Insertion site preferences of the P transposable element in Drosophila melanogaster.

Abstract:

:We determined the genomic sequence at the site of insertion in 2,266 unselected P element insertion events. Estimating physical properties of the genomic DNA at these insertion sites-such as base composition, bendability, A-philicity, protein-induced deformability, and B-DNA twist-revealed that they differ significantly from average chromosomal DNA. By examining potential hydrogen bonding sites in the major groove, we identified a 14-bp palindromic pattern centered on the 8-bp target site duplication that is generated by P element insertion. Our results suggest that the P-element transposition mechanism has a two-fold dyad symmetry and recognizes a structural feature at insertion sites, rather than a specific sequence motif.

authors

Liao GC,Rehm EJ,Rubin GM

doi

10.1073/pnas.050017397

keywords:

subject

Has Abstract

pub_date

2000-03-28 00:00:00

pages

3347-51

issue

7

eissn

0027-8424

issn

1091-6490

pii

050017397

journal_volume

97

pub_type

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