Comparison of the molecular profiles of human embryonic and induced pluripotent stem cells of isogenic origin.

Abstract:

:Many studies have compared the genetic and epigenetic profiles of human induced pluripotent stem cells (hiPSCs) to human embryonic stem cells (hESCs) and yet the picture remains unclear. To address this, we derived a population of neural precursor cells (NPCs) from the H1 (WA01) hESC line and generated isogenic iPSC lines by reprogramming. The gene expression and methylation profile of three lines were compared to the parental line and intermediate NPC population. We found no gene probe with expression that differed significantly between hESC and iPSC samples under undifferentiated or differentiated conditions. Analysis of the global methylation pattern also showed no significant difference between the two PSC populations. Both undifferentiated populations were distinctly different from the intermediate NPC population in both gene expression and methylation profiles. One point to note is that H1 is a male line and so extrapolation to female lines should be cautioned. However, these data confirm our previous findings that there are no significant differences between hESCs and hiPSCs at the gene expression or methylation level.

journal_name

Stem Cell Res

journal_title

Stem cell research

authors

Mallon BS,Hamilton RS,Kozhich OA,Johnson KR,Fann YC,Rao MS,Robey PG

doi

10.1016/j.scr.2013.11.010

subject

Has Abstract

pub_date

2014-03-01 00:00:00

pages

376-86

issue

2

eissn

1873-5061

issn

1876-7753

pii

S1873-5061(13)00172-4

journal_volume

12

pub_type

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