Antigenic characterization of the fish pathogen Flavobacterium psychrophilum.

abstract：:A gene, pfa1, encoding an autotransporter was cloned from a pathogenic Pseudomonas fluorescens strain, TSS, isolated from diseased fish. The expression of pfa1 is enhanced during infection and is regulated by growth phase and growth conditions. Mutation of pfa1 significantly attenuates the overall bacterial virulence ...

journal_title：Applied and environmental microbiology

authors： Hu YH,Liu CS,Hou JH,Sun L

更新日期：2009-07-01 00:00:00

abstract：:Methods to assess the impact of goose fecal contamination are needed as the result of the increasing number of Canada geese (Branta canadensis) near North American inland waters. However, there is little information on goose fecal microbial communities, and such data are important for the development of host-specific ...

journal_title：Applied and environmental microbiology

authors： Lu J,Santo Domingo JW,Hill S,Edge TA

更新日期：2009-09-01 00:00:00

abstract：:Seawater used in mariculture has been suspected of being a potential source of infection. In this study, the lethal effects of low-amperage electric treatment on microorganisms were examined in natural seawater and in seawater inoculated with Vibrio parahaemolyticus. In both cases, bacteria including V. parahaemolytic...

journal_title：Applied and environmental microbiology

authors： Park JC,Lee MS,Lee DH,Park BJ,Han DW,Uzawa M,Takatori K

更新日期：2003-04-01 00:00:00

abstract：:Pseudomonas fluorescens 2-79 suppresses take-all, a major root disease of wheat caused by Gaeumannomyces graminis var. tritici. The bacteria produce an antibiotic, phenazine-1-carboxylic acid (PCA), and a fluorescent pyoverdin siderophore. Previous studies have established that PCA has an important role in the biologi...

journal_title：Applied and environmental microbiology

authors： Hamdan H,Weller DM,Thomashow LS

更新日期：1991-11-01 00:00:00

abstract：:Laboratory-grown strains of chemoautotrophic Thiomicrospira sp. strain L-12 and Thiobacillus neapolitanus produced cell carbon that was 24.6 to 25.1 ppt (24.6 to 25.1 mg/g) lower in C isotope abundance than the ambient source of carbon dioxide and bicarbonate. This degree of C isotope depletion was comparable to that ...

journal_title：Applied and environmental microbiology

authors： Ruby EG,Jannasch HW,Deuser WG

更新日期：1987-08-01 00:00:00

abstract：:The use of a PCR method to investigate the fate of liberated Q(beta) coliphage RNA in wastewater suggests that a positive PCR result indicates the recent presence of potentially viable virus in the sample and therefore increases the public health significance of the result. ...

journal_title：Applied and environmental microbiology

authors： Limsawat S,Ohgaki S

更新日期：1997-07-01 00:00:00

abstract：:Human sapovirus sequences were identified in 12 (100%) influent and 7 (58%) effluent wastewater samples collected once a month for a year. The strains were characterized based on their partial capsid gene sequences and classified into 10 genotypes, demonstrating that genetically diverse sapovirus strains infect humans...

journal_title：Applied and environmental microbiology

authors： Kitajima M,Haramoto E,Phanuwan C,Katayama H

更新日期：2011-06-01 00:00:00

abstract：:A newly isolated rod-shaped, gram-negative anaerobic bacterium from human feces, named Julong 732, was found to be capable of metabolizing the isoflavone dihydrodaidzein to S-equol under anaerobic conditions. The metabolite, equol, was identified by using electron impact ionization mass spectrometry, (1)H and (13)C nu...

journal_title：Applied and environmental microbiology

authors： Wang XL,Hur HG,Lee JH,Kim KT,Kim SI

更新日期：2005-01-01 00:00:00

abstract：:We determined the prevalences of Escherichia coli O157:H7 in feces, hide, and carcasses of meat goats at a U.S. processing plant. Prevalences were 11.1%, 2.7%, and 2.7%, respectively. Sixteen pulsed-field gel electrophoresis (PFGE) subtypes were identified among 49 E. coli O157:H7 isolates, some of which were present ...

journal_title：Applied and environmental microbiology

authors： Jacob ME,Foster DM,Rogers AT,Balcomb CC,Sanderson MW

更新日期：2013-07-01 00:00:00

abstract：:The N-unregulated white rot fungus Bjerkandera sp. strain BOS55 was cultured in 1 liter of peptone-yeast extract medium to produce lignin peroxidase (LiP). During the LiP assay, the oxidation of veratryl alcohol to veratraldehyde was inhibited due to tyrosine present in the peptone and the yeast extract. ...

journal_title：Applied and environmental microbiology

authors： ten Have R,Hartmans S,Field JA

更新日期：1997-08-01 00:00:00

abstract：:The diversity of fungi in permanently frozen soil from northeastern Siberia was studied by culture-independent PCR amplification of diverse environmental 18S rRNA genes. Elaborate protocols to avoid contamination during drilling, sampling, and amplification were used. A broad diversity of eukaryotic DNA sequences that...

journal_title：Applied and environmental microbiology

authors： Lydolph MC,Jacobsen J,Arctander P,Gilbert MT,Gilichinsky DA,Hansen AJ,Willerslev E,Lange L

更新日期：2005-02-01 00:00:00

abstract：:The cry1-type genes of Bacillus thuringiensis represent the largest cry gene family, which contains 50 distinct holotypes. It is becoming more and more difficult to identify cry1-type genes using current methods because of the increasing number of cry1-type genes. In the present study, an improved PCR-restriction frag...

journal_title：Applied and environmental microbiology

authors： Shu C,Liu D,Zhou Z,Cai J,Peng Q,Gao J,Song F,Zhang J

更新日期：2013-11-01 00:00:00

abstract：:Hot-water extracts of mesquite (Prosopis glandulosa) wood were assayed for their total carbohydrate, reducing sugar, and glucose content. These hydrolysates were then used as complete media for yeast growth. A total of 10 strains of yeasts were evaluated for their biomass production in the mesquite wood hydrolysates. ...

journal_title：Applied and environmental microbiology

authors： Stanlake GJ

更新日期：1986-08-01 00:00:00

abstract：:The competition between selected or commercial killer strains of type K2 and sensitive commercial strains of Saccharomyces cerevisiae was studied under various conditions in sterile grape juice fermentations. The focus of this study was the effect of yeast inoculation levels and the role of assimilable nitrogen nutrit...

journal_title：Applied and environmental microbiology

authors： Medina K,Carrau FM,Gioia O,Bracesco N

更新日期：1997-07-01 00:00:00

abstract：:Biogenic amines may reach concentrations of public health concern in some cheeses. To minimize biogenic amine buildup in raw milk cheese, high-pressure treatments of 400 or 600 MPa for 5 min were applied on days 21 and 35 of ripening. On day 60, counts of lactic acid bacteria, enterococci, and lactobacilli were 1 to 2...

journal_title：Applied and environmental microbiology

authors： Calzada J,del Olmo A,Picón A,Gaya P,Nuñez M

更新日期：2013-02-01 00:00:00

abstract：:Bacterial signaling is an important part of community life, but little is known about the signal transduction pathways of the as-yet-uncultured members of microbial communities. To address this gap, we aimed to identify genes directing the synthesis of signals in uncultured bacteria associated with the midguts of gyps...

journal_title：Applied and environmental microbiology

authors： Guan C,Ju J,Borlee BR,Williamson LL,Shen B,Raffa KF,Handelsman J

更新日期：2007-06-01 00:00:00

abstract：:Epimerization of sugar nucleotides is central to the structural diversification of monosaccharide building blocks for cellular biosynthesis. Epimerase applicability to carbohydrate synthesis can be limited, however, by the high degree of substrate specificity exhibited by most sugar nucleotide epimerases. Here, we dis...

journal_title：Applied and environmental microbiology

authors： Rapp C,van Overtveldt S,Beerens K,Weber H,Desmet T,Nidetzky B

更新日期：2020-12-04 00:00:00

abstract：:Phages play a key role in the marine environment by regulating the transfer of energy between trophic levels and influencing global carbon and nutrient cycles. The diversity of marine phage communities remains difficult to characterize because of the lack of a signature gene common to all phages. Recent studies have d...

journal_title：Applied and environmental microbiology

authors： Goldsmith DB,Crosti G,Dwivedi B,McDaniel LD,Varsani A,Suttle CA,Weinbauer MG,Sandaa RA,Breitbart M

更新日期：2011-11-01 00:00:00

abstract：:Cyclic lipopeptides (CLPs) are produced by many Pseudomonas species and have several biological functions, including a role in surface motility, biofilm formation, virulence, and antimicrobial activity. This study focused on the diversity and role of LuxR-type transcriptional regulators in CLP biosynthesis in Pseudomo...

journal_title：Applied and environmental microbiology

authors： de Bruijn I,Raaijmakers JM

更新日期：2009-07-01 00:00:00

abstract：:The Alvord Basin in southeast Oregon contains a variety of hydrothermal features which have never been microbiologically characterized. A sampling of Murky Pot (61 degrees C; pH 7.1) led to the isolation of a novel arsenic-metabolizing organism (YeAs) which produces an arsenic sulfide mineral known as beta-realgar, a ...

journal_title：Applied and environmental microbiology

authors： Ledbetter RN,Connon SA,Neal AL,Dohnalkova A,Magnuson TS

更新日期：2007-09-01 00:00:00

abstract：:Arhodomonas sp. strain Seminole was isolated from a crude oil-impacted brine soil and shown to degrade benzene, toluene, phenol, 4-hydroxybenzoic acid (4-HBA), protocatechuic acid (PCA), and phenylacetic acid (PAA) as the sole sources of carbon at high salinity. Seminole is a member of the genus Arhodomonas in the cla...

journal_title：Applied and environmental microbiology

authors： Dalvi S,Nicholson C,Najar F,Roe BA,Canaan P,Hartson SD,Fathepure BZ

更新日期：2014-11-01 00:00:00

abstract：:Methanogenic bacteria, which are presently identified on the basis of cell morphology and substrate conversion to CH(4), can be differentiated from nonmethanogens and identified in pure or mixed culture on the basis of their autofluorescence under ultraviolet illumination. ...

journal_title：Applied and environmental microbiology

authors： Mink RW,Dugan PR

更新日期：1977-03-01 00:00:00

abstract：:A rapid and simple approach to the small-subunit (SSU) rRNA-based quantitative detection of a specific group of microorganisms in complex ecosystems has been developed. The method employs sequence-specific cleavage of rRNA molecules with oligonucleotides and RNase H. Defined mixtures of SSU rRNAs were mixed with an ol...

journal_title：Applied and environmental microbiology

authors： Uyeno Y,Sekiguchi Y,Sunaga A,Yoshida H,Kamagata Y

更新日期：2004-06-01 00:00:00

abstract：:Restriction fragment length polymorphism (RFLP) and vegetative compatibility analyses were undertaken to assess genetic relationships among 52 isolates of Fusarium oxysporum f. sp. vasinfectum of worldwide origin and representing race A, 3, or 4 on cotton plants. Ten distinct vegetative compatibility groups (VCGs) wer...

journal_title：Applied and environmental microbiology

authors： Fernandez D,Assigbese K,Dubois MP,Geiger JP

更新日期：1994-11-01 00:00:00

abstract：:The association between grass roots and Azospirillum brasilense Sp 7 was investigated by the Fahraeus slide technique, using nitrogen-free medium. Young inoculated roots of pearl millet and guinea grass produced more mucilaginous sheath (mucigel), root hairs, and lateral roots than did uninoculated sterile controls. T...

journal_title：Applied and environmental microbiology

authors： Umali-Garcia M,Hubbell DH,Gaskins MH,Dazzo FB

更新日期：1980-01-01 00:00:00

abstract：:Biofilm bacteria challenged with monochloramine retained significant respiratory activity, even though they could not be cultured on agar plates. Microbial colony counts on agar media declined by approximately 99.9% after 1 h of disinfection, whereas the number of bacteria stained by a fluorescent redox dye experience...

journal_title：Applied and environmental microbiology

authors： Stewart PS,Griebe T,Srinivasan R,Chen CI,Yu FP,deBeer D,McFeters GA

更新日期：1994-05-01 00:00:00

abstract：:A total of 286 isolates of Pseudomonas maltophilia was collected from sheep exhibiting brown or yellowish fleece rot and from fly-strike lesions. Enzyme activities for 10 of the isolates were examined by plate tests and with the API ZYM system and compared with the enzymatic profile of a human type strain of P. maltop...

journal_title：Applied and environmental microbiology

authors： Macdiarmid JA,Burrell DH

更新日期：1986-02-01 00:00:00

abstract：:The accurate description of a microbial community is an important first step in understanding the roles of its components in ecosystem function. A method for surveying microbial communities termed serial analysis of rRNA genes (SARD) is described here. Through a series of molecular cloning steps, short DNA sequence ta...

journal_title：Applied and environmental microbiology

authors： Ashby MN,Rine J,Mongodin EF,Nelson KE,Dimster-Denk D

更新日期：2007-07-01 00:00:00

abstract：:Prior growth of seven enterohemorrhagic and one nonenterohemorrhagic strains of Escherichia coli in tryptic soy broth with (TSB+G) and without (TSB-G) 1% glucose was evaluated for its effect on acid tolerance. The final pHs of 18-h TSB+G and TSB-G cultures were 4.6 to 5.2 and 6.9 to 7.0, respectively. Cells were then ...

journal_title：Applied and environmental microbiology

authors： Buchanan RL,Edelson SG

更新日期：1996-11-01 00:00:00

abstract：:Iron (Fe) is one of the most important micronutrients for most life forms on earth. While abundant in soil, Fe bioavailability in oxic soil is very low. Under environmental conditions, bacteria need to acquire sufficient Fe to sustain growth while limiting the energy cost of siderophore synthesis. Biofilm formation mi...

journal_title：Applied and environmental microbiology

authors： Rizzi A,Leroux J,Charron-Lamoureux V,Roy S,Beauregard PB,Bellenger JP

更新日期：2020-10-28 00:00:00