Sensitivity of flavin fluorescence dynamics in neuronal nitric oxide synthase to cofactor-induced conformational changes and dimerization.

Abstract:

:The fluorescence intensity of the two flavin prosthetic groups, FMN and FAD, in neuronal nitric oxide synthase (nNOS) was found to decay highly nonexponentially, being best described by four fluorescence lifetimes. This excited state heterogeneity is the result of multiple flavin quenching sites which are due to several flavin microenvironments created mainly by stacking with aromatic amino acids. Investigating nNOS in the absence of one or more of Ca2+/calmodulin, tetrahydrobiopterin, and heme revealed an influence of these cofactors on the microenvironments of the flavin prosthetic groups. Similar effects on the flavin rotational dynamics were found by analyzing the fluorescence anisotropy decay of the holo and of the different apo forms of nNOS. Since the tetrahydrobiopterin and the heme are located in the N-terminal oxygenase domain of nNOS, their effect on the flavins in the C-terminal reductase domain is explained by a folding back of the reductase domain onto the oxygenase domain. Thereby a domain-domain interface is created containing the FAD, FMN, heme, and tetrahydrobiopterin prosthetic groups which allows for efficient electron transfer during catalysis. The heme group, which is known to be essential for homodimerization of nNOS, was also found to be essential for the formation of the domain-domain interface.

journal_name

Biochemistry

journal_title

Biochemistry

authors

Brunner K,Tortschanoff A,Hemmens B,Andrew PJ,Mayer B,Kungl AJ

doi

10.1021/bi981138l

subject

Has Abstract

pub_date

1998-12-15 00:00:00

pages

17545-53

issue

50

eissn

0006-2960

issn

1520-4995

pii

bi981138l

journal_volume

37

pub_type

杂志文章
  • Conformational states of the bacteriophage P22 capsid subunit in relation to self-assembly.

    abstract::The formation of closed icosahedral capsids from a single species of coat protein subunit requires that the subunits assume different conformations at different lattice positions. In the double-stranded DNA bacteriophage P22, formation of correctly dimensioned capsids is mediated by interaction between coat protein su...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi00475a030

    authors: Prevelige PE Jr,Thomas D,King J,Towse SA,Thomas GJ Jr

    更新日期:1990-06-12 00:00:00

  • Fluorescence investigation of the sex steroid binding protein of rabbit serum: steroid binding and subunit dissociation.

    abstract::The relationship between steroid binding and protein subunit interactions of rabbit sex steroid binding protein (rSBP) has been studied by steady-state and time-resolved fluorescence spectroscopy. The high-affinity (Ka approximately 10(8) M-1 at 4 degrees C), fluorescent estrogen d-1,3,5(10),6,8-estrapentaene-3,17 bet...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi00492a005

    authors: Casali E,Petra PH,Ross JB

    更新日期:1990-10-09 00:00:00

  • Hydrogen bonding at the active site of delta 5-3-ketosteroid isomerase.

    abstract::The solution secondary structure of the highly active Y55F/Y88F "Tyr-14-only" mutant of delta 5-3-ketosteroid isomerase complexed with 19-nortestosterone hemisuccinate has been shown to consist of three helices, a six-stranded mixed beta-sheet, and five turns. The steroid binds near the general acid, Tyr-14, on helix ...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi971549m

    authors: Zhao Q,Abeygunawardana C,Gittis AG,Mildvan AS

    更新日期:1997-12-02 00:00:00

  • Metal binding to Saccharomyces cerevisiae ferrochelatase.

    abstract::Ferrochelatase is the terminal enzyme in the heme biosynthetic pathway. It catalyzes the insertion of ferrous iron into protoporphyrin IX to produce protoheme IX. The crystal structures of ferrochelatase from Saccharomyces cerevisiae in free form, in complex with Co(II), a substrate metal ion, and in complex with two ...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi0260785

    authors: Karlberg T,Lecerof D,Gora M,Silvegren G,Labbe-Bois R,Hansson M,Al-Karadaghi S

    更新日期:2002-11-19 00:00:00

  • Tyrosyl interactions in the folding and unfolding of bovine pancreatic ribonuclease A: a study of tyrosine-to-phenylalanine mutants.

    abstract::Three tyrosine-to-phenylalanine mutants of ribonuclease A (Y25F, Y92F, and Y97F) are investigated for their enzymatic activities, molecular stabilities, and unfolding/refolding kinetics. These mutants exhibit 80, 90, and 80%, respectively, of the catalytic activity of the wild-type enzyme. Thermal, Gdn.HCl, and pH tra...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi970711i

    authors: Juminaga D,Wedemeyer WJ,Garduño-Júarez R,McDonald MA,Scheraga HA

    更新日期:1997-08-19 00:00:00

  • Tetrameric Assembly of Monoubiquitin Accurately Mimics the Lys11 Polyubiquitin Chain Structure.

    abstract::Specific lysine residues on the ubiquitin surface were selected during the course of evolution to form different polyubiquitin chain structures that signal diverse cellular processes. A vast number of ubiquitin receptors specifically recognize and decode the signals conferred by these polyubiquitin chains. The mechani...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/acs.biochem.5b00498

    authors: Levin-Kravets O,Shohat N,Prag G

    更新日期:2015-08-04 00:00:00

  • Estimating the degree of expansion in the transition state for protein unfolding: analysis of the pH dependence of the rate constant for caricain denaturation.

    abstract::The thermal denaturation of caricain (the most alkaline of papain-related proteinases) was studied in acid media. Under all conditions tested, caricain denatured irreversibly following a single first-order reaction that involves simultaneous loss of secondary and tertiary structures. Besides, variation of the rate con...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi991658w

    authors: López-Arenas L,Solís-Mendiola S,Hernández-Arana A

    更新日期:1999-11-30 00:00:00

  • Cooperative stabilization of transthyretin by clusterin and diflunisal.

    abstract::The circulating protein transthyretin (TTR) can unfold, oligomerize, and form highly structured amyloid fibrils that are deposited in tissues, causing organ damage and disease. This pathogenic process is caused by a heritable TTR point mutation in cases of familial TTR-related amyloidosis or wild-type TTR in cases of ...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi5011249

    authors: Greene MJ,Klimtchuk ES,Seldin DC,Berk JL,Connors LH

    更新日期:2015-01-20 00:00:00

  • Chloroplast biogenesis: [4-vinyl] chlorophyllide a reductase is a divinyl chlorophyllide a-specific, NADPH-dependent enzyme.

    abstract::Some properties of [4-vinyl] chlorophyllide a reductase are described. This enzyme converts divinyl chlorophyllide a to monovinyl chlorophyllide a. The latter is the immediate precursor of monovinyl chlorophyll a, the main chlorophyll in green plants. [4-Vinyl] chlorophyllide a reductase plays an important role in day...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi00151a011

    authors: Parham R,Rebeiz CA

    更新日期:1992-09-15 00:00:00

  • Fine mapping of DNA single-stranded regions using base-specific chemical probes: study of an open complex formed between RNA polymerase and the lac UV5 promoter.

    abstract::We have used diethyl pyrocarbonate (DEP), which carbethoxylates adenine bases, and dimethyl sulfate (DMS), which methylates guanine residues and single-stranded cytosines, to probe bases in open complexes between RNA polymerase and the lac UV5 promoter in vitro. We compared the kinetics of reactivity between bases in ...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi00436a040

    authors: Buckle M,Buc H

    更新日期:1989-05-16 00:00:00

  • Metal-ligand vibrations of cyanoferric myeloperoxidase and cyanoferric horseradish peroxidase: evidence for a constrained heme pocket in myeloperoxidase.

    abstract::The low-frequency FeCN vibrations of cyanoferric myeloperoxidase (MPO) and horseradish peroxidase (HRP) have been measured by resonance Raman spectroscopy. The ordering of the frequencies of the predominantly FeC stretching and FeCN bending normal vibrational modes in the two peroxidases differs. These normal mode vib...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi00492a012

    authors: López-Garriga JJ,Oertling WA,Kean RT,Hoogland H,Wever R,Babcock GT

    更新日期:1990-10-09 00:00:00

  • Variable-temperature spectroelectrochemical study of horseradish peroxidase.

    abstract::The reduction potentials of the compound II/ferric and compound I/compound II couples have been studied, using potassium hexachloroiridate as a mediator titrant, by thin-layer spectroelectrochemistry. Compound I, which is 2 equiv more oxidized than the ferric (i.e., resting) form of the enzyme, was reversibly formed v...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi00009a017

    authors: Farhangrazi ZS,Fossett ME,Powers LS,Ellis WR Jr

    更新日期:1995-03-07 00:00:00

  • Characterization of the ligand binding activities of vitronectin: interaction of vitronectin with lipids and identification of the binding domains for various ligands using recombinant domains.

    abstract::Vitronectin is a multifunctional plasma glycoprotein which may regulate the systems related to protease cascades such as the coagulation, fibrinolysis, and complement systems as well as cell adhesion. Solid-phase assays and affinity chromatography on immobilized glycolipids indicated that vitronectin purified under de...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi972247n

    authors: Yoneda A,Ogawa H,Kojima K,Matsumoto I

    更新日期:1998-05-05 00:00:00

  • Translocase-bound SecA is largely shielded from the phospholipid acyl chains.

    abstract::Protein translocation in Escherichia coli is mediated by the SecA ATPase bound to the SecYEG membrane protein complex. SecA translocation ATPase activity as well as protein translocation is dependent on the presence of negatively charged lipids. By using a phospholipid with an acyl chain linked photoactivatable group,...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi9809021

    authors: van Voorst F,van der Does C,Brunner J,Driessen AJ,de Kruijff B

    更新日期:1998-09-01 00:00:00

  • Structure of Toxoplasma gondii LDH1: active-site differences from human lactate dehydrogenases and the structural basis for efficient APAD+ use.

    abstract::While within a human host the opportunistic pathogen Toxoplasma gondii relies heavily on glycolysis for its energy needs. Lactate dehydrogenase (LDH), the terminal enzyme in anaerobic glycolysis necessary for NAD(+) regeneration, therefore represents an attractive therapeutic target. The tachyzoite stage lactate dehyd...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi035108g

    authors: Kavanagh KL,Elling RA,Wilson DK

    更新日期:2004-02-03 00:00:00

  • Human erythrocytic purine nucleoside phosphorylase: reaction with sugar-modified nucleoside substrates.

    abstract::The kinetic parameters (Km and Vmax) of sugar-modified analogues of inosine and guanosine have been determined with human erythrocytic purine nucleoside phosphorylase (PNP). Steric alterations at the 2' and 3' positions greatly lessened or abolished substrate activity. However, the 5'-deoxy- and 2',5'-dideoxy-beta-D-r...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi00542a016

    authors: Stoeckler JD,Cambor C,Parks RE Jr

    更新日期:1980-01-08 00:00:00

  • Mapping the G-actin binding surface of cofilin using synchrotron protein footprinting.

    abstract::Cofilin is an actin regulatory protein that binds to both monomeric and filamentous actin, and has filament severing activity. Although crystal structures for the monomeric forms of both G-actin and cofilin have been described, the structure of the binary cofilin-G-actin complex is not available. Synchrotron protein f...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi0121104

    authors: Guan JQ,Vorobiev S,Almo SC,Chance MR

    更新日期:2002-05-07 00:00:00

  • β-Lactone Synthetase Found in the Olefin Biosynthesis Pathway.

    abstract::The first β-lactone synthetase enzyme is reported, creating an unexpected link between the biosynthesis of olefinic hydrocarbons and highly functionalized natural products. The enzyme OleC, involved in the microbial biosynthesis of long-chain olefinic hydrocarbons, reacts with syn- and anti-β-hydroxy acid substrates t...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/acs.biochem.6b01199

    authors: Christenson JK,Richman JE,Jensen MR,Neufeld JY,Wilmot CM,Wackett LP

    更新日期:2017-01-17 00:00:00

  • Structure of isocitrate dehydrogenase with isocitrate, nicotinamide adenine dinucleotide phosphate, and calcium at 2.5-A resolution: a pseudo-Michaelis ternary complex.

    abstract::The structure of isocitrate dehydrogenase (IDH) with a bound complex of isocitrate, NADP+, and Ca2+ was solved at 2.5-A resolution and compared by difference mapping against previously determined enzymatic complexes. Calcium replaces magnesium in the binding of metal-substrate chelate complex, resulting in a substanti...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi00087a008

    authors: Stoddard BL,Dean A,Koshland DE Jr

    更新日期:1993-09-14 00:00:00

  • Role of the N-terminal helix I for dimerization and stability of the calcium-binding protein S100B.

    abstract::Human S100B(beta beta) is a small intracellular EF-hand calcium-binding protein that consists of two noncovalently associated 91-residue beta monomers. The three-dimensional structures of S100B reveal the dimer interface consists of four alpha-helices (I, I' and IV, IV') packed in an X-type bundle. In this study, guan...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi0118052

    authors: Ferguson PL,Shaw GS

    更新日期:2002-03-19 00:00:00

  • A zinc ribbon protein in DNA replication: primer synthesis and macromolecular interactions by the bacteriophage T4 primase.

    abstract::The gene product 61 primase protein from bacteriophage T4 was expressed as an intein fusion and purified to homogeneity. The primase binds one zinc ion, which is coordinated by four cysteine residues to form a zinc ribbon motif. Factors that influence the rate of priming were investigated, and a physiologically releva...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi0108554

    authors: Valentine AM,Ishmael FT,Shier VK,Benkovic SJ

    更新日期:2001-12-18 00:00:00

  • Affinity cleavage at the metal-binding site of phosphoenolpyruvate carboxykinase.

    abstract::Chicken liver phosphoenolpyruvate carboxykinase (PEPCK) was rapidly inactivated by micromolar concentrations of ferrous sulfate in the presence of ascorbate at pH 7.4. Omitting ascorbate or replacing the Fe2+ with Mn2+ or Mg2+ gives no inactivation. Mn2+, Mg2+, or Co2+ at 100-fold molar excess over Fe2+ offered comple...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi970574p

    authors: Hlavaty JJ,Nowak T

    更新日期:1997-12-09 00:00:00

  • The Interaction between the Third Type III Domain from Fibronectin and Anastellin Involves β-Strand Exchange.

    abstract::Anastellin is a small recombinant fragment derived from the extracellular matrix protein fibronectin; it comprises the first type III (FN3) domain without the two N-terminal β-strands. It inhibits angiogenesis, tumor growth, and metastasis in mouse models and requires endogenous fibronectin for its in vivo anti-angiog...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/acs.biochem.7b00633

    authors: Stine JM,Ahl GJH,Schlenker C,Rusnac DV,Briknarová K

    更新日期:2017-09-05 00:00:00

  • Reversible unfolding of cytochrome c upon interaction with cardiolipin bilayers. 1. Evidence from deuterium NMR measurements.

    abstract::Deuterium NMR has been used to investigate the structure and dynamic state of cytochrome c complexed with bilayers of cardiolipin. Reductive methylation was employed to prepare [N epsilon, N epsilon-C2H3]lysyl cytochrome c, and deuterium exchange provided labeling of backbone sites to give [amide-2H]cytochrome c or mo...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi00230a010

    authors: Spooner PJ,Watts A

    更新日期:1991-04-23 00:00:00

  • Fluorescent and photoactivatable fluorescent derivatives of tetrodotoxin to probe the sodium channel of excitable membranes.

    abstract::Fluorescent and photoactivatable fluorescent derivatives of tetrodotoxin (TTX) have been synthesized. N-Methylanthraniloylglycine hydrazide, anthraniloyl hydrazide, and 2-azidoanthraniloylglycine hydrazide were coupled to the carbonyl at C6 of oxidized tetrodotoxin to form stable fluorescent hydrazones. The C6 ketone ...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi00517a025

    authors: Angelides KJ

    更新日期:1981-07-07 00:00:00

  • Cloning of synthetic deoxyribonucleic acid that codes for embryonic cardiac myosin light-chain polypeptide.

    abstract::Double-stranded complementary deoxyribonucleic acid (cDNA) transcribed in vitro from a partially pure myosin light-chain messenger ribonucleic acid (mRNA) of the chick embryonic heart was cloned in Escherichia coli strain chi 1776 by using the HindIII cleavage site in the plasmid pBR322. The insertion of essentially f...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi00592a019

    authors: Arnold HH,Siddiqui MA

    更新日期:1979-12-11 00:00:00

  • Chimeric human calcitonin and glucagon receptors reveal two dissociable calcitonin interaction sites.

    abstract::Two chimeric receptors were constructed by transposing the coding regions for the putative N-terminal domains of the human calcitonin (hCTR) and glucagon (hGGR) receptors. These receptors were stably expressed as glycosylated proteins with molecular masses of 80 kDa for the calcitonin receptor N-terminus chimera (NtCT...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi00003a040

    authors: Stroop SD,Kuestner RE,Serwold TF,Chen L,Moore EE

    更新日期:1995-01-24 00:00:00

  • Kinetics of halide release of haloalkane dehalogenase: evidence for a slow conformational change.

    abstract::Haloalkane dehalogenase converts haloalkanes to their corresponding alcohols and halides. The reaction mechanism involves the formation of a covalent alkyl-enzyme complex which is hydrolyzed by water. The active site is a hydrophobic cavity buried between the main domain and the cap domain of the enzyme. The enzyme ha...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi952904g

    authors: Schanstra JP,Janssen DB

    更新日期:1996-05-07 00:00:00

  • Resonance Raman spectroscopy of ribonucleotide reductase. Evidence for a deprotonated tyrosyl radical and photochemistry of the binuclear iron center.

    abstract::Native ribonucleotide reductase from Escherichia coli exhibits a resonance-enhanced Raman mode at 1498 cm-1 that is characteristic of a tyrosyl radical. The Raman frequency as well as the absorption maximum at 410 nm identifies the radical as being in a deprotonated state. The B2 subunit of ribonucleotide reductase sh...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi00430a074

    authors: Backes G,Sahlin M,Sjöberg BM,Loehr TM,Sanders-Loehr J

    更新日期:1989-02-21 00:00:00

  • Iron binding to horse spleen apoferritin: a vanadyl ENDOR spin probe study.

    abstract::The role of the protein shell in the formation of the hydrous ferric oxide core of ferritin is poorly understood. A VO2+ spin probe study was undertaken to characterize the initial complex of Fe2+ with horse spleen apoferritin (96% L-subunits). A competitive binding study of VO2+ and Fe2+ showed that the two metals co...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi00102a012

    authors: Hanna PM,Chasteen ND,Rottman GA,Aisen P

    更新日期:1991-09-24 00:00:00