The binding of ATP and Mg2+ to the calcium adenosinetriphosphatase of sarcoplasmic reticulum follows a random mechanism.

Abstract:

:The enzyme form of the calcium adenosinetriphosphatase of sarcoplasmic reticulum (CaATPase) that is stable in the presence of calcium, cE.Ca2, has a binding site for the catalytic Mg2+ ion with a dissociation constant of 0.94 +/- 0.15 mM at 25 degrees C, pH 7.0, and 100 mM KCl. This is approximately 10 times smaller than that reported for the free enzyme, E, (8.8 mM) under similar conditions [Punzengruber, C., Prager, R., Kolassa, N., Winkler, F., & Suko, J. (1978) Eur. J. Biochem. 92, 349-359]. This difference shows that the sites for the catalytic and the transported ions interact in the absence of ATP. The addition of ATP and EDTA to enzyme that had been incubated with Ca2+ and Mg2+ resulted in the formation of 61% phosphoenzyme. The addition of unlabeled ATP and Mg2+ to enzyme that had been incubated with 3.5 microM free Ca2+ and labeled ATP gave 39% labeled phosphoenzyme. This shows that the binding of ATP and Mg2+ to cE.Ca2 follows a random mechanism. The rate constants for dissociation of ATP and Mg2+ from cE.Ca2.ATP.Mg are different: kdiss(ATP) = 120 s-1 and kdiss(Mg2+) = 60 s-1. This shows that Mg2+ and ATP can bind and dissociate independently; they do not have to associate or dissociate from cE as a Mg.ATP complex. Calcium-free enzyme binds metal-free ATP at the active site with a dissociation constant of 44 +/- 4 microM, kdiss = 130 +/- 7 s-1, and a calculated association rate constant of 3 x 10(6) M-1 s-1. Calcium-free enzyme that was incubated with [gamma-32P]ATP gave 38% labeled phosphoenzyme when chased with unlabeled ATP, Mg2+, and Ca2+. An increase of the Mg2+ concentration did not increase the amount of E32P formed. This shows that the binding of Mg2+ and ATP to free E also follows a random mechanism. The Mg2+ ion is not buried under ATP, and ATP is not under a Mg2+ ion. Incubation of free E with Mg2+ and ATP causes a conformational change that activates the enzyme for phosphorylation and decreases the rate constant for the dissociation of ATP from kdiss = 120 s-1 to kdiss = 47 s-1.

journal_name

Biochemistry

journal_title

Biochemistry

authors

Reinstein J,Jencks WP

doi

10.1021/bi00077a016

subject

Has Abstract

pub_date

1993-07-06 00:00:00

pages

6632-42

issue

26

eissn

0006-2960

issn

1520-4995

journal_volume

32

pub_type

杂志文章
  • Molecular cloning of bovine cardiac muscle heat-shock protein 70 kDa and its phosphorylation by cAMP-dependent protein kinase in vitro.

    abstract::The 70-kDa heat-shock protein (Hsp70) has been cloned and sequenced from bovine cardiac muscle. On the basis of sequence features, the gene corresponds to the cytoplasmic form of Hsp70. This cardiac Hsp70 cDNA clone has an open reading frame of 1926 bp coding for 641 amino acids and a predicted molecular mass of 70.25...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi049036k

    authors: Lakshmikuttyamma A,Selvakumar P,Anderson DH,Datla RS,Sharma RK

    更新日期:2004-10-26 00:00:00

  • Molecular model of equine infectious anemia virus proteinase and kinetic measurements for peptide substrates with single amino acid substitutions.

    abstract::A molecular model has been built of the equine infectious anemia virus (EIAV) proteinase on the basis of the crystal structures of the related Rous sarcoma virus (RSV) and human immunodeficiency virus (HIV) proteinases. The 104 residue long EIAV proteinase has 30 identical and 11 similar amino acids compared to those ...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi00064a019

    authors: Weber IT,Tözsér J,Wu J,Friedman D,Oroszlan S

    更新日期:1993-04-06 00:00:00

  • Phosphoprotein particles: calcium and inorganic phosphate binding structures.

    abstract::Phosphoprotein particles were isolated in their native state from the physiological fluid of the estuarine clam Rangia cuneata , and the characteristics of the mineral ion-protein complex which constitutes the native particle were investigated by using mineral ion binding and mineral ion exchange techniques. The parti...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi00302a017

    authors: Marsh ME,Sass RL

    更新日期:1984-03-27 00:00:00

  • Membrane trafficking of aquaporin 1 is mediated by protein kinase C via microtubules and regulated by tonicity.

    abstract::It is well-known that the rapid flow of water into and out of cells is controlled by membrane proteins called aquaporins (AQPs). However, the mechanisms that allow cells to quickly respond to a changing osmotic environment are less well established. Using GFP-AQP fusion proteins expressed in HEK293 cells, we demonstra...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi902068b

    authors: Conner MT,Conner AC,Brown JE,Bill RM

    更新日期:2010-02-09 00:00:00

  • Selective inactivation of parvulin-like peptidyl-prolyl cis/trans isomerases by juglone.

    abstract::In contrast to FK506 binding proteins and cyclophilins, the parvulin family of peptidyl-prolyl cis/trans isomerases (PPIases; E.C. 5.2.1.8) cannot be inhibited by either FK506 or cyclosporin A. We have found that juglone, 5-hydroxy-1,4-naphthoquinone, irreversibly inhibits the enzymatic activity of several parvulins, ...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi973162p

    authors: Hennig L,Christner C,Kipping M,Schelbert B,Rücknagel KP,Grabley S,Küllertz G,Fischer G

    更新日期:1998-04-28 00:00:00

  • Redox-dependent structural differences in putidaredoxin derived from homologous structure refinement via residual dipolar couplings.

    abstract::Structural differences in the [2Fe-2S] ferredoxin, putidaredoxin (Pdx), from the camphor hydroxylation pathway of Pseudomonas putida have been investigated as a function of oxidation state of the iron cluster. Pdx is involved in biological electron transfer to cytochrome P450(cam) (CYP101). Redox-dependent differences...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi050152c

    authors: Jain NU,Tjioe E,Savidor A,Boulie J

    更新日期:2005-06-28 00:00:00

  • Phosphoinositide 3-kinase in rat liver nuclei.

    abstract::Biochemical and immunochemical data from the present investigation reveal the existence of a p85/p110 phosphoinositide 3-kinase (PI 3-kinase) in rat liver nuclei. 32P-Labeling of membrane phosphoinositides by incubating intact nuclei with [gamma-32P]ATP results in the formation of [32P]phosphatidyl-inositol 3,4, 5-tri...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi972551g

    authors: Lu PJ,Hsu AL,Wang DS,Yan HY,Yin HL,Chen CS

    更新日期:1998-04-21 00:00:00

  • Kinetic and Bioinformatic Characterization of d-2-Hydroxyglutarate Dehydrogenase from Pseudomonas aeruginosa PAO1.

    abstract::d-2-Hydroxyglutarate dehydrogenase from Pseudomonas aeruginosa PAO1 (PaD2HGDH) catalyzes the oxidation of d-2-hydroxyglutarate to 2-ketoglutarate, which is a necessary step in the serine biosynthetic pathway. The dependence of P. aeruginosa on PaD2HGDH makes the enzyme a potential therapeutic target against P. aerugin...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/acs.biochem.0c00832

    authors: Quaye JA,Gadda G

    更新日期:2020-12-29 00:00:00

  • Chromomycin dimer-DNA oligomer complexes. Sequence selectivity and divalent cation specificity.

    abstract::This paper reports on a solution NMR characterization of the sequence selectivity and metal ion specificity in chromomycin-DNA oligomer complexes in the presence of divalent cations. The sequence selectivity studies have focused on chromomycin complexes with the self-complementary d(A1-A2-G3-G4-C5-C6-T7-T8) duplex con...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi00501a012

    authors: Gao XL,Patel DJ

    更新日期:1990-12-11 00:00:00

  • The red blood cell glucose transporter presents multiple, nucleotide-sensitive sugar exit sites.

    abstract::At any instant, the human erythrocyte sugar transporter presents at least one sugar export site but multiple sugar import sites. The present study asks whether the transporter also presents more than one sugar exit site. We approached this question by analysis of binding of [3H]cytochalasin B (an export conformer liga...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi015586w

    authors: Cloherty EK,Levine KB,Carruthers A

    更新日期:2001-12-25 00:00:00

  • Complex structures between the N-type calcium channel (CaV2.2) and ω-conotoxin GVIA predicted via molecular dynamics.

    abstract::The N-type voltage-gated Ca(2+) channel CaV2.2 is one of the important targets for pain management. ω-Conotoxins isolated from venoms of cone snails, which specifically inhibit CaV2.2, are promising scaffolds for novel analgesics. The inhibitory action of ω-conotoxins on CaV2.2 has been examined experimentally, but th...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi4003327

    authors: Chen R,Chung SH

    更新日期:2013-05-28 00:00:00

  • Modulation of P-glycoprotein phosphorylation and drug transport by sodium butyrate.

    abstract::P-Glycoprotein (Pgp) expression in cell lines derived from tumors arising from cells which normally express Pgp can be increased by sodium butyrate and other differentiating agents. Although the Pgp level increased 25-fold after sodium butyrate treatment in SW620 human colon carcinoma cells, the intracellular accumula...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi00143a002

    authors: Bates SE,Currier SJ,Alvarez M,Fojo AT

    更新日期:1992-07-21 00:00:00

  • Insight into glycan diversity and evolutionary lineage based on comparative Avio-N-glycomics and sialic acid analysis of 88 egg whites of Galloanserae.

    abstract::A large set of glycome information was obtained from egg white proteins of 88 samples from Galloanserae (63 Anseriformes and 25 Galliformes). The data were obtained on whole N-glycan structures and types of sialic acids of these egg whites by glycoblotting-based high-throughput and quantitative glycomics. The results ...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi101940x

    authors: Hirose K,Amano M,Hashimoto R,Lee YC,Nishimura S

    更新日期:2011-05-31 00:00:00

  • An FHA phosphoprotein recognition domain mediates protein EmbR phosphorylation by PknH, a Ser/Thr protein kinase from Mycobacterium tuberculosis.

    abstract::In bacteria, regulatory phosphorylation of proteins at serine and/or threonine residues by Ser/Thr protein kinase (STPK) is an emerging theme in prokaryotic signaling, particularly since the prediction of the occurrence of several STPKs from genome sequencing and sequence surveys. Here we show that protein PknH posses...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi035150b

    authors: Molle V,Kremer L,Girard-Blanc C,Besra GS,Cozzone AJ,Prost JF

    更新日期:2003-12-30 00:00:00

  • Chemical mechanism of a cysteine protease, cathepsin C, as revealed by integration of both steady-state and pre-steady-state solvent kinetic isotope effects.

    abstract::Cathepsin C, or dipeptidyl peptidase I, is a lysosomal cysteine protease of the papain family that catalyzes the sequential removal of dipeptides from the free N-termini of proteins and peptides. Using the dipeptide substrate Ser-Tyr-AMC, cathepsin C was characterized in both steady-state and pre-steady-state kinetic ...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi8007627

    authors: Schneck JL,Villa JP,McDevitt P,McQueney MS,Thrall SH,Meek TD

    更新日期:2008-08-19 00:00:00

  • Substrate-Induced Facilitated Dissociation of the Competitive Inhibitor from the Active Site of O-Acetyl Serine Sulfhydrylase Reveals a Competitive-Allostery Mechanism.

    abstract::By classical competitive antagonism, a substrate and competitive inhibitor must bind mutually exclusively to the active site. The competitive inhibition of O-acetyl serine sulfhydrylase (OASS) by the C-terminus of serine acetyltransferase (SAT) presents a paradox, because the C-terminus of SAT binds to the active site...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/acs.biochem.7b00500

    authors: Singh AK,Ekka MK,Kaushik A,Pandya V,Singh RP,Banerjee S,Mittal M,Singh V,Kumaran S

    更新日期:2017-09-19 00:00:00

  • Membrane fusion activity of the influenza virus hemagglutinin: interaction of HA2 N-terminal peptides with phospholipid vesicles.

    abstract::We have investigated the interaction of a number of synthetic 20-residue peptides, corresponding to the HA2 N-terminus of the influenza virus hemagglutinin (X31 strain), with phospholipid vesicles and monolayers. Besides the wild-type sequence, two peptides were studied with mutations corresponding to those previously...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi00106a020

    authors: Rafalski M,Ortiz A,Rockwell A,van Ginkel LC,Lear JD,DeGrado WF,Wilschut J

    更新日期:1991-10-22 00:00:00

  • The synthetic/editing active site of an aminoacyl-tRNA synthetase: evidence for binding of thiols in the editing subsite.

    abstract::The active site of methionyl-tRNA synthetase (MetRS) possesses two functions: synthetic, which provides Met-tRNA for protein synthesis, and editing, which rejects inadvertently misactivated homocysteine. During editing, the side chain -SH group of homocysteine reacts with its activated carboxyl group forming a cyclic ...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi960344v

    authors: Jakubowski H

    更新日期:1996-06-25 00:00:00

  • Deamidation of Human γS-Crystallin Increases Attractive Protein Interactions: Implications for Cataract.

    abstract::Deamidation of proteins is one of the most prevalent post-translational modifications found upon aging, and in age-onset diseases. Specific asparagine and glutamine residues are often selectively deamidated during this process. In the human lens, deamidation has been shown to occur in many crystallins, but it is not c...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/acs.biochem.5b00185

    authors: Pande A,Mokhor N,Pande J

    更新日期:2015-08-11 00:00:00

  • Formation and reactions of the heme-dioxygen intermediate in the first and second steps of nitric oxide synthesis as studied by stopped-flow spectroscopy under single-turnover conditions.

    abstract::To better understand the mechanism of nitric oxide (NO) synthesis, we studied conversion of N-hydroxy-L-arginine (NOHA) or L-arginine (Arg) to citrulline and NO under single-turnover conditions using the oxygenase domain of neuronal nitric oxide synthase (nNOSoxy) and rapid scanning stopped-flow spectroscopy. When ana...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi9920228

    authors: Boggs S,Huang L,Stuehr DJ

    更新日期:2000-03-07 00:00:00

  • Characteristics of the isolated apical plasmalemma and intracellular tubulovesicles of the gastric acid secreting cells: demonstration of secretagogue-induced membrane mobilization.

    abstract::Separation of the gradient-purified gastric microsome into two membrane subfractions of distinct enzymatic and phospholipid composition has been achieved by mild SDS (0.033% w/v) treatment followed by sucrose gradient centrifugation of the pig and rabbit gastric microsomes. While the high-density membranes had all of ...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi00425a013

    authors: Ray TK,Das PK,Nandi J,Banerjee A,Bandopadhyay S

    更新日期:1988-12-13 00:00:00

  • The heparin binding domain of S-protein/vitronectin binds to complement components C7, C8, and C9 and perforin from cytolytic T-cells and inhibits their lytic activities.

    abstract::S-Protein/vitronectin is a serum glycoprotein that inhibits the lytic activity of the membrane attack complex of complement, i.e., of the complex including the proteins C5b, C6, C7, C8, and C9n. We show that intact S-protein/vitronectin or its cyanogen bromide generated fragments also inhibit the hemolysis mediated by...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi00411a029

    authors: Tschopp J,Masson D,Schäfer S,Peitsch M,Preissner KT

    更新日期:1988-05-31 00:00:00

  • In vitro biosynthesis of UDP-N,N'-diacetylbacillosamine by enzymes of the Campylobacter jejuni general protein glycosylation system.

    abstract::In Campylobacter jejuni 2,4-diacetamido-2,4,6-trideoxy-alpha-d-glucopyranose, termed N,N'-diacetylbacillosamine (Bac2,4diNAc), is the first carbohydrate in the glycoprotein N-linked heptasaccharide. With uridine diphosphate-N-acetylglucosamine (UDP-GlcNAc) as a starting point, two enzymes of the general protein glycos...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi061456h

    authors: Olivier NB,Chen MM,Behr JR,Imperiali B

    更新日期:2006-11-14 00:00:00

  • Electric field induced transient pores in phospholipid bilayer vesicles.

    abstract::A study of the voltage induction of transient pores in phospholipid bilayer vesicles is reported. Unilamellar vesicles (dipalmitoylphosphatidylcholine), with a size distribution of 100 +/- 30 nm, were prepared by the method of Enoch & Strittmatter [Enoch, H., & Strittmatter, P. (1979) Proc. Natl. Acad. Sci. U.S.A. 76,...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi00509a022

    authors: Teissie J,Tsong TY

    更新日期:1981-03-17 00:00:00

  • Characterization of heterogeneous solutions using laser light scattering: study of the tubulin system.

    abstract::Laser light scattering has been applied to a systematic study of a heterogeneous solution of tubulin at low temperature--conditions under which tubulin assembly into microtubules does not take place. Methods of analyzing laser light scattering results obtained from solutions containing multiple components are discusse...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi00645a020

    authors: Gethner JS,Flynn GW,Berne BJ,Gaskin F

    更新日期:1977-12-27 00:00:00

  • Interaction of DNA polymerase I of Escherichia coli with nucleotides. Antagonistic effects of single-stranded polynucleotide homopolymers.

    abstract::Binding of deoxyribonucleoside 5'-triphosphates to DNA polymerase I of Escherichia coli was measured by using a microscale nonequilibrium dialysis method. It allowed rapid and economic measurement of dissociation constants, with negligible interfering side reactions. A stoichiometry of 1 mol of nucleoside 5'-triphosph...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi00335a033

    authors: Muise O,Holler E

    更新日期:1985-07-02 00:00:00

  • Halogen Bonding: A Powerful Tool for Modulation of Peptide Conformation.

    abstract::Halogen bonding is a weak chemical force that has so far mostly found applications in crystal engineering. Despite its potential for use in drug discovery, as a new molecular tool in the direction of molecular recognition events, it has rarely been assessed in biopolymers. Motivated by this fact, we have developed a p...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/acs.biochem.7b00429

    authors: Danelius E,Andersson H,Jarvoll P,Lood K,Gräfenstein J,Erdélyi M

    更新日期:2017-06-27 00:00:00

  • Chromatin condensing functions of the linker histone C-terminal domain are mediated by specific amino acid composition and intrinsic protein disorder.

    abstract::Linker histones bind to the nucleosomes and linker DNA of chromatin fibers, causing changes in linker DNA structure and stabilization of higher order folded and oligomeric chromatin structures. Linker histones affect chromatin structure acting primarily through their approximately 100-residue C-terminal domain (CTD). ...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi801636y

    authors: Lu X,Hamkalo B,Parseghian MH,Hansen JC

    更新日期:2009-01-13 00:00:00

  • Influence of phosphoenolpyruvate and magnesium ions on the quaternary structure of enzyme I of the phosphotransferase system from gram-positive bacteria.

    abstract::Solution X-ray scattering patterns of enzyme I of the phosphotransferase system from Staphylococcus carnosus indicate an increase in radius of gyration and molecular mass in the presence of Mg2+ or both Mg2+ and phosphoenolpyruvate, indicating a partial dimerization of enzyme I. Mg2+ ions are essential for both the di...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi00048a014

    authors: Hübner G,König S,Koch MH,Hengstenberg W

    更新日期:1995-12-05 00:00:00

  • Linker histone interaction shows divalent character with both supercoiled and linear DNA.

    abstract::The interaction of linker histone H1 with both linear and superhelical double-stranded DNA has been investigated at low ionic strengths. Gel mobility retardation experiments demonstrate strikingly different behavior for the two forms of DNA. First, the experiments strongly suggest that linker histone binds to superhel...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi0497704

    authors: Ellen TP,van Holde KE

    更新日期:2004-06-22 00:00:00