Transgenerational epigenetics: Inheritance of global cytosine methylation and methylation-related epigenetic markers in the shrub Lavandula latifolia.

Abstract:

PREMISE OF THE STUDY:The ecological and evolutionary significance of natural epigenetic variation (i.e., not based on DNA sequence variants) variation will depend critically on whether epigenetic states are transmitted from parents to offspring, but little is known on epigenetic inheritance in nonmodel plants. METHODS:We present a quantitative analysis of transgenerational transmission of global DNA cytosine methylation (= proportion of all genomic cytosines that are methylated) and individual epigenetic markers (= methylation status of anonymous MSAP markers) in the shrub Lavandula latifolia. Methods based on parent-offspring correlations and parental variance component estimation were applied to epigenetic features of field-growing plants ('maternal parents') and greenhouse-grown progenies. Transmission of genetic markers (AFLP) was also assessed for reference. KEY RESULTS:Maternal parents differed significantly in global DNA cytosine methylation (range = 21.7-36.7%). Greenhouse-grown maternal families differed significantly in global methylation, and their differences were significantly related to maternal origin. Methylation-sensitive amplified polymorphism (MSAP) markers exhibited significant transgenerational transmission, as denoted by significant maternal variance component of marker scores in greenhouse families and significant mother-offspring correlations of marker scores. CONCLUSIONS:Although transmission-related measurements for global methylation and MSAP markers were quantitatively lower than those for AFLP markers taken as reference, this study has revealed extensive transgenerational transmission of genome-wide global cytosine methylation and anonymous epigenetic markers in L. latifolia. Similarity of results for global cytosine methylation and epigenetic markers lends robustness to this conclusion, and stresses the value of considering both types of information in epigenetic studies of nonmodel plants.

journal_name

Am J Bot

authors

Herrera CM,Alonso C,Medrano M,Pérez R,Bazaga P

doi

10.1002/ajb2.1074

subject

Has Abstract

pub_date

2018-04-01 00:00:00

pages

741-748

issue

4

eissn

0002-9122

issn

1537-2197

journal_volume

105

pub_type

杂志文章
  • The four-celled female gametophyte of Illicium (Illiciaceae; Austrobaileyales): implications for understanding the origin and early evolution of monocots, eumagnoliids,and eudicots.

    abstract::The recent consensus that Amborellaceae, Nymphaeales, and Austrobaileyales form the three earliest-diverging lineages of angiosperms has led comparative biologists to reconsider the origin and early developmental evolution of the angiosperm seven-celled/eight-nucleate (Polygonum-type) female gametophyte. Illicium mexi...

    journal_title:American journal of botany

    pub_type: 杂志文章

    doi:10.3732/ajb.91.3.332

    authors: Williams JH,Friedman WE

    更新日期:2004-03-01 00:00:00

  • Low flower-size variation in bilaterally symmetrical flowers: Support for the pollination precision hypothesis.

    abstract:PREMISE OF THE STUDY:The evolutionary shift from radial to bilateral symmetry in flowers is generally associated with the evolution of low flower-size variation. This phenomenon supports the hypothesis that the lower size variation in bilateral flowers can be attributed to low pollinator diversity. In this study, we pr...

    journal_title:American journal of botany

    pub_type: 杂志文章

    doi:10.3732/ajb.1500371

    authors: Nikkeshi A,Kurimoto D,Ushimaru A

    更新日期:2015-12-01 00:00:00

  • The beta-diversity of species interactions: Untangling the drivers of geographic variation in plant-pollinator diversity and function across scales.

    abstract:PREMISE OF THE STUDY:Geographic patterns of biodiversity have long inspired interest in processes that shape the assembly, diversity, and dynamics of communities at different spatial scales. To study mechanisms of community assembly, ecologists often compare spatial variation in community composition (beta-diversity) a...

    journal_title:American journal of botany

    pub_type: 杂志文章

    doi:10.3732/ajb.1500079

    authors: Burkle LA,Myers JA,Belote RT

    更新日期:2016-01-01 00:00:00

  • A subgeneric classification of Selaginella (Selaginellaceae).

    abstract:PREMISE OF THE STUDY:The lycophyte family Selaginellaceae includes approximately 750 herbaceous species worldwide, with the main species richness in the tropics and subtropics. We recently presented a phylogenetic analysis of Selaginellaceae based on DNA sequence data and, with the phylogeny as a framework, the study d...

    journal_title:American journal of botany

    pub_type: 杂志文章

    doi:10.3732/ajb.1600288

    authors: Weststrand S,Korall P

    更新日期:2016-12-01 00:00:00

  • Relation of ramet size to acorn production in five oak species of xeric upland habitats in south-central Florida.

    abstract::This study examined variation in two components of acorn production. Percentage of bearing ramets (stems) and number of acorns per bearing ramet were examined in five clonal oaks in three xeric habitats of south-central peninsular Florida in relation to ramet size within and between species and vegetative associations...

    journal_title:American journal of botany

    pub_type: 杂志文章

    doi:10.3732/ajb.89.1.124

    authors: Abrahamson WG,Layne JN

    更新日期:2002-01-01 00:00:00

  • Molecular systematics of Apiaceae subfamily Apioideae: phylogenetic analyses of nuclear ribosomal DNA internal transcribed spacer and plastid RPO C1 intron sequences.

    abstract::Evolutionary relationships among representatives of Apiaceae (Umbelliferae) subfamily Apioideae have been inferred from phylogenetic analyses of nuclear ribosomal DNA internal transcribed spacer (ITS 1 and ITS 2) and plastid rpoC1 intron sequences. High levels of nucleotide sequence variation preclude the use of the I...

    journal_title:American journal of botany

    pub_type: 杂志文章

    doi:

    authors: Downie S,Ramanath S,Katz-Downie D,Llanas E

    更新日期:1998-04-01 00:00:00

  • Long-distance pine pollen still germinates after meso-scale dispersal.

    abstract::Viability of long-distance pollen links ecological models to the genetic structure of forest tree populations, determining how forests will adapt to climate change and how far genes flow from genetically modified (GM) pine plantations. Addressing this landscape-scale inquiry is feasible when the pollen source, the del...

    journal_title:American journal of botany

    pub_type: 杂志文章

    doi:10.3732/ajb.0900255

    authors: Williams CG

    更新日期:2010-05-01 00:00:00

  • New findings on the pollination biology of Mauritia flexuosa (Arecaceae) in Roraima, Brazil: linking dioecy, wind, and habitat.

    abstract:UNLABELLED: PREMISE OF THE STUDY:Despite the ecological, economic, and cultural importance of the palm Mauritia flexuosa in Amazonia, knowledge of its reproductive biology is scarce. Previous observations of this species suggested beetles as the probable pollinator, but experimental work to confirm this hypothesis was...

    journal_title:American journal of botany

    pub_type: 杂志文章

    doi:10.3732/ajb.1200446

    authors: Khorsand Rosa R,Koptur S

    更新日期:2013-03-01 00:00:00

  • IRIS NELSONII (IRIDACEAE): ORIGIN AND GENETIC COMPOSITION OF A HOMOPLOID HYBRID SPECIES.

    abstract::Nuclear and chloroplast DNA variation was assayed for two populations of Louisiana irises (Bayou Teche and Young's Coulee) that demonstrated extreme morphological variation and for a sample of the putative hybrid species, Iris nelsonii. The genetic markers examined in this analysis were diagnostic for either Iris fulv...

    journal_title:American journal of botany

    pub_type: 杂志文章

    doi:10.1002/j.1537-2197.1993.tb13843.x

    authors: Arnold ML

    更新日期:1993-05-01 00:00:00

  • A smaller Macadamia from a more vagile tribe: inference of phylogenetic relationships, divergence times, and diaspore evolution in Macadamia and relatives (tribe Macadamieae; Proteaceae).

    abstract::Tribe Macadamieae (91 spp., 16 genera; Proteaceae) is widespread across the southern hemisphere on all major fragments of Gondwana except New Zealand and India. Macadamia is cultivated outside its natural range as a "nut" crop (notably in Hawaii, where it is the principal orchard crop). We sampled seven DNA regions an...

    journal_title:American journal of botany

    pub_type: 杂志文章

    doi:10.3732/ajb.0700006

    authors: Mast AR,Willis CL,Jones EH,Downs KM,Weston PH

    更新日期:2008-07-01 00:00:00

  • Origin and relationships of Saintpaulia (Gesneriaceae) based on ribosomal DNA internal transcribed spacer (ITS) sequences.

    abstract::Phylogenetic relationships of eight species of Saintpaulia H. Wendl., 19 species of Streptocarpus Lindl. (representing all major growth forms within the genus), and two outgroups (Haberlea rhodopensis Friv., Chirita spadiciformis W. T. Wang) were examined using comparative nucleotide sequences from the two internal tr...

    journal_title:American journal of botany

    pub_type: 杂志文章

    doi:

    authors: Moller M,Cronk Q

    更新日期:1997-07-01 00:00:00

  • Variation in the strength of association among pollination systems and floral traits: evolutionary changes in the floral traits of Bornean gingers (Zingiberaceae).

    abstract:UNLABELLED: PREMISE OF THE STUDY:Diversification of floral traits in angiosperms is often attributed to have been driven by adaptations to pollinators. Nevertheless, phylogenetic studies on the relationships among evolutionary changes in floral traits and pollination systems are still limited. We examined the relation...

    journal_title:American journal of botany

    pub_type: 杂志文章

    doi:10.3732/ajb.1200359

    authors: Sakai S,Kawakita A,Ooi K,Inoue T

    更新日期:2013-03-01 00:00:00

  • Effects of inbreeding on male function and self-fertility in the partially self-incompatible herb Campanula rapunculoides (Campanulaceae).

    abstract::We examined the effect of inbreeding on fitness (through both male and female functions) and changes in self-fertility in the partially self-incompatible species Campanula rapunculoides. Individuals in natural populations of C. rapunculoides varied extensively in their strength of self-incompatibility (SI). We crossed...

    journal_title:American journal of botany

    pub_type: 杂志文章

    doi:10.3732/ajb.90.12.1736

    authors: Good-Avila SV,Nagel T,Vogler DW,Stephenson AG

    更新日期:2003-12-01 00:00:00

  • Abiotic conditions affect floral antagonists and mutualists of Impatiens capensis (Balsaminaceae).

    abstract:PREMISE OF THE STUDY:While the effect of abiotic factors on leaf herbivory is well known, the relative importance of abiotic conditions influencing both mutualists and antagonists is less well understood. Species interactions could enhance or reduce the direct effects of abiotic factors, depending on how mutualists and...

    journal_title:American journal of botany

    pub_type: 杂志文章

    doi:10.3732/ajb.1200460

    authors: Soper Gorden NL,Adler LS

    更新日期:2013-04-01 00:00:00

  • Fruits of Koelreuteria (Sapindaceae) from the Cenozoic throughout the northern hemisphere: their ecological, evolutionary, and biogeographic implications.

    abstract:PREMISE OF THE STUDY:Koelreuteria (Sapindaceae) has four extant deciduous tree species, disjunctly distributed in eastern Asia and the Fiji Islands. While K. paniculata is widely cultivated, the biogeographic origin and evolutionary history of Koelreuteria remain unclear. METHODS:Fruits, pollen, wood, and leaves of cl...

    journal_title:American journal of botany

    pub_type: 杂志文章

    doi:10.3732/ajb.1200415

    authors: Wang Q,Manchester SR,Gregor HJ,Shen S,Li ZY

    更新日期:2013-02-01 00:00:00

  • Sexual and natural selection on pollen morphology in Taraxacum.

    abstract:PREMISE:Spiny pollen has evolved independently in multiple entomophilous lineages. Sexual selection may act on exine traits that facilitate male mating success by influencing the transfer of pollen from the anther to the body of the pollinator, while natural selection acts to increase pollen survival. We postulated tha...

    journal_title:American journal of botany

    pub_type: 杂志文章

    doi:10.1002/ajb2.1428

    authors: Lynn A,Piotter E,Harrison E,Galen C

    更新日期:2020-02-01 00:00:00

  • Associations between leaf structure, orientation, and sunlight exposure in five Western Australian communities.

    abstract::Five plant communities in Western Australia, as well as selected desert and Rocky Mountain species of the western USA, were surveyed to evaluate associations among leaf structure, orientational properties, and the sunlight exposure and precipitation characteristic of each community. Selected leaf structural features h...

    journal_title:American journal of botany

    pub_type: 杂志文章

    doi:

    authors: Smith W,Bell D,Shepherd K

    更新日期:1998-01-01 00:00:00

  • Rediscovery of Pedilanthus coalcomanensis (Euphorbiaceae), a threatened endemic Mexican species.

    abstract::Pedilanthus coalcomanensis was described from specimens collected by George B. Hinton in 1941 but was not collected again until 1999, when we found it in a tropical deciduous forest near Tehuantepec, in Chinicuila, Michoacán, Mexico. After analyzing Hinton's original collection notes, we concluded that this is the typ...

    journal_title:American journal of botany

    pub_type: 杂志文章

    doi:10.3732/ajb.89.9.1485

    authors: Lomelí-Sención JA,Sahagún-Godínez E

    更新日期:2002-09-01 00:00:00

  • Northern hemisphere biogeography of Cerastium (Caryophyllaceae): insights from phylogenetic analysis of noncoding plastidnucleotide sequences.

    abstract::Phylogenetic relationships and biogeography of the genus Cerastium were studied using sequences of three noncoding plastid DNA regions (trnL intron, trnL-trnF spacer, and psbA-trnH spacer). A total of 57 Cerastium taxa was analyzed using two species of the putative sister genus Stellaria as outgroups. Maximum parsimon...

    journal_title:American journal of botany

    pub_type: 杂志文章

    doi:10.3732/ajb.91.6.943

    authors: Scheen AC,Brochmann C,Brysting AK,Elven R,Morris A,Soltis DE,Soltis PS,Albert VA

    更新日期:2004-06-01 00:00:00

  • Ribosomal DNA phylogeny of the Bangiophycidae (Rhodophyta) and the origin of secondary plastids.

    abstract::We sequenced the nuclear small subunit ribosomal DNA coding region from 20 members of the Bangiophycidae and from two members of the Florideophycidae to gain insights into red algal evolution. A combined alignment of nuclear and plastid small subunit rDNA and a data set of Rubisco protein sequences were also studied t...

    journal_title:American journal of botany

    pub_type: 杂志文章

    doi:

    authors: Müller KM,Oliveira MC,Sheath RG,Bhattacharya D

    更新日期:2001-08-01 00:00:00

  • Identification and characterization of microsatellite loci in the rush Juncus effusus (Juncaceae).

    abstract:PREMISE OF THE STUDY:Microsatellite markers were developed for the common wetland plant Juncus effusus to assess levels of within- and among-population genetic diversity. METHODS AND RESULTS:Using a next-generation sequencing approach we identified new microsatellite loci, from which 23 were further characterized in a...

    journal_title:American journal of botany

    pub_type: 杂志文章

    doi:10.3732/ajb.1100322

    authors: Michalski SG,Durka W

    更新日期:2012-02-01 00:00:00

  • A new method to measure leaf age: Leaf measuring-interval index.

    abstract::We propose a new method, the leaf measuring-interval index (LMI), to estimate leaf age in morphological and physiological studies of leaves. When the plastochron, the interval between the initiation of successive leaves, is constant, the well-known leaf plastochron index (LPI) provides a robust measure of leaf age. Wh...

    journal_title:American journal of botany

    pub_type: 杂志文章

    doi:10.3732/ajb.0800303

    authors: Chen CC,Chen H,Chen YR

    更新日期:2009-07-01 00:00:00

  • Adaptation and divergence in edaphic specialists and generalists: serpentine soil endemics in the California flora occur in barer serpentine habitats with lower soil calcium levels than serpentine tolerators.

    abstract:PREMISE:Adaptation to harsh edaphic substrates has repeatedly led to the evolution of edaphic specialists and generalists. Yet, it is unclear what factors promote specialization versus generalization. Here, we search for habitat use patterns associated with serpentine endemics (specialists) and serpentine tolerators (g...

    journal_title:American journal of botany

    pub_type: 杂志文章

    doi:10.1002/ajb2.1285

    authors: Sianta SA,Kay KM

    更新日期:2019-05-01 00:00:00

  • Comparative anatomy, morphology, and molecular phylogenetics of the African genus Satanocrater (Acanthaceae).

    abstract:PREMISE OF THE STUDY:Anatomical and morphological features of Satanocrater were studied to test hypotheses of xeric adaptations in the genus, which is endemic to arid tropical Africa. These features, together with molecular data, were used to test the phylogenetic placement of Satanocrater within the large plant family...

    journal_title:American journal of botany

    pub_type: 杂志文章

    doi:10.3732/ajb.1100354

    authors: Tripp EA,Fatimah S

    更新日期:2012-06-01 00:00:00

  • Hybridization among dominant tree species correlates positively with understory plant diversity.

    abstract:PREMISE OF THE STUDY:Elucidating the factors that determine the abundance and distribution of species remains a central goal of ecology. It is well recognized that genetic differences among individual species can affect the distribution and species interactions of dependent taxa, but the ecological effects of genetic d...

    journal_title:American journal of botany

    pub_type: 杂志文章

    doi:10.3732/ajb.1100137

    authors: Adams RI,Goldberry S,Whitham TG,Zinkgraf MS,Dirzo R

    更新日期:2011-10-01 00:00:00

  • Patterns of variation in distylous traits and reproductive consequences in Erythroxylum species and populations.

    abstract:PREMISE:Distylous species possess two floral morphs with reciprocal positioning of stigmas and anthers that is hypothesized to promote disassortative pollination. Theoretical models predict equal morph frequencies, but many populations depart from the expected 1:1 ratio, a pattern that often correlates with asymmetric ...

    journal_title:American journal of botany

    pub_type: 杂志文章

    doi:10.1002/ajb2.1478

    authors: Matias R,Pérez-Barrales R,Consolaro H

    更新日期:2020-06-01 00:00:00

  • Molecular systematics of the Brassicaceae: evidence from coding plastidic matK and nuclear Chs sequences.

    abstract::Phylogenetic relationships were inferred using nucleotide sequence variation of the nuclear-encoded chalcone synthase gene (Chs) and the chloroplast gene matK for members of five tribes from the family Brassicaceae to analyze tribal and subtribal structures. Phylogenetic trees from individual data sets are mostly in c...

    journal_title:American journal of botany

    pub_type: 杂志文章

    doi:

    authors: Koch M,Haubold B,Mitchell-Olds T

    更新日期:2001-03-01 00:00:00

  • Development and characterization of microsatellite loci in Pericopsis elata (Fabaceae) using a cost-efficient approach.

    abstract:PREMISE OF THE STUDY:Microsatellite loci were developed in the endangered Pericopsis elata using a combination of low-cost procedures. METHODS AND RESULTS:Microsatellite isolation was performed simultaneously on three distinct species through a newly available procedure that associates multiplex microsatellite enrichm...

    journal_title:American journal of botany

    pub_type: 杂志文章

    doi:10.3732/ajb.1100070

    authors: Micheneau C,Dauby G,Bourland N,Doucet JL,Hardy OJ

    更新日期:2011-10-01 00:00:00

  • Estimating near-infrared leaf reflectance from leaf structural characteristics.

    abstract::The relationship between near-infrared reflectance at 800 nm (NIRR) from leaves and characteristics of leaf structure known to affect photosynthesis was investigated in 48 species of alpine angiosperms. This wavelength was selected to discriminate the effects of leaf structure vs. chemical or water content on leaf ref...

    journal_title:American journal of botany

    pub_type: 杂志文章

    doi:

    authors: Slaton MR,Raymond Hunt E Jr,Smith WK

    更新日期:2001-02-01 00:00:00

  • Cuscuta jepsonii (Convolvulaceae): An invasive weed or an extinct endemic?

    abstract::Despite their ecological significance, parasitic plants face more conservation challenges than do autotrophic plants. This is especially true for the groups that include weedy or invasive species such as Cuscuta. While approximately half of the Cuscuta (dodders) species may require conservation measures, the genus as ...

    journal_title:American journal of botany

    pub_type: 杂志文章

    doi:10.3732/ajb.0800425

    authors: Costea M,Stefanovic S

    更新日期:2009-09-01 00:00:00