-9270-z

    authors: Ozgocmen S,Kaya H,Fadillioglu E,Aydogan R,Yilmaz Z

    更新日期:2007-01-01 00:00:00

  • Ischaemic preconditioning in the rat heart: the role of G-proteins and adrenergic stimulation.

    abstract:UNLABELLED:Since recent findings indicate the involvement of G-proteins in the mechanism of ischaemic preconditioning (PC), the present study was aimed to investigate the role of adrenergic mechanisms, such as G-proteins and stimulation of adrenergic receptors, in this phenomenon. For this purpose, isolated Langendorff...

    journal_title:Molecular and cellular biochemistry

    pub_type: 杂志文章

    doi:10.1007/BF00944792

    authors: Ravingerová T,Pyne NJ,Parratt JR

    更新日期:1995-06-07 00:00:00

  • Glycyrrhizin ameliorates metabolic syndrome-induced liver damage in experimental rat model.

    abstract::Glycyrrhizin, a major constituent of licorice (Glycyrrhiza glabra) root, has been reported to ameliorate insulin resistance, hyperglycemia, dyslipidemia, and obesity in rats with metabolic syndrome. Liver dysfunction is associated with this syndrome. The objective of this study is to investigate the effect of glycyrrh...

    journal_title:Molecular and cellular biochemistry

    pub_type: 杂志文章

    doi:10.1007/s11010-015-2523-y

    authors: Sil R,Ray D,Chakraborti AS

    更新日期:2015-11-01 00:00:00

  • Properties of Na,K-ATPase in cerebellum of male and female rats: effects of acute and prolonged diabetes.

    abstract::The present study was oriented to gender specificity of Na,K-ATPase in cerebellum, the crucial enzyme maintaining the intracellular homeostasis of Na ions in healthy and diabetic Wistar rats. The effects of diabetes on properties of the Na,K-ATPase in cerebellum derived from normal and streptozotocin (STZ)-diabetic ra...

    journal_title:Molecular and cellular biochemistry

    pub_type: 杂志文章

    doi:10.1007/s11010-016-2859-y

    authors: Kaločayová B,Mézešová L,Barteková M,Vlkovičová J,Jendruchová V,Vrbjar N

    更新日期:2017-01-01 00:00:00

  • Phosphoglucoisomerase-catalyzed interconversion of hexose phosphates. Study by 13C NMR of proton and deuteron exchange.

    abstract::The exchange of protons and deuterons by phosphoglucoisomerase during the single passage conversion of D-[2-13C,1-2H]fructose 6-phosphate in H2O or D-[2-13C]fructose 6-phosphate in D2O to D-[2-13C]glucose 6-phosphate, as coupled with the further generation of 6-phospho-D-[2-13C]gluconate in the presence of excess gluc...

    journal_title:Molecular and cellular biochemistry

    pub_type: 杂志文章

    doi:10.1007/BF00227479

    authors: Malaisse WJ,Liemans V,Malaisse-Lagae F,Ottinger R,Willem R

    更新日期:1991-05-15 00:00:00

  • Vaspin protects mouse mesenchymal stem cells from oxidative stress-induced apoptosis through the MAPK/p38 pathway.

    abstract::The aim of the work was to study the influence of vaspin on oxidative stress-induced apoptosis of mouse mesenchymal stem cells (MSCs). MSCs originated from bone marrow of C57BL/6 mouse were treated with vaspin and/or H2O2 in a dose-dependent manner. Cellular viability detected by CCK-8 and cell apoptosis studied by fl...

    journal_title:Molecular and cellular biochemistry

    pub_type: 杂志文章

    doi:10.1007/s11010-019-03614-8

    authors: Zhu X,Zhang L,Chen Y,Chen B,Huang H,Lv J,Hu S,Shen J

    更新日期:2019-12-01 00:00:00

  • Chemistry and biology of E. coli ribosomal protein L12.

    abstract::E. coli ribosomal protein L12, because of its unique features, has been studied in more detail than perhaps any of the other ribosomal proteins. Unlike the other ribosomal proteins that are generally present in stoichiometric amounts, there are four copies of L12 per ribosome, some of which are acetylated on the N-ter...

    journal_title:Molecular and cellular biochemistry

    pub_type: 杂志文章,评审

    doi:10.1007/BF02354831

    authors: Brot N,Weissbach H

    更新日期:1981-04-13 00:00:00

  • Vanillin as an antioxidant in rat liver mitochondria: inhibition of protein oxidation and lipid peroxidation induced by photosensitization.

    abstract::Using rat liver mitochondria, as model systems, we have examined the ability of the natural compound and the food-flavoring agent, vanillin to protect membranes against oxidative damage induced by photosensitization at concentrations normally used in food preparations. Vanillin, at a concentration of 2.5 mmol/L, has a...

    journal_title:Molecular and cellular biochemistry

    pub_type: 杂志文章

    doi:10.1023/a:1007048313556

    authors: Kamat JP,Ghosh A,Devasagayam TP

    更新日期:2000-06-01 00:00:00

  • Enzymatic properties of overexpressed human hexokinase fragments.

    abstract::Full-length hexokinase (HK; ATP: D-hexose 6-phosphotransferase, EC 2.7.1.1), a truncate form of the enzyme lacking the first 11 amino acids (HK-11aa) and the 50 kDa C-terminal half ('mini'-HK) containing the catalytic domain, were overexpressed and purified to homogeneity to investigate the influence of the N-terminal...

    journal_title:Molecular and cellular biochemistry

    pub_type: 杂志文章

    doi:10.1023/a:1006962217495

    authors: Bianchi M,Serafini G,Bartolucci E,Giammarini C,Magnani M

    更新日期:1998-12-01 00:00:00

  • FT-IR spectroscopy of methylmercury-exposed mouse lung.

    abstract::Infrared spectroscopy which has traditionally been utilized by chemists and physicists for characterization and identification of the structural properties of chemical compounds is now becoming more relevant as a biodiagnostic tool. Recent reports suggest that arthritis and Alzheimer's disease can be diagnosed by usin...

    journal_title:Molecular and cellular biochemistry

    pub_type: 杂志文章

    doi:10.1007/BF00925716

    authors: Das RM,Ahmed MK,Mantsch HH,Scott JE

    更新日期:1995-04-12 00:00:00

  • Typical phenotypic spectrum of velocardiofacial syndrome occurs independently of deletion size in chromosome 22q11.2.

    abstract::Velocardiofacial syndrome (VCFS) is a relatively common developmental disorder characterized by craniofacial anomalies and conotruncal heart defects. Many VCFS patients present hemizygous deletions on part of chromosome 22q11.2; suggestive that haploinsufficiency in this region is responsible for this etiology. Most 2...

    journal_title:Molecular and cellular biochemistry

    pub_type: 杂志文章

    doi:10.1007/s11010-007-9450-5

    authors: Sandrin-Garcia P,Abramides DV,Martelli LR,Ramos ES,Richieri-Costa A,Passos GA

    更新日期:2007-09-01 00:00:00

  • Properties of the sarcoplasmic reticulum Ca(2+)-pump in coronary artery skinned smooth muscle.

    abstract::Pig coronary artery cultured smooth muscle cells were skinned using saponin. In the presence of an ATP-regenerating system and oxalate, the skinned cells showed an ATP-dependent azide insensitive Ca(2+)-uptake which increased linearly with time for > 1 h. The Ca(2+)-uptake occurred with Km values of 0.20 +/- 0.03 micr...

    journal_title:Molecular and cellular biochemistry

    pub_type: 杂志文章

    doi:10.1007/BF01322337

    authors: Elmoselhi AB,Blennerhassett M,Samson SE,Grover AK

    更新日期:1995-10-18 00:00:00

  • MiR-146a negatively regulates neutrophil elastase-induced MUC5AC secretion from 16HBE human bronchial epithelial cells.

    abstract::Mucus hypersecretion is a major manifestation in patients with chronic inflammatory airway diseases, and MUC5AC protein is a major component of airway mucus. Earlier studies have demonstrated that neutrophil elastase (NE), a serine protease, mainly produced by neutrophils, stimulates the production of MUC5AC from airw...

    journal_title:Molecular and cellular biochemistry

    pub_type: 杂志文章

    doi:10.1007/s11010-011-0975-2

    authors: Zhong T,Perelman JM,Kolosov VP,Zhou XD

    更新日期:2011-12-01 00:00:00

  • The anticancer drug perillyl alcohol is a Na/K-ATPase inhibitor.

    abstract::The monoterpene perillyl alcohol (POH) is a drug used in the treatment of several malignant tumors, including gliomas. The present study defines a POH inhibitory effect on Na/K-ATPase activity from kidney and brain guinea pig extracts and from a human glioblastoma cell line. This inhibition showed a high degree of sel...

    journal_title:Molecular and cellular biochemistry

    pub_type: 杂志文章

    doi:10.1007/s11010-010-0556-9

    authors: Garcia DG,Amorim LM,de Castro Faria MV,Freire AS,Santelli RE,Da Fonseca CO,Quirico-Santos T,Burth P

    更新日期:2010-12-01 00:00:00

  • Inhibition of Helicobacter pylori in vitro by various berry extracts, with enhanced susceptibility to clarithromycin.

    abstract::The objective of this study was to evaluate the effects of various berry extracts, with and without clarithromycin on Helicobacter pylori. Resistance to clarithromycin by H. pylori has been reported, leading to interest in alternatives/adjuncts to therapy with clarithromycin. H. pylori American type culture collection...

    journal_title:Molecular and cellular biochemistry

    pub_type: 杂志文章

    doi:10.1023/b:mcbi.0000044310.92444.ec

    authors: Chatterjee A,Yasmin T,Bagchi D,Stohs SJ

    更新日期:2004-10-01 00:00:00

  • Morphological and oxidative alterations on Sertoli cells cytoskeleton due to retinol-induced reactive oxygen species.

    abstract::Retinol (vitamin A) is involved in several cellular processes, like cell division, differentiation, transformation and apoptosis. Although it has been shown that retinol is a limitant factor for all these processes, the precise mechanisms by which retinol acts are still unknown. In the present study we hypothesised th...

    journal_title:Molecular and cellular biochemistry

    pub_type: 杂志文章

    doi:10.1007/s11010-005-6339-z

    authors: de Oliveira RB,Klamt F,Castro MA,Polydoro M,Zanotto Filho A,Gelain DP,Dal-Pizzol F,Moreira JC

    更新日期:2005-03-01 00:00:00

  • CLOCK/BMAL1 regulates human nocturnin transcription through binding to the E-box of nocturnin promoter.

    abstract::Nocturnin has been identified as a clock-controlled gene based on its rhythmic expression and night-time peak of transcript level in Xenopus retina. Further studies show that the widespread expression and rhythmicity of nocturnin mRNA level parallel the expression of clock genes. In Xenopus, nocturnin transcription is...

    journal_title:Molecular and cellular biochemistry

    pub_type: 杂志文章

    doi:10.1007/s11010-008-9846-x

    authors: Li R,Yue J,Zhang Y,Zhou L,Hao W,Yuan J,Qiang B,Ding JM,Peng X,Cao JM

    更新日期:2008-10-01 00:00:00

  • Semiquinone derivative isolated from Bacillus sp. INM-1 protects cellular antioxidant enzymes from γ-radiation-induced renal toxicity.

    abstract::This study was focused to evaluate protection of indigenous antioxidant system of mice against gamma radiation-induced oxidative stress using a semiquinone (SQGD)-rich fraction isolated from Bacillus sp. INM-1. Male C57bl/6 mice were administered SQGD (50 mg/kgb.w.i.p.) 2 h before irradiation (10 Gy) and modulation in...

    journal_title:Molecular and cellular biochemistry

    pub_type: 杂志文章

    doi:10.1007/s11010-013-1622-x

    authors: Mishra S,Reddy DS,Jamwal VS,Bansal DD,Patel DD,Malhotra P,Gupta AK,Singh PK,Jawed S,Kumar R

    更新日期:2013-07-01 00:00:00

  • Stimulatory effect of calcium administration on regucalcin mRNA expression is attenuated in the kidney cortex of rats ingested with saline.

    abstract::The expression of calcium-binding protein regucalcin mRNA in the kidney cortex of rats ingested with saline was investigated. The alteration in regucalcin mRNA levels was analyzed by Northern blotting using liver regucalcin complementary DNA (0.9 kb of open reading frame). Rats were freely given saline as drinking wat...

    journal_title:Molecular and cellular biochemistry

    pub_type: 杂志文章

    doi:10.1023/a:1006898910955

    authors: Shinya N,Yamaguchi M

    更新日期:1998-01-01 00:00:00

  • Cloning and expression of PPAR-gamma and PGC-1alpha from the hibernating ground squirrel, Spermophilus tridecemlineatus.

    abstract::The peroxisome proliferator-activated receptor (PPAR) family of transcription factors play a key role in lipid metabolism and have been implicated in a number of disease states, most notably of which is obesity. Controlled regulation of lipid metabolism is a key ingredient for successful hibernation. Partial cDNA sequ...

    journal_title:Molecular and cellular biochemistry

    pub_type: 杂志文章

    doi:10.1007/s11010-005-3459-4

    authors: Eddy SF,Morin P Jr,Storey KB

    更新日期:2005-01-01 00:00:00