Hybrid filtering of feed stream noise from oscillating yeast cultures by combined Kalman and neural network configurations.

Abstract:

:Large continuous flow bioreactors are often under the influence of noise in the feed stream(s). Prior removal of noise is done by filters based either on specific algorithms or on artificial intelligence. Neither method is perfect. Hybrid filters combine both methods and thereby capitalize on their strengths while minimizing their weaknesses. In this study, a number of hybrid models have been compared for their ability to recover nearly noise-free stable oscillations of continuous flow Saccharomyces cerevisiae cultures from aberrant behavior caused by noise in the feed stream. Each hybrid filter had a different neural network in conjunction with an extended Kalman filter (EKF). The choice of the best configuration depended on the performance index. All hybrid filters were superior to both the EKF and purely neural filters. Along with previous studies of monotonic fermentations, the present results establish the suitability of hybrid neural filters for noise-affected bioreactors.

journal_name

Bioprocess Biosyst Eng

authors

Patnaik PR

doi

10.1007/s00449-007-0113-4

subject

Has Abstract

pub_date

2007-05-01 00:00:00

pages

181-8

issue

3

eissn

1615-7591

issn

1615-7605

journal_volume

30

pub_type

杂志文章
  • Gluconic acid production from sucrose in an airlift reactor using a multi-enzyme system.

    abstract::Sucrose from sugarcane is produced in abundance in Brazil, which provides an opportunity to manufacture other high-value products. Gluconic acid (GA) can be produced by multi-enzyme conversion of sucrose using the enzymes invertase, glucose oxidase, and catalase. In this process, one of the byproducts is fructose, whi...

    journal_title:Bioprocess and biosystems engineering

    pub_type: 杂志文章

    doi:10.1007/s00449-014-1306-2

    authors: Mafra AC,Furlan FF,Badino AC,Tardioli PW

    更新日期:2015-04-01 00:00:00

  • Acetic acid-catalyzed hydrothermal pretreatment of corn stover for the production of bioethanol at high-solids content.

    abstract::Corn stover (CS) was hydrothermally pretreated using CH3COOH (0.3 %, v/v), and subsequently its ability to be utilized for conversion to ethanol at high-solids content was investigated. Pretreatment conditions were optimized employing a response surface methodology (RSM) with temperature and duration as independent va...

    journal_title:Bioprocess and biosystems engineering

    pub_type: 杂志文章

    doi:10.1007/s00449-016-1618-5

    authors: Katsimpouras C,Christakopoulos P,Topakas E

    更新日期:2016-09-01 00:00:00

  • Corrosion in bioprocessing applications.

    abstract::Corrosion in bioprocessing applications is described for a 25-year-old bioprocessing pilot plant facility. Various available stainless steel alloys differ greatly in properties owing to the impact of specific alloying elements and their concentrations. The alloy property evaluated was corrosion resistance as a functio...

    journal_title:Bioprocess and biosystems engineering

    pub_type: 杂志文章,评审

    doi:10.1007/s00449-008-0223-7

    authors: Junker B

    更新日期:2009-01-01 00:00:00

  • Identification of reaction networks for bioprocesses: determination of a partially unknown pseudo-stoichiometric matrix.

    abstract::In this paper we propose a methodology to determine the structure of the pseudo-stoichiometric coefficient matrix K in a mass balance-based model and to identify its coefficients from a set of available data. The first stage consists in estimating the number of reactions that must be taken into account to represent th...

    journal_title:Bioprocess and biosystems engineering

    pub_type: 杂志文章

    doi:10.1007/s00449-005-0407-3

    authors: Bernard O,Bastin G

    更新日期:2005-08-01 00:00:00

  • A biotransformation process for the production of cucurbitacin B from its glycoside using a selected Streptomyces sp.

    abstract::Cucurbitacin B (CuB) and its glycoside, cucurbitacin B 2-o-β-D-glucoside (CuBg), abundantly occur in the pedicels of Cucumis melo. Compared with CuB, CuBg is not efficiently extracted from the pedicels. Furthermore, the anticancer activity of CuBg is lower than that of the aglycone. A process for CuBg biotransformatio...

    journal_title:Bioprocess and biosystems engineering

    pub_type: 杂志文章

    doi:10.1007/s00449-016-1621-x

    authors: Mei J,Li S,Jin H,Tang L,Yi Y,Wang H,Ying G

    更新日期:2016-09-01 00:00:00

  • Development of mechanistically based model for simulating soluble microbial products generation in an aerated/non-aerated SBR.

    abstract::Soluble microbial products (SMPs) are considered as the main organic components in wastewater treatment plant effluent from biological wastewater treatment systems. To investigate and explore SMP metabolism pathway for further treatment and control, two innovative mechanistically based activated sludge models were dev...

    journal_title:Bioprocess and biosystems engineering

    pub_type: 杂志文章

    doi:10.1007/s00449-011-0566-3

    authors: Fan J,Ding Y,Qiu Z,Li W,Lu S

    更新日期:2011-11-01 00:00:00

  • Enhancement of oxygen mass transfer in stirred bioreactors using oxygen-vectors 2. Propionibacterium shermanii broths.

    abstract::The previous works on simulated broths are continued and developed for Propionibacterium shermanii broths. The obtained results indicated the considerable increase of kLa in presence of n-dodecane as oxygen-vector and the existence of a certain value of hydrocarbon concentration that corresponds to the maximum mass tr...

    journal_title:Bioprocess and biosystems engineering

    pub_type: 杂志文章

    doi:10.1007/s00449-005-0416-2

    authors: Galaction AI,Cascaval D,Turnea M,Folescu E

    更新日期:2005-07-01 00:00:00

  • Acetylcholinesterase biosensors based on ionic liquid functionalized carbon nanotubes and horseradish peroxidase for monocrotophos determination.

    abstract::Long-term and excessive use of monocrotophos (MPs) pesticide leads to an accumulation of MPs residues in agricultural products. Electrochemical biosensor technology was developed as a simple and efficient method for detecting MPs. However, commercial acetylcholinesterase (AChE) sensors are not applied in practical MPs...

    journal_title:Bioprocess and biosystems engineering

    pub_type: 杂志文章

    doi:10.1007/s00449-019-02226-2

    authors: Jiaojiao X,Bin Z,Pengyun W,Qing L,Xin S,Rui J

    更新日期:2020-02-01 00:00:00

  • Soybean bio-refinery platform: enzymatic process for production of soy protein concentrate, soy protein isolate and fermentable sugar syrup.

    abstract::Soybean carbohydrate is often found to limit the use of protein in soy flour as food and animal feed due to its indigestibility to monogastric animal. In the current study, an enzymatic process was developed to produce not only soy protein concentrate and soy protein isolate without indigestible carbohydrate but also ...

    journal_title:Bioprocess and biosystems engineering

    pub_type: 杂志文章

    doi:10.1007/s00449-016-1626-5

    authors: Loman AA,Islam SM,Li Q,Ju LK

    更新日期:2016-10-01 00:00:00

  • Effects of some inhibitors on the growth and lipid accumulation of oleaginous yeast Rhodosporidium toruloides and preparation of biodiesel by enzymatic transesterification of the lipid.

    abstract::Microbial lipid produced using yeast fermentation with inexpensive carbon sources such as lignocellulosic hydrolyzate can be an alternative feedstock for biodiesel production. Several inhibitors that can be generated during acid hydrolysis of lignocellulose were added solely or together into the culture medium to stud...

    journal_title:Bioprocess and biosystems engineering

    pub_type: 杂志文章

    doi:10.1007/s00449-012-0684-6

    authors: Zhao X,Peng F,Du W,Liu C,Liu D

    更新日期:2012-08-01 00:00:00

  • Immobilization of horseradish peroxidase onto kaolin.

    abstract::Kaolin showed as a very perspective carrier for the enzyme immobilization and it was used for the adsorption of horseradish peroxidase (HRP). The effects of the enzyme concentration and pH on the immobilization efficiency were studied in the reaction with pyrogallol and anthraquinone dye C.I. Acid Violet 109 (AV 109)....

    journal_title:Bioprocess and biosystems engineering

    pub_type: 杂志文章

    doi:10.1007/s00449-015-1529-x

    authors: Šekuljica NŽ,Prlainović NŽ,Jovanović JR,Stefanović AB,Djokić VR,Mijin DŽ,Knežević-Jugović ZD

    更新日期:2016-03-01 00:00:00

  • A general inhibition kinetics model for ethanol production using a novel carbon source: sodium gluconate.

    abstract::In this study, sodium gluconate was applied as a novel carbon source for the fuel ethanol production using an engineered Escherichia coli strain KO11 in batch fermentations. Ethanol and acetic acid were produced as two major products as well as small amount of lactic acid during the fermentation. Compared to the conve...

    journal_title:Bioprocess and biosystems engineering

    pub_type: 杂志文章

    doi:10.1007/s00449-013-0938-y

    authors: Wu W,Fan Z

    更新日期:2013-11-01 00:00:00

  • Modeling synchronous growth of bacterial populations in phased cultivation.

    abstract::The phasing technique is a method for synchronizing cell populations in a bioreactor. Periodic changes of substrate supply and depletion can provoke a cell cycle phasing of originally stochastic scattered proliferation patterns. Synchronized cell populations characterized by changes in DNA content distribution can be ...

    journal_title:Bioprocess and biosystems engineering

    pub_type: 杂志文章

    doi:10.1007/s00449-007-0180-6

    authors: Noack S,Klöden W,Bley T

    更新日期:2008-08-01 00:00:00

  • Process modeling of the lipase-catalyzed dynamic kinetic resolution of (R, S)-suprofen 2,2,2-trifluoroethyl thioester in a hollow-fiber membrane.

    abstract::A Candida rugosa lipase immobilized on polypropylene powder was employed as the biocatalyst for the enantioselective hydrolysis of (R, S)-suprofen 2,2,2-trifluorothioester in cyclohexane, in which trioctylamine was added as the catalyst to perform in situ racemization of the remaining (R)-thioester. A hollow-fiber mem...

    journal_title:Bioprocess and biosystems engineering

    pub_type: 杂志文章

    doi:10.1007/s00449-004-0379-8

    authors: Wang LW,Cheng YC,Tsai SW

    更新日期:2004-12-01 00:00:00

  • Application of reverse micelle extraction process for amylase recovery using response surface methodology.

    abstract::The effect of different process variables of reverse micelle extraction process like pH, addition of surfactant (AOT) concentration and potassium chloride (KCl) concentration on amylase recovery has been studied and analysed. Solid-state fermentation was used for the production of amylase enzyme. Response surface meth...

    journal_title:Bioprocess and biosystems engineering

    pub_type: 杂志文章

    doi:10.1007/s00449-007-0172-6

    authors: Bera MB,Panesar PS,Panesar R,Singh B

    更新日期:2008-06-01 00:00:00

  • Remote engineering for a cheese whey biorefinery: an Internet-based application for process design, economic analysis, monitoring, and control of multiple plant sites.

    abstract::The proteolysis of cheese whey with the aid of immobilized enzymes is an attractive alternative for this by-product of the dairy industry. Among some possible applications for whey protein hydrolysates, one may cite their use as protein source for individuals with reduced capacity of digestion, or with genetic metabol...

    journal_title:Bioprocess and biosystems engineering

    pub_type: 杂志文章

    doi:10.1007/s00449-008-0222-8

    authors: Pinto GA,Giordano RL,Giordano RC

    更新日期:2009-01-01 00:00:00

  • Production of manganese peroxidase and laccase in a solid-state bioreactor and modeling of enzyme production kinetics.

    abstract::Lignin-modifying enzymes have various promising applications such as biobleaching, biopulping, the functionalization of lignocellulosic materials, the modification of wood fibers, the remediation of contaminated soil and effluents, as well as improvement of the enzymatic hydrolysis of lignocellulosic substrates. In th...

    journal_title:Bioprocess and biosystems engineering

    pub_type: 杂志文章

    doi:10.1007/s00449-014-1243-0

    authors: Moilanen U,Winquist E,Mattila T,Hatakka A,Eerikäinen T

    更新日期:2015-01-01 00:00:00

  • Engineering and cell attachment properties of human fibronectin-fibrinogen scaffolds for use in tissue engineered blood vessels.

    abstract::Tissue engineered constructs reported to date have been prepared primarily from poly(glycolic) acid or collagen scaffolds onto which cells are grown and matured. In this paper we report experimental data to demonstrate the use of a natural, human protein, as a tubular scaffold for vascular grafting. Using a manual and...

    journal_title:Bioprocess and biosystems engineering

    pub_type: 杂志文章

    doi:10.1007/s004490100268

    authors: Harding SI,Afoke A,Brown RA,MacLeod A,Shamlou PA,Dunnill P

    更新日期:2002-04-01 00:00:00

  • Comprehensive assessment of the L-lysine production process from fermentation of sugarcane molasses.

    abstract::L-Lysine is an essential amino acid that can be produced by chemical processes from fossil raw materials, as well as by microbial fermentation, the latter being a more efficient and environmentally friendly procedure. In this work, the production process of L-lysine-HCl is studied using a systematic approach based on ...

    journal_title:Bioprocess and biosystems engineering

    pub_type: 杂志文章

    doi:10.1007/s00449-017-1766-2

    authors: Anaya-Reza O,Lopez-Arenas T

    更新日期:2017-07-01 00:00:00

  • Construction of a high efficiency copper adsorption bacterial system via peptide display and its application on copper dye polluted wastewater.

    abstract::For the construction of an efficient copper waste treatment system, a cell surface display strategy was employed. The copper adsorption ability of recombinant bacterial strains displaying three different copper binding peptides were evaluated in LB Luria-Bertani medium (LB), artificial wastewater, and copper phthalocy...

    journal_title:Bioprocess and biosystems engineering

    pub_type: 杂志文章

    doi:10.1007/s00449-015-1447-y

    authors: Maruthamuthu MK,Nadarajan SP,Ganesh I,Ravikumar S,Yun H,Yoo IK,Hong SH

    更新日期:2015-11-01 00:00:00

  • Comparison of sulfuric and hydrochloric acids as catalysts in hydrolysis of Kappaphycus alvarezii (cottonii).

    abstract::In this study, hydrolysis of marine algal biomass Kappaphhycus alvarezii using two different acid catalysts was examined with the goal of identifying optimal reaction conditions for the formation of sugars and by-products. K. alvarezii were hydrolyzed by autoclave using sulfuric acid or hydrochloric acid as catalyst w...

    journal_title:Bioprocess and biosystems engineering

    pub_type: 杂志文章

    doi:10.1007/s00449-011-0609-9

    authors: Meinita MD,Hong YK,Jeong GT

    更新日期:2012-01-01 00:00:00

  • Optimization and production of pyrrolidone antimicrobial agent from marine sponge-associated Streptomyces sp. MAPS15.

    abstract::Twenty-nine actinobacterial strains were isolated from marine sponge Spongia officinalis and screened for antagonistic activity against various bacterial and fungal pathogens. The active antibiotic producer MAPS15 was identified as Streptomyces sp. using 16S rRNA phylogenetic analysis. The critical control factors wer...

    journal_title:Bioprocess and biosystems engineering

    pub_type: 杂志文章

    doi:10.1007/s00449-013-1023-2

    authors: Sathiyanarayanan G,Gandhimathi R,Sabarathnam B,Seghal Kiran G,Selvin J

    更新日期:2014-03-01 00:00:00

  • Cross-linking of horseradish peroxidase adsorbed on polycationic films: utilization for direct dye degradation.

    abstract::Horseradish peroxidase (HRP) was immobilized on the polyaniline (PANI) grafted polyacrylonitrile (PAN) films. The maximum HRP immobilization capacity of the PAN-g-PANI-3 film was 221 μg/cm(2). The HRP-immobilized PAN-g-PANI-3 film retained 79 % of the activity of the same quantity free enzyme. The HRP-immobilized PAN-...

    journal_title:Bioprocess and biosystems engineering

    pub_type: 杂志文章

    doi:10.1007/s00449-012-0724-2

    authors: Bayramoglu G,Altintas B,Yakup Arica M

    更新日期:2012-10-01 00:00:00

  • Kinetic models of ribonucleic acid fermentation and continuous culture by Candida tropicalis no.121.

    abstract::During ribonucleic acid fermentation, the fermentative processes were researched at pH controlled at 4.0 and under natural conditions. Unstructured models in a 50-L airlift fermentor were established for batch RNA production at pH 4.0 using the Verhulst equation for microbial growth, the Luedeking-Piret equation for p...

    journal_title:Bioprocess and biosystems engineering

    pub_type: 杂志文章

    doi:10.1007/s00449-011-0580-5

    authors: Li B,Chen X,Ren H,Li L,Xiong J,Bai J,Chen Y,Wu J,Ying H

    更新日期:2012-03-01 00:00:00

  • Fed-batch polyhydroxybutyrate production by Paraburkholderia sacchari from a ternary mixture of glucose, xylose and arabinose.

    abstract::Polyhydroxybutyrate (PHB) is a biodegradable bioplastic that is comparable with many petroleum-based plastics in terms of mechanical properties and is highly biocompatible. Lignocellulosic biomass conversion into PHB can increase profit and add sustainability. Glucose, xylose and arabinose are the main monomer sugars ...

    journal_title:Bioprocess and biosystems engineering

    pub_type: 杂志文章

    doi:10.1007/s00449-020-02434-1

    authors: Li M,Wilkins MR

    更新日期:2021-01-01 00:00:00

  • Carotene-degrading activities from Bjerkandera adusta possess an application in detergent industries.

    abstract::Four extracellular enzymes, a versatile peroxidase, a manganese peroxidase, a dye-decolorizing peroxidase and a lignin peroxidase were discovered in liquid cultures of the basidiomycete Bjerkandera adusta. All of them cleaved β-carotene effectively. Expression was enhanced in the presence of β-carotene or Coomassie Br...

    journal_title:Bioprocess and biosystems engineering

    pub_type: 杂志文章

    doi:10.1007/s00449-015-1361-3

    authors: Linke D,Leonhardt R,Eisele N,Petersen LM,Riemer S,Nimtz M,Berger RG

    更新日期:2015-06-01 00:00:00

  • Covalent immobilization of Kluyveromyces fragilis β-galactosidase on magnetic nanosized epoxy support for synthesis of galacto-oligosaccharide.

    abstract::The novel magnetic nanobeads with epoxy groups on the surface were prepared from glycidyl methacrylate (GMA), ethylene glycol dimethacrylate (EGDMA) and hydroxyethyl methacrylate (HEMA) via emulsifier-free emulsion polymerisation, and they were characterized by scanning electron microscopy and vibrating sample magneto...

    journal_title:Bioprocess and biosystems engineering

    pub_type: 杂志文章

    doi:10.1007/s00449-012-0716-2

    authors: Liu H,Liu J,Tan B,Zhou F,Qin Y,Yang R

    更新日期:2012-10-01 00:00:00

  • Broad-spectrum electrochemical immunosensor based on one-step electrodeposition of AuNP-Abs and Prussian blue nanocomposite for organophosphorus pesticide detection.

    abstract::Broad-spectrum antibodies can effectively recognize substances with similar structures and have broad application prospects in field rapid detection. In this study, broad-spectrum antibodies (Abs) against organophosphorus pesticides (OPs) were used as sensitive recognition elements, which could effectively recognize m...

    journal_title:Bioprocess and biosystems engineering

    pub_type: 杂志文章

    doi:10.1007/s00449-020-02472-9

    authors: Dong H,Zhao Q,Li J,Xiang Y,Liu H,Guo Y,Yang Q,Sun X

    更新日期:2020-11-08 00:00:00

  • A homofermentative Bacillus sp. BC-001 and its performance as a potential L-lactate industrial strain.

    abstract::Bacillus sp. BC-001 was first reported as a potent thermotolerant and homofermentative strain for an industrial-scale L-lactate production. In a flask culture, this isolate fermented both glucose and sucrose to lactate with high yield (0.96 and 0.87 g/g) and productivity (2.8 and 2.6 g/L h), respectively. The higher l...

    journal_title:Bioprocess and biosystems engineering

    pub_type: 杂志文章

    doi:10.1007/s00449-017-1833-8

    authors: Thitiprasert S,Kodama K,Tanasupawat S,Prasitchoke P,Rampai T,Prasirtsak B,Tolieng V,Piluk J,Assabumrungrat S,Thongchul N

    更新日期:2017-12-01 00:00:00

  • Recombinase polymerase amplification combined with lateral flow dipstick for equipment-free detection of Salmonella in shellfish.

    abstract::Salmonella is a major pathogen that causes acute foodborne outbreaks worldwide. Seafood, particularly shellfish, is a proven source of Salmonella spp. infection because many people prefer to eat it raw or lightly cooked. However, traditional identification methods are too time-consuming and complex to detect contamina...

    journal_title:Bioprocess and biosystems engineering

    pub_type: 杂志文章

    doi:10.1007/s00449-018-1895-2

    authors: Gao W,Huang H,Zhu P,Yan X,Fan J,Jiang J,Xu J

    更新日期:2018-05-01 00:00:00