iTRAQ-based quantitative proteomic analysis reveals multiple effects of Emodin to Haemophilus parasuis.

Abstract:

:Haemophilus parasuis, a symbiotic bacteria of upper respiratory tract of swine, is the etiological agent of Glässer's disease, which is characterized by fibrinous polyserositis. Emodin, exhibits antibacterial activity against H. parasuis, yet the action mode has not been fully understood. In present study, isobaric tag for relative and absolute quantification (iTRAQ) method was applied to analyze the global protein alteration of H. parasuis in response to 16μg/mL Emodin. In total, 338 proteins exhibiting significant differential expressions were identified. It was speculated that, through application of bioinformatics analysis to theses differentially expressed proteins, Emodin mainly inhibited some key proteins expression of ABC transport system, carbohydrate metabolism pathway and bacterial cell division by inhibiting the ribosome synthesis, resulting in the growth inhibition of H. parasuis. Remarkably, nine virulence-associated proteins were detected differently expressed, further experiments revealed that after treatment with Emodin, H. parasuis could be inhibited to adhere to and invade into porcine kidney epithelial cells (PK-15 line) and exhibited increased sensitivity to serum complement in a concentration-dependent manner. Phagocytosis assay showed Emodin also could enhance phagocytic activity of porcine alveolar macrophages PAM to H. parasuis. These results indicated that Emodin also can attenuate virulence of H. parasuis and reduce infection. BIOLOGICAL SIGNIFICANCE:The Glässer's disease caused by H. parasuis has become a typical bacterial disease and cause serious economic loss to the swine industry around the world. Antibiotics are extensively used to control the infection, but increasing antibiotic resistance has been a severe problem. Hence, novel treatment agents are needed. So far, few antibacterial agents were reported that could control H. parasuis infection. In the present study, the state-of-the-art quantitative proteomic technology was applied to uncover underlying action mechanism of Emodin. This study extends understanding of antibacterial effect of Emodin to H. parasuis at molecular level and provides useful information for further investigations. Moreover, our results provide theoretical foundation for the practical application of Emodin.

journal_name

J Proteomics

journal_title

Journal of proteomics

authors

Li L,Tian Y,Yu J,Song X,Jia R,Cui Q,Tong W,Zou Y,Li L,Yin L,Liang X,He C,Yue G,Ye G,Zhao L,Shi F,Lv C,Cao S,Yin Z

doi

10.1016/j.jprot.2017.06.020

subject

Has Abstract

pub_date

2017-08-23 00:00:00

pages

39-47

eissn

1874-3919

issn

1876-7737

pii

S1874-3919(17)30230-0

journal_volume

166

pub_type

杂志文章
  • Proteomics identifies molecular networks affected by tetradecylthioacetic acid and fish oil supplemented diets.

    abstract:UNLABELLED:Fish oil (FO) and tetradecylthioacetic acid (TTA) - a synthetic modified fatty acid have beneficial effects in regulating lipid metabolism. In order to dissect the mechanisms underlying the molecular action of those two fatty acids we have investigated the changes in mitochondrial protein expression in a lon...

    journal_title:Journal of proteomics

    pub_type: 杂志文章

    doi:10.1016/j.jprot.2013.03.027

    authors: Wrzesinski K,R León I,Kulej K,Sprenger RR,Bjørndal B,Christensen BJ,Berge RK,Jensen ON,Rogowska-Wrzesinska A

    更新日期:2013-06-12 00:00:00

  • Exosomes derived from calcium oxalate-exposed macrophages enhance IL-8 production from renal cells, neutrophil migration and crystal invasion through extracellular matrix.

    abstract::Deposition of calcium oxalate (CaOx) crystals in renal interstitium is one of the key factors that cause progressive inflammation in kidney stone disease. Macrophages are responsible for elimination of these crystals but their roles to worsen inflammatory process remain under-investigated. This study thus aimed to def...

    journal_title:Journal of proteomics

    pub_type: 杂志文章

    doi:10.1016/j.jprot.2018.06.015

    authors: Singhto N,Thongboonkerd V

    更新日期:2018-08-15 00:00:00

  • Transcriptomics and proteomics-based analysis of heterosis on main economic traits of silkworm, Bombyx mori.

    abstract::The application of silkworm hybrids have promoted the innovation and development of agricultural technology, but the mechanism of heterosis in silkworm has not been explained clearly. In this study, the heterosis of silkworm in the aspects of body weight, silk gland and cocoon weight was investigated by means of silkw...

    journal_title:Journal of proteomics

    pub_type: 杂志文章

    doi:10.1016/j.jprot.2020.103941

    authors: Xiao R,Yuan Y,Zhu F,He S,Ge Q,Wang X,Taha R,Chen K

    更新日期:2020-10-30 00:00:00

  • Bottom up proteomics reveals novel differentiation proteins in neuroblastoma cells treated with 13-cis retinoic acid.

    abstract::Neuroblastoma, a cancer of the sympathetic nervous system, is the second most common pediatric cancer. A unique feature of neuroblastoma is remission in some patients due to spontaneous differentiation of metastatic tumors. 13-cis retinoic acid (13-cis RA) is currently used in the clinic to treat neuroblastoma due to ...

    journal_title:Journal of proteomics

    pub_type: 杂志文章

    doi:10.1016/j.jprot.2019.103491

    authors: Halakos EG,Connell AJ,Glazewski L,Wei S,Mason RW

    更新日期:2019-10-30 00:00:00

  • The mammary gland in domestic ruminants: a systems biology perspective.

    abstract:UNLABELLED:Milk and dairy products are central elements in the human diet. It is estimated that 108kg of milk per year are consumed per person worldwide. Therefore, dairy production represents a relevant fraction of the economies of many countries, being cattle, sheep, goat, water buffalo, and other ruminants the main ...

    journal_title:Journal of proteomics

    pub_type: 杂志文章

    doi:10.1016/j.jprot.2013.09.012

    authors: Ferreira AM,Bislev SL,Bendixen E,Almeida AM

    更新日期:2013-12-06 00:00:00

  • Revealing the functional structure of a new PLA2 K49 from Bothriopsis taeniata snake venom employing automatic "de novo" sequencing using CID/HCD/ETD MS/MS analyses.

    abstract::Snake venoms are composed of approximately 90% of proteins with several pharmacological activities having high potential in research as biological tools. One of the most abundant compounds is phospholipases A2 (PLA2), which are the most studied venom protein due to their wide pharmacological activity. Using a combinat...

    journal_title:Journal of proteomics

    pub_type: 杂志文章

    doi:10.1016/j.jprot.2015.10.020

    authors: Carregari VC,Dai J,Verano-Braga T,Rocha T,Ponce-Soto LA,Marangoni S,Roepstorff P

    更新日期:2016-01-10 00:00:00

  • A phosphoproteomic study reveals shp-1 cleavage reprograms LPS signaling via a PI-3K/NF-κB and mTORC1 related mechanism.

    abstract::The reprogrammed lipopolysaccharide (LPS) pathway has been reported to render patients more susceptible to the development of post-traumatic multiple organ dysfunction syndrome (MODS). To facilitate thorough understanding of this mechanism, a phosphoproteomic study was utilized to screen the potential signaling molecu...

    journal_title:Journal of proteomics

    pub_type: 杂志文章

    doi:10.1016/j.jprot.2015.07.003

    authors: Xu E,Chen J,Wang Y,Ke Z,Luo S,Zou Z

    更新日期:2015-10-14 00:00:00

  • A proteomic approach to compare saliva from individuals with and without oral leukoplakia.

    abstract:BACKGROUND:Oral leukoplakia is the most common potentially malignant disorder in the oral cavity and can precede carcinoma. This study aimed to identify possible oral leukoplakia salivary biomarkers. METHODS:Unstimulated saliva was collected from participants and protein concentration was determined. Proteins were the...

    journal_title:Journal of proteomics

    pub_type: 杂志文章

    doi:10.1016/j.jprot.2016.07.029

    authors: Camisasca DR,da Rós Gonçalves L,Soares MR,Sandim V,Nogueira FC,Garcia CH,Santana R,de Oliveira SP,Buexm LA,de Faria PA,Dias FL,Pereira DA,Zingali RB,Alves G,Lourenço SQ

    更新日期:2017-01-16 00:00:00

  • Protein nitrotryptophan: formation, significance and identification.

    abstract::Reactive nitrogen species are formed during a variety of disease states and have been shown to modify several amino acids on proteins. To date, the majority of research in this area has focused on the nitration of tyrosine residues to form 3-nitrotyrosine. However, emerging evidence suggests that another modification,...

    journal_title:Journal of proteomics

    pub_type: 杂志文章,评审

    doi:10.1016/j.jprot.2011.05.032

    authors: Nuriel T,Hansler A,Gross SS

    更新日期:2011-10-19 00:00:00

  • Identification of thioredoxin target disulfides in proteins released from barley aleurone layers.

    abstract::Thioredoxins are ubiquitous disulfide reductases involved in a wide range of cellular processes including DNA synthesis, oxidative stress response and apoptosis. In cereal seeds thioredoxins are proposed to facilitate the germination process by reducing disulfide bonds in storage proteins and other targets in the star...

    journal_title:Journal of proteomics

    pub_type: 杂志文章

    doi:10.1016/j.jprot.2010.01.007

    authors: Hägglund P,Bunkenborg J,Yang F,Harder LM,Finnie C,Svensson B

    更新日期:2010-04-18 00:00:00

  • Proteomics fingerprints of systemic mechanisms of adaptation to bile in Lactobacillus fermentum.

    abstract::Lactobacillus fermentum is a natural resident of the human GIT and is used as a probiotic. A unique property of L. fermentum is its ability to tolerate, colonize, and survive in the harsh conditions of bile, which facilitates transient colonization of the host colon. In the current study, we investigated the key mecha...

    journal_title:Journal of proteomics

    pub_type: 杂志文章

    doi:10.1016/j.jprot.2019.103600

    authors: Ali SA,Singh P,Tomar SK,Mohanty AK,Behare P

    更新日期:2020-02-20 00:00:00

  • Proteomics discovery of biomarkers for mitral regurgitation caused by mitral valve prolapse.

    abstract:UNLABELLED:Mitral regurgitation (MR) is a common valvular lesion frequently caused by mitral valve prolapse (MVP). Surgical intervention in MVP patients with significant MR is predicated on symptoms and measures of left ventricular dysfunction. Because these indicators may be subjective or imprecise, serological biomar...

    journal_title:Journal of proteomics

    pub_type: 临床试验,杂志文章

    doi:10.1016/j.jprot.2013.10.009

    authors: Tan HT,Ling LH,Dolor-Torres MC,Yip JW,Richards AM,Chung MC

    更新日期:2013-12-06 00:00:00

  • A Fusarium graminearum strain-comparative proteomic approach identifies regulatory changes triggered by agmatine.

    abstract:UNLABELLED:Plant pathogens face different environmental clues depending on the stage of the infection cycle they are in. Fusarium graminearum infects small grain cereals producing trichothecenes type B (TB) that act as virulence factor in the interaction with the plant and have important food safety implications. This ...

    journal_title:Journal of proteomics

    pub_type: 杂志文章

    doi:10.1016/j.jprot.2015.11.010

    authors: Pasquali M,Serchi T,Cocco E,Leclercq CC,Planchon S,Guignard C,Renaut J,Hoffmann L

    更新日期:2016-03-30 00:00:00

  • Metabolome and proteome changes in skeletal muscle and blood of pre-weaning calves fed leucine and threonine supplemented diets.

    abstract::In pre-weaning calves, both leucine and threonine play important roles in growth and muscle metabolism. In this study, metabolomics, proteomics and clinical chemistry were used to assess the effects of leucine and threonine supplementation added to milk replacer on 14 newborn Holstein male calves: 7 were fed a control...

    journal_title:Journal of proteomics

    pub_type: 杂志文章

    doi:10.1016/j.jprot.2020.103677

    authors: Yu K,Matzapetakis M,Horvatić A,Terré M,Bach A,Kuleš J,Yeste N,Gómez N,Arroyo L,Rodríguez-Tomàs E,Peña R,Guillemin N,de Almeida AM,Eckersall PD,Bassols A

    更新日期:2020-03-30 00:00:00

  • Comparative analysis of statistical methods used for detecting differential expression in label-free mass spectrometry proteomics.

    abstract:UNLABELLED:Label-free LC-MS/MS proteomics has proven itself to be a powerful method for evaluating protein identification and quantification from complex samples. For comparative proteomics, several methods have been used to detect the differential expression of proteins from such data. We have assessed seven methods u...

    journal_title:Journal of proteomics

    pub_type: 杂志文章

    doi:10.1016/j.jprot.2015.07.012

    authors: Langley SR,Mayr M

    更新日期:2015-11-03 00:00:00

  • Intrinsic disorder and multiple phosphorylations constrain the evolution of the flightin N-terminal region.

    abstract::Flightin is a myosin binding phosphoprotein that originated in the ancestor to Pancrustacea ~500 MYA. In Drosophila melanogaster, flightin is essential for length determination and flexural rigidity of thick filaments. Here, we show that among 12 Drosophila species, the N-terminal region is characterized by low sequen...

    journal_title:Journal of proteomics

    pub_type: 杂志文章

    doi:10.1016/j.jprot.2015.12.006

    authors: Lemas D,Lekkas P,Ballif BA,Vigoreaux JO

    更新日期:2016-03-01 00:00:00

  • Proteolytic events are relevant cellular responses during nervous system regeneration of the starfish Marthasterias glacialis.

    abstract:UNLABELLED:The molecular pathways that trigger the amazing intrinsic regenerative ability of echinoderm nervous system are still unknown. In order to approach this subject, a 2D-DIGE proteomic strategy was used, to screen proteome changes during neuronal regeneration in vivo, using starfish (Asteroidea, Echinodermata) ...

    journal_title:Journal of proteomics

    pub_type: 杂志文章

    doi:10.1016/j.jprot.2013.12.012

    authors: Ferraz Franco C,Santos R,Varela Coelho A

    更新日期:2014-03-17 00:00:00

  • Microbial symbionts affect Pisum sativum proteome and metabolome under Didymella pinodes infection.

    abstract:UNLABELLED:The long cultivation of field pea led to an enormous diversity which, however, seems to hold just little resistance against the ascochyta blight disease complex. The potential of below ground microbial symbiosis to prime the immune system of Pisum for an upcoming pathogen attack has hitherto received little ...

    journal_title:Journal of proteomics

    pub_type: 杂志文章

    doi:10.1016/j.jprot.2016.03.018

    authors: Desalegn G,Turetschek R,Kaul HP,Wienkoop S

    更新日期:2016-06-30 00:00:00

  • Label-free quantitative proteomics trends for protein-protein interactions.

    abstract::Understanding protein interactions within the complexity of a living cell is challenging, but techniques coupling affinity purification and mass spectrometry have enabled important progress to be made in the past 15 years. As identification of protein-protein interactions is becoming easier, the quantification of the ...

    journal_title:Journal of proteomics

    pub_type: 杂志文章,评审

    doi:10.1016/j.jprot.2012.10.027

    authors: Tate S,Larsen B,Bonner R,Gingras AC

    更新日期:2013-04-09 00:00:00

  • Surface N-glycoproteome patterns reveal key proteins of neuronal differentiation.

    abstract:UNLABELLED:Pluripotent stem cell-derived committed neural precursors are an important source of cells to treat neurodegenerative diseases including spinal cord injury. There remains an urgency to identify markers for monitoring of neural progenitor specificity, estimation of neural fate and follow-up correlation with t...

    journal_title:Journal of proteomics

    pub_type: 杂志文章

    doi:10.1016/j.jprot.2015.11.008

    authors: Tyleckova J,Valekova I,Zizkova M,Rakocyova M,Marsala S,Marsala M,Gadher SJ,Kovarova H

    更新日期:2016-01-30 00:00:00

  • Embryonic atrazine exposure elicits proteomic, behavioral, and brain abnormalities with developmental time specific gene expression signatures.

    abstract::Atrazine (ATZ), the second most commonly used herbicide in the United States, is an endocrine disrupting chemical linked to cancer and a common drinking water contaminant. This study further investigates ATZ-related developmental toxicity by testing the following hypotheses in zebrafish: the effects of embryonic ATZ e...

    journal_title:Journal of proteomics

    pub_type: 杂志文章

    doi:10.1016/j.jprot.2018.07.006

    authors: Horzmann KA,Reidenbach LS,Thanki DH,Winchester AE,Qualizza BA,Ryan GA,Egan KE,Hedrick VE,Sobreira TJP,Peterson SM,Weber GJ,Wirbisky-Hershberger SE,Sepúlveda MS,Freeman JL

    更新日期:2018-08-30 00:00:00

  • Mass spectrometry imaging for drug distribution studies.

    abstract::Since its introduction mass spectrometry imaging (MSI) has proven to be a powerful tool for the localization of molecules in biological tissues. In drug discovery and development, understanding the distribution of both drug and its metabolites is of critical importance. Traditional methods suffer from a lack of spatia...

    journal_title:Journal of proteomics

    pub_type: 杂志文章,评审

    doi:10.1016/j.jprot.2012.07.028

    authors: Prideaux B,Stoeckli M

    更新日期:2012-08-30 00:00:00

  • Venomics and antivenomics of Bothrops erythromelas from five geographic populations within the Caatinga ecoregion of northeastern Brazil.

    abstract::The Caatinga lancehead, Bothrops erythromelas, is a medically relevant species, responsible for most of the snakebite accidents in most parts of its distribution range in northeastern Brazil. The spectrum and geographic variability of its venom toxins were investigated applying a venomics approach to venom pools from ...

    journal_title:Journal of proteomics

    pub_type: 杂志文章

    doi:10.1016/j.jprot.2014.11.011

    authors: Jorge RJ,Monteiro HS,Gonçalves-Machado L,Guarnieri MC,Ximenes RM,Borges-Nojosa DM,Luna KP,Zingali RB,Corrêa-Netto C,Gutiérrez JM,Sanz L,Calvete JJ,Pla D

    更新日期:2015-01-30 00:00:00

  • Integrated physiological and chloroplast proteome analysis of wheat seedling leaves under salt and osmotic stresses.

    abstract::In this study, we performed an integrated physiological and chloroplast proteome analysis of wheat seedling leaves under salt and osmotic stresses by label-free based quantitative proteomic approach. Both salt and osmotic stresses significantly increased the levels of abscisic acid and methyl jasmonate and led to dama...

    journal_title:Journal of proteomics

    pub_type: 杂志文章

    doi:10.1016/j.jprot.2020.104097

    authors: Zhu D,Luo F,Zou R,Liu J,Yan Y

    更新日期:2021-03-15 00:00:00

  • A comparative study of the Se/S substitution in methionine and cysteine in Se-enriched yeast using an inductively coupled plasma mass spectrometry (ICP MS)-assisted proteomics approach.

    abstract:UNLABELLED:A proteomics approach based on 2D gel electrophoresis followed by HPLC-electrospray Orbitrap MS/MS was developed to investigate the replacement and the degree of the Se/S substitution in methionine and cysteine in Se-rich yeast. Capillary HPLC-inductively coupled plasma mass spectrometry (ICP-MS), employed i...

    journal_title:Journal of proteomics

    pub_type: 杂志文章

    doi:10.1016/j.jprot.2013.05.010

    authors: Bierla K,Bianga J,Ouerdane L,Szpunar J,Yiannikouris A,Lobinski R

    更新日期:2013-07-11 00:00:00

  • Targeted mass spectrometry for Serum Amyloid A (SAA) isoform profiling in sequential blood samples from experimentally Staphylococcus aureus infected pigs.

    abstract::Serum amyloid A (SAA) is a well-described acute phase protein induced during the acute phase response (APR) to infection. Four isoform specific genes are found in most mammals. Depending on species, SAA3 and SAA4 are generally preferentially expressed extrahepatically whereas SAA1 and SAA2 are hepatic isoforms dominat...

    journal_title:Journal of proteomics

    pub_type: 杂志文章

    doi:10.1016/j.jprot.2020.103904

    authors: Leuchsenring AB,Karlsson C,Bundgaard L,Malmström J,Heegaard PMH

    更新日期:2020-09-15 00:00:00

  • Pipeline to assess the greatest source of technical variance in quantitative proteomics using metabolic labelling.

    abstract::The biological variance in protein expression of interest to biologists can only be accessed if the technical variance of the protein quantification method is low compared with the biological variance. Technical variance is dependent on the protocol employed within a quantitative proteomics experiment and accumulated ...

    journal_title:Journal of proteomics

    pub_type: 杂志文章

    doi:10.1016/j.jprot.2012.09.020

    authors: Russell MR,Lilley KS

    更新日期:2012-12-21 00:00:00

  • Proteomics of wine additives: mining for the invisible via combinatorial peptide ligand libraries.

    abstract::Combinatorial peptide ligand libraries (CPLLs) have been adopted for harvesting and identifying traces of casein (used as a fining agent) present in white wines. Although minute amounts (200 microL) of CPLL beads are added to the entire content of a wine bottle (750 mL), they are able to sequester with high efficiency...

    journal_title:Journal of proteomics

    pub_type: 杂志文章

    doi:10.1016/j.jprot.2010.05.010

    authors: Cereda A,Kravchuk AV,D'Amato A,Bachi A,Righetti PG

    更新日期:2010-08-05 00:00:00

  • Identification of nephropathy predictors in urine from children with a recent diagnosis of type 1 diabetes.

    abstract::Despite research progresses, the chance to accurately predict the risk for diabetic nephropathy (DN) is still poor. So far, the first evidence of DN is micro-albuminuria, which is detected only 10-20 years after the onset of diabetes. Our goal is to develop new predictive tools of nephropathy starting from urine, whic...

    journal_title:Journal of proteomics

    pub_type: 临床试验,杂志文章

    doi:10.1016/j.jprot.2018.10.010

    authors: Magagnotti C,Zerbini G,Fermo I,Carletti RM,Bonfanti R,Vallone F,Andolfo A

    更新日期:2019-02-20 00:00:00

  • Proteomic identification of putative biomarkers for early detection of sudden cardiac death in a family with a LMNA gene mutation causing dilated cardiomyopathy.

    abstract:UNLABELLED:Dilated cardiomyopathy (DCM) is a severe heart disease characterized by progressive ventricular dilation and impaired systolic function of the left ventricle. We recently identified a novel pathogenic mutation in the LMNA gene in a family affected by DCM showing sudden death background. We now aimed to ident...

    journal_title:Journal of proteomics

    pub_type: 杂志文章

    doi:10.1016/j.jprot.2016.07.020

    authors: Izquierdo I,Rosa I,Bravo SB,Guitián E,Pérez-Serra A,Campuzano O,Brugada R,Mangas A,García Á,Toro R

    更新日期:2016-10-04 00:00:00