Abstract:
:To account for sex as a biological variable, it is sometimes necessary to identify the sex of an embryo or embryonic cell that was used to generate libraries for RNA sequencing, without the sex being known a priori. The preferred approach for this would take advantage of the mRNA data, rather than relying on other methods that require separation and analysis of genomic DNA or diversion of limiting RNA for other assays. We describe here a method that has been optimized for this purpose in samples of rhesus monkey and mouse embryos. This method is broadly applicable to any species for which a sufficiently well characterized genome and knowledge of polymorphisms are available, and for embryos that are transcriptionally active and expressing their genome.
journal_name
Physiol Genomicsjournal_title
Physiological genomicsauthors
Midic U,VandeVoort CA,Latham KEdoi
10.1152/physiolgenomics.00001.2018subject
Has Abstractpub_date
2018-08-01 00:00:00pages
628-635issue
8eissn
1094-8341issn
1531-2267journal_volume
50pub_type
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