Sequence of beta(2)-microglobulin from rhesus macaque ( Macaca mulatta) includes an allelic variation in the 3'-untranslated region.

Abstract:

:The rhesus macaque ( Macaca mulatta) has become a popular animal model for several human infectious diseases, such as HIV (modeled by SIV infection), hepatitis, and malaria. Investigation of T-cell responses in experimental infectious diseases in rhesus macaques has benefited from an expanding understanding of the diversity of macaque MHC class I heavy chains and the restriction of antigen presentation by macaque class I molecules. Here we add to this understanding with the first nucleotide sequences of M. mulatta beta(2)-microglobulin (beta(2)m) mRNA, including a portion of the 3'-untranslated region (3'UTR). In pairwise comparison, the beta(2)m protein of M. mulatta differs from human and chimpanzee beta(2)m by nine amino-acid substitutions (92% identity), and from Macaca fascicularis by one amino-acid difference in the signal peptide region (99% identity). Allelic variations were identified at one site in the 3'UTR. A structural analysis of human or chimpanzee beta(2)m and M. mulatta beta(2)m suggests that the differences cluster in three solvent-exposed clusters and do not involve contacts with the class I heavy chain. We predict that human and macaque beta(2)m should bind interchangeably with the class I heavy chains of the other species, and show that four M. mulatta class I alleles form cell surface complexes with human beta(2)m. Further, we predict that W6/32 (a monoclonal antibody that recognizes a combined epitope of some class I heavy chains and beta(2)m with a subtle species dependence) should bind similarly human or macaque class I molecules that are bound with beta(2)m of either species, supported by evidence of recognition of both heterologous and homologous complexes of macaque class I heavy chains. Our findings contribute to the growing understanding of rhesus macaque histocompatibility antigens and antigen presentation, and to the phylogeny of beta(2)m in primates.

journal_name

Immunogenetics

journal_title

Immunogenetics

authors

Su J,Luscher MA,MacDonald KS

doi

10.1007/s00251-004-0649-2

subject

Has Abstract

pub_date

2004-03-01 00:00:00

pages

873-7

issue

12

eissn

0093-7711

issn

1432-1211

journal_volume

55

pub_type

杂志文章
  • Reptilian class I major histocompatibility complex genes reveal conserved elements in class I structure.

    abstract::The polymerase chain reaction was used to isolate clones with class I major histocompatibility complex sequences from fish (carp), amphibian (axolotl), and two species of reptile (lizard and snake). The lizard and snake clones were used to isolate class I cDNA clones. All the sequences showed the expected evolutionary...

    journal_title:Immunogenetics

    pub_type: 杂志文章

    doi:10.1007/BF00661093

    authors: Grossberger D,Parham P

    更新日期:1992-01-01 00:00:00

  • Physical mapping of the retinoid X receptor B gene in mouse and human.

    abstract::Retinoid X receptors (RXRs) are zinc finger-containing nuclear transcription factors. They belong to the nuclear receptor superfamily that contains retinoid receptors, vitamin D receptors, thyroid hormone receptors, and steroid hormone receptors as well as the so-called orphan receptors. We previously mapped all three...

    journal_title:Immunogenetics

    pub_type: 杂志文章

    doi:10.1007/BF00182317

    authors: Nagata T,Weiss EH,Abe K,Kitagawa K,Ando A,Yara-Kikuti Y,Seldin MF,Ozato K,Inoko H,Taketo M

    更新日期:1995-01-01 00:00:00

  • Lyb-8.2: A new B cell antigen defined and characterized with a monoclonal antibody.

    abstract::A DBA/1 B10.D2-specific monoclonal antibody (CY34) is described which defines a new murine B lymphocyte differentiation antigen designated Lyb-8.2. The ontogeny, strain distribution, and cell-surface density of the antigen were studied by radioimmunoassay and by fluorescence-activated cell sorter (FACS) analysis. Lyb-...

    journal_title:Immunogenetics

    pub_type: 杂志文章

    doi:10.1007/BF00372098

    authors: Symington FW,Subbarao B,Mosier DE,Sprent J

    更新日期:1982-01-01 00:00:00

  • The role of MHC class I allele Mamu-A*07 during SIV(mac)239 infection.

    abstract::Virus-specific CD8(+) T cells play an important role in controlling HIV/SIV replication. These T cells recognize intracellular pathogen-derived peptides displayed on the cell surface by individual MHC class I molecules. In the SIV-infected rhesus macaque model, five Mamu class I alleles have been thoroughly characteri...

    journal_title:Immunogenetics

    pub_type: 杂志文章

    doi:10.1007/s00251-011-0541-9

    authors: Reed JS,Sidney J,Piaskowski SM,Glidden CE,León EJ,Burwitz BJ,Kolar HL,Eernisse CM,Furlott JR,Maness NJ,Walsh AD,Rudersdorf RA,Bardet W,McMurtrey CP,O'Connor DH,Hildebrand WH,Sette A,Watkins DI,Wilson NA

    更新日期:2011-12-01 00:00:00

  • Genomic cloning of novel isotypes of the rainbow trout interleukin-8.

    abstract::A cDNA clone, designated IL-8nL, was obtained by suppression subtractive hybridisation between lipopolysaccharide-stimulated and non-stimulated populations of the rainbow trout macrophage-like cell line, RTS11. IL-8nL was similar but not identical to a recently published sequence of the gene encoding rainbow trout int...

    journal_title:Immunogenetics

    pub_type: 杂志文章

    doi:10.1007/s00251-003-0556-y

    authors: Fujiki K,Gauley J,Bols NC,Dixon B

    更新日期:2003-05-01 00:00:00

  • Divergence between genes but limited allelic polymorphism in two MHC class II A genes in Leach's storm-petrels Oceanodroma leucorhoa.

    abstract::The major histocompatibility complex (MHC) is critical to host-pathogen interactions. Class II MHC is a heterodimer, with α and β subunits encoded by different genes. The peptide-binding groove is formed by the first domain of both subunits (α1 and β1), but studies of class II variation or natural selection focus prim...

    journal_title:Immunogenetics

    pub_type: 杂志文章

    doi:10.1007/s00251-019-01130-z

    authors: Rand LM,Woodward C,May R,Ackerman RA,Tweedie B,Zicarelli TB,Dearborn DC

    更新日期:2019-09-01 00:00:00

  • A mutation in KIR3DS1 that results in truncation and lack of cell surface expression.

    abstract::The KIR gene cluster exhibits a high degree of polymorphism in terms of gene content as well as allelic polymorphism, and data suggest that it is evolving rapidly. The KIR3DL1 locus is one of the most polymorphic loci within this cluster and is unique in that it encodes an activating receptor KIR3DS1, as well as multi...

    journal_title:Immunogenetics

    pub_type: 杂志文章

    doi:10.1007/s00251-007-0240-8

    authors: Martin MP,Pascal V,Yeager M,Phair J,Kirk GD,Hoots K,O'Brien SJ,Anderson SK,Carrington M

    更新日期:2007-10-01 00:00:00

  • Accuracy and coverage assessment of Oryctolagus cuniculus (rabbit) genes encoding immunoglobulins in the whole genome sequence assembly (OryCun2.0) and localization of the IGH locus to chromosome 20.

    abstract::We report on the analyses of genes encoding immunoglobulin heavy and light chains in the rabbit 6.51× whole genome assembly. This OryCun2.0 assembly confirms previous mapping of the duplicated IGK1 and IGK2 loci to chromosome 2 and the IGL lambda light chain locus to chromosome 21. The most frequently rearranged and e...

    journal_title:Immunogenetics

    pub_type: 杂志文章

    doi:10.1007/s00251-013-0722-9

    authors: Gertz EM,Schäffer AA,Agarwala R,Bonnet-Garnier A,Rogel-Gaillard C,Hayes H,Mage RG

    更新日期:2013-10-01 00:00:00

  • Preferred SLA class I/class II haplotype combinations in German Landrace pigs.

    abstract::Major histocompatibility complex (MHC) molecules are responsible for the antigen presentation to T lymphocytes. High recombination rates in the MHC genes, as observed in humans, are believed to serve the evolutionary goal to achieve a high genetic diversity, allowing for a broad and efficient immune response. In a coh...

    journal_title:Immunogenetics

    pub_type: 杂志文章

    doi:10.1007/s00251-016-0946-6

    authors: Gimsa U,Ho CS,Hammer SE

    更新日期:2017-01-01 00:00:00

  • Alteration of the T-cell receptor repertoire in A.CA mice expressing an Ead transgene.

    abstract::In an effort to generate an A.CA mouse expressing Ed, the Ead gene has been introduced into A.CA mice which lack the major histocompatibility complex (MHC) class II E molecule. Flow cytometric analysis shows cell surface expression of the E alpha chain on lymphocytes and macrophages in the transgenic mice. Analysis of...

    journal_title:Immunogenetics

    pub_type: 杂志文章

    doi:10.1007/BF01719237

    authors: Ishikawa S,Chang MY,Diamond B

    更新日期:1991-01-01 00:00:00

  • Impact of a CD4 gene haplotype on the immune response in minipigs.

    abstract::The cluster of differentiation 4 (CD4) molecule functions as a co-receptor for MHC class II binding to TCR in T helper cells. A CD4 epitope deficiency was identified in the swine MeLiM (melanoblastoma-bearing Libechov minipig) strain, a model for spontaneous cutaneous melanoma development and regression. Extensive seq...

    journal_title:Immunogenetics

    pub_type: 杂志文章

    doi:10.1007/s00251-017-1037-z

    authors: Blanc F,Créchet F,Bruneau N,Piton G,Leplat JJ,Andréoletti F,Egidy G,Vincent-Naulleau S,Bourneuf E

    更新日期:2018-04-01 00:00:00

  • Immunoglobulin variable-region diversity in the zebrafish.

    abstract::As part of an investigation of the immune system in the developing zebrafish, Danio rerio, we cloned and characterized a genomic V(H) segment and a number of cDNAs encoding IgM heavy chains. The genomic V(H) has the characteristic features of V(H) in other vertebrates, including a leader segment interrupted by a short...

    journal_title:Immunogenetics

    pub_type: 杂志文章

    doi:10.1007/s002510000255

    authors: Danilova N,Hohman VS,Kim EH,Steiner LA

    更新日期:2000-11-01 00:00:00

  • Gene duplication, allelic diversity, selection processes and adaptive value of MHC class II DRB genes of the bank vole, Clethrionomys glareolus.

    abstract::The generation and maintenance of allelic polymorphism in genes of the major histocompatibility complex (MHC) is a central issue in evolutionary genetics. Recently, the focus has changed from ex situ to in situ populations to understand the mechanisms that determine adaptive MHC polymorphism under natural selection. B...

    journal_title:Immunogenetics

    pub_type: 杂志文章

    doi:10.1007/s00251-007-0205-y

    authors: Axtner J,Sommer S

    更新日期:2007-05-01 00:00:00

  • Codon usage bias and base composition in MHC genes in humans and common chimpanzees.

    abstract::Codon bias and base composition in major histocompatibility complex (MHC) sequences have been studied for both class I and II loci in Homo sapiens and Pan troglodytes. There is low to moderate codon bias for the MHC of humans and chimpanzees. In the class I loci, the same level of moderate codon bias is seen for HLA-B...

    journal_title:Immunogenetics

    pub_type: 杂志文章

    doi:10.1007/s002510050493

    authors: McWeeney SK,Valdes AM

    更新日期:1999-04-01 00:00:00

  • Definition of a novel complementation group in MHC class II deficiency.

    abstract::In this study we analyzed fibroblasts derived from an MHC class II deficiency patient (type III bare lymphocyte syndrome). Northern blot analysis showed that upon induction with IFN-gamma these fibroblasts did not express HLA class II genes and displayed a strongly reduced level of HLA class I gene expression when com...

    journal_title:Immunogenetics

    pub_type: 杂志文章

    doi:10.1007/BF00172153

    authors: Peijnenburg A,Godthelp B,van Boxel-Dezaire A,van den Elsen PJ

    更新日期:1995-01-01 00:00:00

  • C4 gene polymorphism in primates: evolution, generation, and Chido and Rodgers antigenicity.

    abstract::Eleven new C4d genomic primate sequences of the fourth complement factor (C4) have been obtained. Seven of them belong to five species not yet explored for this gene: Pan paniscus (pygmy chimpanzee), Cercopithecus aethiops (green monkey), Macaca mulatta (rhesus monkey), Macaca fascicularis (cynomolgus), and Saguinus o...

    journal_title:Immunogenetics

    pub_type: 杂志文章

    doi:10.1007/BF00177822

    authors: Paz-Artal E,Corell A,Alvarez M,Varela P,Allende L,Madroño A,Rosal M,Arnaiz-Villena A

    更新日期:1994-01-01 00:00:00

  • Study of an H-2Kd mutant strain: C.B6-H-2dm4.

    abstract::A new H-2 mutant involving the H-2d haplotype is described--C.B6-H-2dm4 (dm4). This mutant strain carries a gain and loss mutation which maps to the Kd gene of the H-2 complex. Serological testing comparing the mutant and the parental BALB/cKh strain failed to detect any difference between the two strains and no antib...

    journal_title:Immunogenetics

    pub_type: 杂志文章

    doi:10.1007/BF01561695

    authors: Morgan G,Dellos H,McKenzie IF,Melvold RW

    更新日期:1981-03-01 00:00:00

  • Mutant HLA-A2 antigens as restricting elements for virus-specific cytotoxic T cells.

    abstract::Mutants of the EB virus-transformed cell line T5-1 (HLA-A1, 2; B8, 27), bearing well-characterized alterations in HLA-A2 antigen expression and unable to bind the HLA-A2-specific monoclonal antibody BB7.2, have been tested for their susceptibility to EB virus-specific cytolysis using effector T-cell preparations funct...

    journal_title:Immunogenetics

    pub_type: 杂志文章

    doi:10.1007/BF00403438

    authors: Gaston JS,Wallace LE,Rickinson AB,Epstein MA,Pious D

    更新日期:1984-01-01 00:00:00

  • Leishmania donovani infection in heterozygous and recombinant H-2 haplotype mice.

    abstract::On a B10 (Lshs) genetic background the development of acquired T-cell-mediated immunity to Leishmania donovani infection in mice is under H-2-linked genetic control. Three phenotypic patterns of recovery were previously observed: "early cure" (H-2s, H-2r), "cure" (H-2b) and "noncure" (H-2d, H-2q, H-2f), with cure beha...

    journal_title:Immunogenetics

    pub_type: 杂志文章

    doi:10.1007/BF00368537

    authors: Blackwell JM

    更新日期:1983-01-01 00:00:00

  • Associations of the IL2Ralpha, IL4Ralpha, IL10Ralpha, and IFN (gamma) R1 cytokine receptor genes with AIDS progression in a French AIDS cohort.

    abstract::We have performed an extensive analysis of Th1/Th2 cytokine receptors IL2Ralpha, IL4Ralpha, IL10Ralpha, and IFNgammaR1 gene polymorphisms to evaluate their impact on AIDS progression. The coding regions and promoters of these genes were sequenced in the genetics of resistance to immunodeficiency virus cohort, composed...

    journal_title:Immunogenetics

    pub_type: 杂志文章

    doi:10.1007/s00251-005-0072-3

    authors: Do H,Vasilescu A,Diop G,Hirtzig T,Coulonges C,Labib T,Heath SC,Spadoni JL,Therwath A,Lathrop M,Matsuda F,Zagury JF

    更新日期:2006-04-01 00:00:00

  • B-G cDNA clones have multiple small repeats and hybridize to both chicken MHC regions.

    abstract::We used rabbit antisera to the chicken MHC erythrocyte molecule B-G and to the class I alpha chain (B-F) to screen lambda gt11 cDNA expression libraries made with RNA selected by oligo-dT from bone marrow cells of anemic B19 homozygous chickens. Eight clones were found to encode B-G molecules which hybridize with sequ...

    journal_title:Immunogenetics

    pub_type: 杂志文章

    doi:10.1007/BF02421176

    authors: Kaufman J,Salomonsen J,Skjødt K

    更新日期:1989-01-01 00:00:00

  • Polymorphisms in the human surfactant protein-D (SFTPD) gene: strong evidence that serum levels of surfactant protein-D (SP-D) are genetically influenced.

    abstract::The collectin surfactant protein-D (SP-D) plays a significant role in innate immunity. Epidemiological studies described associations between single nucleotide polymorphisms (SNPs) of the human gene coding surfactant protein-D (SFTPD) and infectious pulmonary diseases. Studies on twins indicated very strong genetic de...

    journal_title:Immunogenetics

    pub_type: 杂志文章

    doi:10.1007/s00251-005-0775-5

    authors: Heidinger K,König IR,Bohnert A,Kleinsteiber A,Hilgendorff A,Gortner L,Ziegler A,Chakraborty T,Bein G

    更新日期:2005-04-01 00:00:00

  • Origin and evolution of the Ig-like domains present in mammalian leukocyte receptors: insights from chicken, frog, and fish homologues.

    abstract::In mammals many natural killer (NK) cell receptors, encoded by the leukocyte receptor complex (LRC), regulate the cytotoxic activity of NK cells and provide protection against virus-infected and tumor cells. To investigate the origin of the Ig-like domains encoded by the LRC genes, a subset of C2-type Ig-like domain s...

    journal_title:Immunogenetics

    pub_type: 杂志文章

    doi:10.1007/s00251-004-0764-0

    authors: Nikolaidis N,Klein J,Nei M

    更新日期:2005-04-01 00:00:00

  • Low frequency of the Mx allele for viral resistance predates recent intensive selection in domestic chickens.

    abstract::Avian influenza is a serious threat to the poultry industry and, as the potential source of a human pandemic virus, to public health. Different Mx alleles have been reported to confer resistance or susceptibility to influenza virus replication, and so knowledge of their frequencies is important when considering the po...

    journal_title:Immunogenetics

    pub_type: 杂志文章

    doi:10.1007/s00251-007-0235-5

    authors: Balkissoon D,Staines K,McCauley J,Wood J,Young J,Kaufman J,Butter C

    更新日期:2007-08-01 00:00:00

  • The functional link between the immune suppression gene and Mhc class II molecules.

    abstract::The immune response to bovine insulin (BI) in the rat is controlled by the major histocompatibility complex (Mhc)-linked immune response gene (Ir-BI) and immune suppression gene (Is-BI). In the present study, we investigated the low responsiveness to BI in the WKAH rat (RT1k) and attempted to explore the functional li...

    journal_title:Immunogenetics

    pub_type: 杂志文章

    doi:10.1007/BF00364426

    authors: Mizuno K,Tsuchimoto S,Matsuno Y,Niiyama T,Fujii H,Natori T,Aizawa M

    更新日期:1988-01-01 00:00:00

  • Characterization of a C3-like cDNA in a coral: phylogenetic implications.

    abstract::C3, C4, and C5 are thiolester-containing proteins (TEPs) of vertebrate complement. The identification of the molecular origin of the TEP family, and more specifically the ancestor protein of complement components C3, C4, and C5, remains a fundamental question. The prevailing paradigm suggests that duplication and dive...

    journal_title:Immunogenetics

    pub_type: 杂志文章

    doi:10.1007/s00251-005-0005-1

    authors: Dishaw LJ,Smith SL,Bigger CH

    更新日期:2005-08-01 00:00:00

  • Nine major HLA class I supertypes account for the vast preponderance of HLA-A and -B polymorphism.

    abstract::Herein, we review the epitope approach to vaccine development, and discuss how knowledge of HLA supertypes might be used as a tool in the development of such vaccines. After reviewing the main structural features of the A2-, A3-, B7-, and B44- supertype alleles, and biological data demonstrating their immunological re...

    journal_title:Immunogenetics

    pub_type: 杂志文章,评审

    doi:10.1007/s002510050594

    authors: Sette A,Sidney J

    更新日期:1999-11-01 00:00:00

  • Binding of nonamer peptides to three HLA-B51 molecules which differ by a single amino acid substitution in the A-pocket.

    abstract::The interaction between 9-mer peptides and HLA-B51 molecules was investigated by quantitative peptide binding assay using RMA-S cells expressing human beta2-microglobulin and HLA-B51 molecules. Of 147 chemically synthesized 9-mer peptides possessing two anchor residues corresponding to the motif of HLA-B*5101 binding ...

    journal_title:Immunogenetics

    pub_type: 杂志文章

    doi:10.1007/BF02440994

    authors: Kikuchi A,Sakaguchi T,Miwa K,Takamiya Y,Rammensee HG,Kaneko Y,Takiguchi M

    更新日期:1996-01-01 00:00:00

  • Differential expression of two Carassius auratus Mx genes in cultured CAB cells induced by grass carp hemorrhage virus and interferon.

    abstract::UV-inactivated GCHV (grass carp hemorrhage virus) is able to induce an antiviral state in cultured CAB cells (crucian carp Carassius auratus blastulae embryonic cells) via the production of interferon (IFN). In the current work, the full-length cDNAs of two Mx genes, termed CaMx1 and CaMx2, have been cloned and sequen...

    journal_title:Immunogenetics

    pub_type: 杂志文章

    doi:10.1007/s00251-004-0658-1

    authors: Zhang YB,Li Q,Gui JF

    更新日期:2004-04-01 00:00:00

  • The opossum MHC genomic region revisited.

    abstract::The gray short-tailed opossum Monodelphis domestica is one of the few marsupial species for which a high quality whole genome sequence is available and the major histocompatibility complex (MHC) region has been annotated. Previous analyses revealed only a single locus within the opossum MHC region, designated Modo-UA1...

    journal_title:Immunogenetics

    pub_type: 杂志文章

    doi:10.1007/s00251-015-0826-5

    authors: Krasnec KV,Sharp AR,Williams TL,Miller RD

    更新日期:2015-04-01 00:00:00