Genomic organization and expression pattern of scapinin (PHACTR3) in mouse and human.

Abstract:

:Scapinin has been found to bind to cytoplasmic actin and is also a putative regulatory subunit of protein phosphatase-1 (PP1). It is found attached to the nuclear matrix-intermediate filament (NM-IF) and is down-regulated by differentiation of tumor cells. We have analyzed the genomic structure and tissue-specific expression pattern of both the human scapinin gene (PHACTR3) and the orthologous mouse gene. Both genes showed a highly conserved complex genomic organization with four different leader exons. Alternative splicing of exon 5 was found to be limited to human and variable polyadenylation in mouse transcripts only. In both species expression seems to occur predominantly in the brain. By Northern blot analysis two major transcripts in human and three transcripts in mouse were detected. Expression analysis in the mouse revealed a tissue-specific complex transcription pattern in the brain and a specific pattern was observed during prenatal development. Based on the transcriptional data we therefore assume scapinin to have a distinct biological function in the mammalian brain.

journal_name

Cytogenet Genome Res

authors

Worch S,Fiedler E,Hansmann I,Schlote D

doi

10.1159/000094797

subject

Has Abstract

pub_date

2006-01-01 00:00:00

pages

23-9

issue

1

eissn

1424-8581

issn

1424-859X

pii

94797

journal_volume

115

pub_type

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