DNA Methylation and Gene Regulation in Honeybees: From Genome-Wide Analyses to Obligatory Epialleles.

Abstract:

:In contrast to heavily methylated mammalian genomes, invertebrate genomes are only sparsely methylated in a 'mosaic' fashion with the majority of methylated CpG dinucleotides found across gene bodies. Importantly, this gene body methylation is frequently associated with active transcription, and studies in the honeybee have shown that there are strong links between gene body methylation and alternative splicing. Additional work also highlights that obligatory methylated epialleles influence transcriptional changes in a context-specific manner. Here we discuss the current knowledge in this emerging field and highlight both similarities and differences between DNA methylation systems in mammals and invertebrates. Finally, we argue that the relationship between genetic variation, differential DNA methylation, other epigenetic modifications and the transcriptome must be further explored to fully understand the role of DNA methylation in converting genomic sequences into phenotypes.

journal_name

Adv Exp Med Biol

authors

Wedd L,Maleszka R

doi

10.1007/978-3-319-43624-1_9

subject

Has Abstract

pub_date

2016-01-01 00:00:00

pages

193-211

eissn

0065-2598

issn

2214-8019

journal_volume

945

pub_type

杂志文章,评审
  • Ecto-nucleoside triphosphate pyrophosphohydrolase activity and calcium pyrophosphate dihydrate crystal deposition disease.

    abstract::Articular cartilage contains any ectoenzyme activity, NTP-PPH, which is capable of generating PPi from NTP substrates. The PPi generated is from the cleavage of the alpha-beta pyrophosphate bond of NTP and does not result from the effects of NTP catabolites. NTP-PPH activity is expressed on human skin fibroblasts in c...

    journal_title:Advances in experimental medicine and biology

    pub_type: 杂志文章

    doi:10.1007/978-1-4684-5104-7_23

    authors: Wortmann RL,Ryan LM,Karas B,McCarthy DJ

    更新日期:1986-01-01 00:00:00

  • Isolation of [hydroxyproline3]Lysyl-bradykinin formed by kallikrein from human plasma protein.

    abstract::[Hydroxyproline3]Lysyl-bradykinin ([Hyp3]Lys-BK), a new kinin was isolated, besides Lysyl-bradykinin (Lys-BK), from the reaction mixture of human plasma protein Cohn's fraction IV-4 with hog pancreatic kallikrein. The liberated kinins were isolated by procedures including ethanol extraction, Sephadex G-15, CM cellulos...

    journal_title:Advances in experimental medicine and biology

    pub_type: 杂志文章

    doi:10.1007/978-1-4615-9543-4_83

    authors: Sasaguri M,Ikeda M,Ideishi M,Arakawa K

    更新日期:1989-01-01 00:00:00

  • Advances in Penetrating Multichannel Microelectrodes Based on the Utah Array Platform.

    abstract::The Utah electrode array (UEA) and its many derivatives have become a gold standard for high-channel count bi-directional neural interfaces, in particular in human subject applications. The chapter provides a brief overview of leading electrode concepts and the context in which the UEA has to be understood. It goes on...

    journal_title:Advances in experimental medicine and biology

    pub_type: 杂志文章,评审

    doi:10.1007/978-981-13-2050-7_1

    authors: Leber M,Körner J,Reiche CF,Yin M,Bhandari R,Franklin R,Negi S,Solzbacher F

    更新日期:2019-01-01 00:00:00

  • Endosome acidification and the pathways of receptor-mediated endocytosis.

    abstract::Acidification of endocytic compartments occurs within 2-3 minutes following internalization. In CHO cells, three kinetically and morphologically distinct endocytic or recycling compartments can be identified. Measurements of the pH in these compartments show that the acidity of the compartments is regulated independen...

    journal_title:Advances in experimental medicine and biology

    pub_type: 杂志文章,评审

    doi:10.1007/978-1-4684-5442-0_16

    authors: Maxfield FR,Yamashiro DJ

    更新日期:1987-01-01 00:00:00

  • Comparison of Near-Infrared Oximeters in a Liquid Optical Phantom with Varying Intralipid and Blood Content.

    abstract::The interpretation of cerebral tissue oxygen saturation values (StO2) in clinical settings is currently complicated by the use of different near-infrared spectrophotometry (NIRS) devices producing different StO2 values for the same oxygenation due to differences in the algorithms and technical aspects. The aim was to ...

    journal_title:Advances in experimental medicine and biology

    pub_type: 杂志文章

    doi:10.1007/978-1-4939-3023-4_52

    authors: Kleiser S,Hyttel-Sorensen S,Greisen G,Wolf M

    更新日期:2016-01-01 00:00:00

  • Paucity of humoral response in patients to glioma-associated antigen(s): antigen localization by immunofluorescence.

    abstract::Xenogeneic immunization of freshly-prepared human glioma extracts into goats has yielded a polyclonal antiserum, which after multiple absorptions specifically identifies antigenic entities only in glioma extracts, and not in appropriate controls, both by radioimmunoassays (RIAs) and Western immunoblots. The results fr...

    journal_title:Advances in experimental medicine and biology

    pub_type: 杂志文章

    doi:10.1007/978-1-4684-6000-1_30

    authors: Fischer DK,Matsuda M,Shaban F,Narayan RK,Atassi MZ

    更新日期:1991-01-01 00:00:00

  • Effect of severe hypoxia on prefrontal cortex and muscle oxygenation responses at rest and during exhaustive exercise.

    abstract::Near infrared spectroscopy (NIRS) may provide valuable insight into the determinants of exercise performance. We examined the effects of severe hypoxia on cerebral (prefrontal lobe) and muscle (gastrocnemius) oxygenation at rest and during a fatiguing task. After a 15-min rest, 15 healthy subjects (age 25.3 +/- 0.9 yr...

    journal_title:Advances in experimental medicine and biology

    pub_type: 临床试验,杂志文章

    doi:10.1007/978-0-387-85998-9_49

    authors: Rupp T,Perrey S

    更新日期:2009-01-01 00:00:00

  • The Bone Microenvironment in Prostate Cancer Metastasis.

    abstract::The propensity of prostate cancer cells to seed the skeleton and then progress into clinically relevant metastatic tumors is widely recognized and a major cause of morbidity and mortality for patients. The natural history of prostate adenocarcinoma most frequently begins with a tumor diagnosed at a localized stage, wh...

    journal_title:Advances in experimental medicine and biology

    pub_type: 杂志文章,评审

    doi:10.1007/978-3-030-32656-2_9

    authors: DiNatale A,Fatatis A

    更新日期:2019-01-01 00:00:00

  • The inner blood-retinal barrier: molecular structure and transport biology.

    abstract::The inner blood-retinal barrier (inner BRB) is created by complex tight junctions of retinal capillary endothelial cells. Although this barrier prevents the free diffusion of substances between the circulating blood and the neural retina, the inner BRB efficiently supplies nutrients to the retina and removes endobioti...

    journal_title:Advances in experimental medicine and biology

    pub_type: 杂志文章,评审

    doi:

    authors: Hosoya K,Tachikawa M

    更新日期:2012-01-01 00:00:00

  • Multi-scale models of the lung airways and vascular system.

    abstract::Medical imaging now enables measurement of the lung in vivo at controlled volumes, prompting the development of increasingly sophisticated models of the geometry of the lung, from the largest airways and vessels to the alveolar tissue and capillary bed. We have developed methods for deriving subject-specific models of...

    journal_title:Advances in experimental medicine and biology

    pub_type: 杂志文章

    doi:10.1007/978-0-387-73693-8_33

    authors: Tawhai MH,Burrowes KS

    更新日期:2008-01-01 00:00:00

  • Reactivity of taurine with aldehydes and its physiological role.

    abstract::The chemical reactions of the amino group of taurine with aldehydes were investigated. Glucose, acetaldehyde, and malondialdehyde were used as aldehydes. After taurine had reacted, the amounts of remaining taurine and aldehydes were measured, and the reactivity was evaluated. Amino acids such as glycine, alpha-alanine...

    journal_title:Advances in experimental medicine and biology

    pub_type: 杂志文章

    doi:10.1007/978-1-4899-1471-2_8

    authors: Ogasawara M,Nakamura T,Koyama I,Nemoto M,Yoshida T

    更新日期:1994-01-01 00:00:00

  • Functional Site-Directed Fluorometry.

    abstract::Initially developed in the mid-1990s to examine the conformational changes of the canonical Shaker voltage-gated potassium channel, functional site-directed fluorometry has since been expanded to numerous other voltage-gated and ligand-gated ion channels as well as transporters, pumps, and other integral membrane prot...

    journal_title:Advances in experimental medicine and biology

    pub_type: 杂志文章,评审

    doi:10.1007/978-1-4939-2845-3_4

    authors: Priest M,Bezanilla F

    更新日期:2015-01-01 00:00:00

  • Ability of Three Lactic Acid Bacteria to Grow in Sessile Mode and to Inhibit Biofilm Formation of Pathogenic Bacteria.

    abstract::In this study, we explored the effect of three lactic acid bacteria (LAB), i.e. Enterococcus sp CM9, Enterococcus sp CM18 and Enterococcus faecium H3, and their supernatants, on seven biofilm-forming pathogenic strains isolated from human urinary tract or nose infections. By quantitative biofilm production assay, a st...

    journal_title:Advances in experimental medicine and biology

    pub_type: 杂志文章

    doi:10.1007/5584_2020_495

    authors: Benmouna Z,Dalache F,Zadi-Karam H,Karam NE,Vuotto C

    更新日期:2020-01-01 00:00:00

  • Definition, Derivation, and Diagnosis of Barrett's Esophagus: Pathological Perspectives.

    abstract::More than 60 years have elapsed since Barrett described the condition that continues to bear his name. Despite much research, clinical and basic, the defining features and the diagnosis of columnar-lined esophagus (CLO) are still embroiled with controversy and uncertainty. For pathologists, these controversies are not...

    journal_title:Advances in experimental medicine and biology

    pub_type: 杂志文章

    doi:10.1007/978-3-319-41388-4_7

    authors: Lowes H,Somarathna T,Shepherd NA

    更新日期:2016-01-01 00:00:00

  • Curcumin and Its Role in Chronic Diseases.

    abstract::Curcumin, a yellow pigment from the spice turmeric, is used in Indian and Chinese medicine since ancient times for wide range of diseases. Extensive scientific research on this molecule performed over the last 3 to 4 decades has proved its potential as an important pharmacological agent. The antioxidant, anti-inflamma...

    journal_title:Advances in experimental medicine and biology

    pub_type: 杂志文章,评审

    doi:10.1007/978-3-319-41334-1_1

    authors: Kunwar A,Priyadarsini KI

    更新日期:2016-01-01 00:00:00

  • The immunosuppresive tick salivary protein, Salp15.

    abstract::The interaction between Ixodid ticks and their mammalian hosts is a complex relationship. While the mammalian host tries to avoid the completion of the feeding process, the tick has devised strategies to counteract these attempts. Tick saliva contains a vast array of pharmacological activities that presumably aid the ...

    journal_title:Advances in experimental medicine and biology

    pub_type: 杂志文章,评审

    doi:10.1007/978-1-4419-1601-3_10

    authors: Juncadella IJ,Anguita J

    更新日期:2009-01-01 00:00:00

  • Exercise Training in Pulmonary Hypertension and Right Heart Failure: Insights from Pre-clinical Studies.

    abstract::Exercise training (ExT) is widely used for the prevention and treatment of several chronic cardiovascular diseases. However, only recently it started to be recognized as safe and beneficial in pulmonary arterial hypertension. Despite the consistency of its favorable effects on exercise tolerance and quality of life, t...

    journal_title:Advances in experimental medicine and biology

    pub_type: 杂志文章,评审

    doi:10.1007/978-981-10-4307-9_17

    authors: Moreira-Gonçalves D,Ferreira-Nogueira R,Santos M,Silva AF,Ferreira R,Leite-Moreira A,Duarte JA,Henriques-Coelho T

    更新日期:2017-01-01 00:00:00

  • Normative Retinal Thicknesses in Common Animal Models of Eye Disease Using Spectral Domain Optical Coherence Tomography.

    abstract::Purpose This study demonstrates a standardized approach to measuring retinal thickness (RT) using spectral domain optical coherence tomography (SD-OCT) in commonly used animal models of disease and reports a normative data set for future use. Materials and Methods Twenty normal eyes of 4 adult animal models (5 rats, 5...

    journal_title:Advances in experimental medicine and biology

    pub_type: 杂志文章

    doi:10.1007/978-3-319-75402-4_20

    authors: Carpenter CL,Kim AY,Kashani AH

    更新日期:2018-01-01 00:00:00

  • Cellular origin of mucins of the ocular surface tear film.

    abstract::In summary, we have demonstrated that the ocular surface epithelia express at least three mucin genes. We suggest that the gel-forming mucin MUC5AC is a major mucin forming the mucus gel of the tear film. We further suggest that MUC1 facilitates the spread of the MUC5-containing mucus on the ocular surface and, along ...

    journal_title:Advances in experimental medicine and biology

    pub_type: 杂志文章,评审

    doi:10.1007/978-1-4615-5359-5_32

    authors: Gipson IK,Inatomi T

    更新日期:1998-01-01 00:00:00

  • Induction of indoleamine 2,3-dioxygenase in human cells in vitro.

    abstract::IFN-gamma is the most effective principle responsible for IDO induction in human cells in vitro. Lymphocyte factors support the effect of other IFN species. Induction of IDO and influence of various factors on IDO is correlated to pteridine synthesis. Cooperative effects of several mediators may account for in vivo ob...

    journal_title:Advances in experimental medicine and biology

    pub_type: 杂志文章

    doi:10.1007/978-1-4684-5952-4_55

    authors: Werner-Felmayer G,Werner ER,Fuchs D,Hausen A,Reibnegger G,Wachter H

    更新日期:1991-01-01 00:00:00

  • Cholinergic sensitivity of the developing bullfrog (Rana catesbeiana) does not explain vulnerability to chronic nicotine exposure.

    abstract::Juvenile bullfrogs previously identified as highly sensitive to acute nicotine, demonstrated normal neuroventilation following 3 wk of chronic nicotine exposure. Acute bath application of 1 microM galantamine, an acetylcholinesterase inhibitor, significantly attenuated both bullfrog normocapnic neuroventilation and re...

    journal_title:Advances in experimental medicine and biology

    pub_type: 杂志文章

    doi:10.1007/978-1-4419-5692-7_21

    authors: Brundage CM,Nelson CA,Taylor BE

    更新日期:2010-01-01 00:00:00

  • A genomic model for differential hypoxic ventilatory responses.

    abstract::Inbred mice are routinely used as genetic models in lung biology. Among many phenotypic differences in lung function and structure, C3H/HeJ (C3) and C57BL/6J (B6) inbred mice also demonstrate a significantly different ventilatory pattern during acute hypoxic challenge. The present study rejects the hypothesis that a g...

    journal_title:Advances in experimental medicine and biology

    pub_type: 杂志文章

    doi:10.1007/0-306-46825-5_8

    authors: Tankersley CG

    更新日期:2000-01-01 00:00:00

  • Effects of myocardial ischemia on cardiac contractility and ion transport in working and Langendorff rabbit heart.

    abstract::In order to define the ischemic myocardial injury in terms of the possible alteration of cardiac membrane properties, Rb+ uptake and 3H-ouabain binding to cardiac tissue were compared in normal and ischemic rabbit hearts. In isolated Langendorff or working rabbit hearts, a global ischemia was produced by reducing the ...

    journal_title:Advances in experimental medicine and biology

    pub_type: 杂志文章

    doi:10.1007/978-1-4684-4895-5_45

    authors: Rhee H,Tyler L

    更新日期:1984-01-01 00:00:00

  • Thermomechanical analysis of frozen aqueous systems.

    abstract::Thermomechanical Analysis (TMA), using the parallel-plate-rheometer mode of the DuPont 943 TMA, was used to evaluate the softening properties of frozen aqueous carbohydrate model systems. A sample (of fixed dimension) of frozen solution was placed between the parallel plates and cooled to -80 degrees C. The sample was...

    journal_title:Advances in experimental medicine and biology

    pub_type: 杂志文章

    doi:10.1007/978-1-4899-0664-9_11

    authors: Maurice TJ,Asher YJ,Thomson S

    更新日期:1991-01-01 00:00:00

  • 4-1BB as a therapeutic target for human disease.

    abstract::4-1BB (CD137) is being thought of as an attractive target for immunotherapy of many human immune diseases based on encouraging results with 4-1BB agonistic antibody treatment in mouse models of cancer, autoimmune disease, asthma and additionally as a means to improve vaccination. In this review, we will summarize the ...

    journal_title:Advances in experimental medicine and biology

    pub_type: 杂志文章,评审

    doi:10.1007/978-0-387-89520-8_8

    authors: Lee SW,Croft M

    更新日期:2009-01-01 00:00:00

  • fMRI for monitoring dynamic changes in tissue oxygenation/blood flow: potential applications for tumor response to carbogen treatment.

    abstract::The ability to differentiate between well-oxygenated and poorly-oxygenated tumors may play an important role in selecting an optimal therapeutic regime for tumor treatment of the individual patient. We present preliminary results in the development of a dynamic functional MRI method for mapping tissue oxygenation and ...

    journal_title:Advances in experimental medicine and biology

    pub_type: 杂志文章

    doi:10.1007/978-1-4615-0075-9_42

    authors: Zhong J,Kwok WC,Okunieff P

    更新日期:2003-01-01 00:00:00

  • Pattern recognition of surface EMG biological signals by means of Hilbert spectrum and fuzzy clustering.

    abstract::A novel method for hand movement pattern recognition from electromyography (EMG) biological signals is proposed. These signals are recorded by a three-channel data acquisition system using surface electrodes placed over the forearm, and then processed to recognize five hand movements: opening, closing, supination, fle...

    journal_title:Advances in experimental medicine and biology

    pub_type: 杂志文章

    doi:10.1007/978-1-4419-7046-6_20

    authors: Pinzon-Morales RD,Baquero-Duarte KA,Orozco-Gutierrez AA,Grisales-Palacio VH

    更新日期:2011-01-01 00:00:00

  • Investigating the Role of Mitochondria in Type 2 Diabetes - Lessons from Lipidomics and Proteomics Studies of Skeletal Muscle and Liver.

    abstract::Mitochondrial dysfunction is discussed as a key player in the pathogenesis of type 2 diabetes mellitus (T2Dm), a highly prevalent disease rapidly developing as one of the greatest global health challenges of this century. Data however about the involvement of mitochondria, central hubs in bioenergetic processes, in th...

    journal_title:Advances in experimental medicine and biology

    pub_type: 杂志文章

    doi:10.1007/978-981-13-8367-0_9

    authors: Kappler L,Kollipara L,Lehmann R,Sickmann A

    更新日期:2019-01-01 00:00:00

  • A novel regulatory mechanism for a novel phase-variable outer membrane protein of Escherichia coli.

    abstract::Antigen 43 (Ag43) is a prominent hetero-oligomeric protein complex in the outer membrane of Escherichia coli. It is composed of two subunits. alpha 43 (M(r) 60, 000) and beta 43 (M(r) 53, 000) in 1:1 stoichiometry. alpha 43 is surface expressed, extends beyond the O-side chains of smooth lipopolysaccharide and is boun...

    journal_title:Advances in experimental medicine and biology

    pub_type: 杂志文章

    doi:10.1007/978-1-4899-1828-4_56

    authors: Henderson IR,Meehan M,Owen P

    更新日期:1997-01-01 00:00:00

  • Tropomyosins in skeletal muscle diseases.

    abstract::A number of congenital muscle diseases and disorders are caused by mutations in genes that encode the proteins present in or associated with the thin filaments of the muscle sarcomere. These genes include alpha-skeletal actin (ACTA1), beta-tropomyosin (TPM2), alpha-tropomyosin slow (TPM3), nebulin (NEB), troponin I fa...

    journal_title:Advances in experimental medicine and biology

    pub_type: 杂志文章,评审

    doi:10.1007/978-0-387-85766-4_12

    authors: Kee AJ,Hardeman EC

    更新日期:2008-01-01 00:00:00