Deletion Variants of Middle East Respiratory Syndrome Coronavirus from Humans, Jordan, 2015.

Abstract:

:We characterized Middle East respiratory syndrome coronaviruses from a hospital outbreak in Jordan in 2015. The viruses from Jordan were highly similar to isolates from Riyadh, Saudi Arabia, except for deletions in open reading frames 4a and 3. Transmissibility and pathogenicity of this strain remains to be determined.

journal_name

Emerg Infect Dis

authors

Lamers MM,Raj VS,Shafei M,Ali SS,Abdallh SM,Gazo M,Nofal S,Lu X,Erdman DD,Koopmans MP,Abdallat M,Haddadin A,Haagmans BL

doi

10.3201/eid2204.152065

subject

Has Abstract

pub_date

2016-04-01 00:00:00

pages

716-9

issue

4

eissn

1080-6040

issn

1080-6059

journal_volume

22

pub_type

杂志文章
  • Severe Dengue Epidemic, Sri Lanka, 2017.

    abstract::In 2017, a dengue epidemic of unexpected magnitude occurred in Sri Lanka. A total of 186,101 suspected cases and 440 dengue-related deaths occurred. We conducted a comprehensive analysis of this epidemic by comparing national surveillance data for 2017 with data from the preceding 5 years. In all Sri Lanka districts, ...

    journal_title:Emerging infectious diseases

    pub_type: 杂志文章

    doi:10.3201/eid2604.190435

    authors: Tissera HA,Jayamanne BDW,Raut R,Janaki SMD,Tozan Y,Samaraweera PC,Liyanage P,Ghouse A,Rodrigo C,de Silva AM,Fernando SD

    更新日期:2020-04-01 00:00:00

  • Metagenomics of Imported Multidrug-Resistant Mycobacterium leprae, Saudi Arabia, 2017.

    abstract::Using shotgun metagenomics, we identified an imported case of multidrug-resistant Mycobacterium leprae in a Filipino resident of Saudi Arabia in 2017. We determined the phylogenomic lineage (3K1) and identified mutations in rpoB and rrs corresponding to the multidrug-resistance phenotype clinically observed. Metagenom...

    journal_title:Emerging infectious diseases

    pub_type: 杂志文章

    doi:10.3201/eid2603.190661

    authors: Guan Q,Almutairi TS,Alhalouli T,Pain A,Alasmari F

    更新日期:2020-03-01 00:00:00

  • Avian influenza vaccination of poultry and passive case reporting, Egypt.

    abstract::We investigated the influence of a mass poultry vaccination campaign on passive surveillance of highly pathogenic avian influenza subtype (H5N1) outbreaks among poultry in Egypt. Passive reporting dropped during the campaign, although probability of infection remained unchanged. Future poultry vaccination campaigns sh...

    journal_title:Emerging infectious diseases

    pub_type: 杂志文章

    doi:10.3201/eid1812.120616

    authors: Vergne T,Grosbois V,Jobre Y,Saad A,El Nabi AA,Galal S,Kalifa M,El Kader SA,Dauphin G,Roger F,Lubroth J,Peyre M

    更新日期:2012-12-01 00:00:00

  • Cotton rats and house sparrows as hosts for North and South American strains of eastern equine encephalitis virus.

    abstract::Eastern equine encephalitis virus (EEEV; family Togaviridae, genus Alphavirus) is an arbovirus that causes severe disease in humans in North America and in equids throughout the Americas. The enzootic transmission cycle of EEEV in North America involves passerine birds and the ornithophilic mosquito vector, Culiseta m...

    journal_title:Emerging infectious diseases

    pub_type: 杂志文章

    doi:10.3201/eid1609.100459

    authors: Arrigo NC,Adams AP,Watts DM,Newman PC,Weaver SC

    更新日期:2010-09-01 00:00:00

  • Highly Pathogenic Avian Influenza A(H5N8) Virus, Cameroon, 2017.

    abstract::Highly pathogenic avian influenza A(H5N8) viruses of clade 2.3.4.4 spread into West Africa in late 2016 during the autumn bird migration. Genetic characterization of the complete genome of these viruses detected in wild and domestic birds in Cameroon in January 2017 demonstrated the occurrence of multiple virus introd...

    journal_title:Emerging infectious diseases

    pub_type: 历史文章,杂志文章

    doi:10.3201/eid2407.172120

    authors: Wade A,Jumbo SD,Zecchin B,Fusaro A,Taiga T,Bianco A,Rodrigue PN,Salomoni A,Kameni JMF,Zamperin G,Nenkam R,Foupouapouognigni Y,Abdoulkadiri S,Aboubakar Y,Wiersma L,Cattoli G,Monne I

    更新日期:2018-07-01 00:00:00

  • Preliminary Epidemiology of Human Infections with Highly Pathogenic Avian Influenza A(H7N9) Virus, China, 2017.

    abstract::We compared the characteristics of cases of highly pathogenic avian influenza (HPAI) and low pathogenic avian influenza (LPAI) A(H7N9) virus infections in China. HPAI A(H7N9) case-patients were more likely to have had exposure to sick and dead poultry in rural areas and were hospitalized earlier than were LPAI A(H7N9)...

    journal_title:Emerging infectious diseases

    pub_type: 杂志文章

    doi:10.3201/eid2308.170640

    authors: Zhou L,Tan Y,Kang M,Liu F,Ren R,Wang Y,Chen T,Yang Y,Li C,Wu J,Zhang H,Li D,Greene CM,Zhou S,Iuliano AD,Havers F,Ni D,Wang D,Feng Z,Uyeki TM,Li Q

    更新日期:2017-08-01 00:00:00

  • Rapid emergence of ciprofloxacin-resistant enterobacteriaceae containing multiple gentamicin resistance-associated integrons in a Dutch hospital.

    abstract::In a hematology unit in the Netherlands, the incidence of ciprofloxacin-resistant Enterobacter cloacae and Escherichia coli increased from from 1996 to 1999. Clonal spread of single genotypes of both ciprofloxacin-resistant E. coli and Enterobacter cloacae from patient to patient was documented by pulsed-field gel ele...

    journal_title:Emerging infectious diseases

    pub_type: 杂志文章

    doi:10.3201/eid0705.017515

    authors: van Belkum A,Goessens W,van der Schee C,Lemmens-den Toom N,Vos MC,Cornelissen J,Lugtenburg E,de Marie S,Verbrugh H,Löwenberg B,Endtz H

    更新日期:2001-09-01 00:00:00

  • Biologic Evidence Required for Zika Disease Enhancement by Dengue Antibodies.

    abstract::The sudden appearance of overt human Zika virus infections that cross the placenta to damage fetal tissues, target sexual organs, and are followed in some instances by Guillain-Barré syndrome raises questions regarding whether these outcomes are caused by genetic mutations or if prior infection by other flaviviruses a...

    journal_title:Emerging infectious diseases

    pub_type: 杂志文章,评审

    doi:10.3201/eid2304.161879

    authors: Halstead SB

    更新日期:2017-04-01 00:00:00

  • Nasopharyngeal bacterial interactions in children.

    abstract::Antimicrobial treatments and vaccines can alter bacterial interactions in the nasopharynx, thereby altering disease processes. To better understand these interactions, we examined colonization rates of 3 respiratory bacterial pathogens among 320 children when healthy and at onset of acute otitis media (AOM). Bacterial...

    journal_title:Emerging infectious diseases

    pub_type: 杂志文章

    doi:10.3201/eid1811.111904

    authors: Xu Q,Almudervar A,Casey JR,Pichichero ME

    更新日期:2012-11-01 00:00:00

  • Risk factors for pandemic (H1N1) 2009 virus seroconversion among hospital staff, Singapore.

    abstract::We describe incidence and risk factors for pandemic (H1N1) 2009 virus infection in healthcare personnel during the June-September 2009 epidemic in Singapore. Personnel contributed 3 serologic samples during June-October 2009, with seroconversion defined as a ≥4-fold increase in hemagglutination inhibition titers to pa...

    journal_title:Emerging infectious diseases

    pub_type: 杂志文章

    doi:10.3201/eid1610.100516

    authors: Chen MI,Lee VJ,Barr I,Lin C,Goh R,Lee C,Singh B,Tan J,Lim WY,Cook AR,Ang B,Chow A,Tan BH,Loh J,Shaw R,Chia KS,Lin RT,Leo YS

    更新日期:2010-10-01 00:00:00

  • Potential use of antiviral agents in polio eradication.

    abstract::In 1988, the World Health Assembly launched the Global Polio Eradication Initiative, which aimed to use large-scale vaccination with the oral vaccine to eradicate polio worldwide by the year 2000. Although important progress has been made, polio remains endemic in several countries. Also, the current control measures ...

    journal_title:Emerging infectious diseases

    pub_type: 杂志文章

    doi:10.3201/eid1404.070439

    authors: De Palma AM,Pürstinger G,Wimmer E,Patick AK,Andries K,Rombaut B,De Clercq E,Neyts J

    更新日期:2008-04-01 00:00:00

  • Outcomes of Bedaquiline Treatment in Patients with Multidrug-Resistant Tuberculosis.

    abstract::Bedaquiline is recommended by the World Health Organization for the treatment of multidrug-resistant (MDR) and extensively drug-resistant (XDR) tuberculosis (TB). We pooled data from 5 cohorts of patients treated with bedaquiline in France, Georgia, Armenia, and South Africa and in a multicountry study. The rate of cu...

    journal_title:Emerging infectious diseases

    pub_type: 杂志文章

    doi:10.3201/eid2505.181823

    authors: Mbuagbaw L,Guglielmetti L,Hewison C,Bakare N,Bastard M,Caumes E,Fréchet-Jachym M,Robert J,Veziris N,Khachatryan N,Kotrikadze T,Hayrapetyan A,Avaliani Z,Schünemann HJ,Lienhardt C

    更新日期:2019-05-01 00:00:00

  • Preventing and controlling emerging and reemerging transmissible diseases in the homeless.

    abstract::Homelessness is an increasing public health problem. Because of poor living conditions and limited access to healthcare systems, homeless persons are exposed to many communicable infections. We summarize the intervention measures reported to be efficient for the control and the prevention of common transmissible infec...

    journal_title:Emerging infectious diseases

    pub_type: 杂志文章

    doi:10.3201/eid1409.080204

    authors: Badiaga S,Raoult D,Brouqui P

    更新日期:2008-09-01 00:00:00

  • Advanced age a risk factor for illness temporally associated with yellow fever vaccination.

    abstract::In 1998, the Centers for Disease Control and Prevention was notified of severe illnesses and one death, temporally associated with yellow fever (YF) vaccination, in two elderly U.S. residents. Because the cases were unusual and adverse events following YF vaccination had not been studied, we estimated age-related repo...

    journal_title:Emerging infectious diseases

    pub_type: 杂志文章

    doi:10.3201/eid0706.010605

    authors: Martin M,Weld LH,Tsai TF,Mootrey GT,Chen RT,Niu M,Cetron MS,GeoSentinel Yellow Fever Working Group.

    更新日期:2001-11-01 00:00:00

  • Costs and benefits of a subtype-specific surveillance system for identifying Escherichia coli O157:H7 outbreaks.

    abstract::We assessed the societal costs and benefits of a subtype-specific surveillance system for identifying outbreak-associated Escherichia coli O157:H7 infections. Using data from Colorado, we estimated that if it averted five cases annually, the system would recover all its costs. ...

    journal_title:Emerging infectious diseases

    pub_type: 杂志文章

    doi:10.3201/eid0603.000310

    authors: Elbasha EH,Fitzsimmons TD,Meltzer MI

    更新日期:2000-05-01 00:00:00

  • Vero cytotoxin-producing Escherichia coli O157 outbreaks in England and Wales, 1995: phenotypic methods and genotypic subtyping.

    abstract::Vero cytotoxin-producing Escherichia coli O157 belonging to four phage types (PTs) caused 11 outbreaks of infection in England and Wales in 1995. Outbreak strains of different PTs were distinguishable by DNA-based methods. Pulsed-field gel electrophoresis best discriminated among strains belonging to the same PT, dist...

    journal_title:Emerging infectious diseases

    pub_type: 杂志文章,评审

    doi:10.3201/eid0304.970422

    authors: Willshaw GA,Smith HR,Cheasty T,Wall PG,Rowe B

    更新日期:1997-10-01 00:00:00

  • Severe acute respiratory syndrome-associated coronavirus infection.

    abstract::Whether severe acute respiratory syndrome-associated coronavirus (SARS-CoV) infection can be asymptomatic is unclear. We examined the seroprevalence of SARS-CoV among 674 healthcare workers from a hospital in which a SARS outbreak had occurred. A total of 353 (52%) experienced mild self-limiting illnesses, and 321 (48...

    journal_title:Emerging infectious diseases

    pub_type: 杂志文章

    doi:10.3201/eid0911.030421

    authors: Chan PK,Ip M,Ng KC,Rickjason CW,Wu A,Lee N,Rainer TH,Joynt GM,Sung JJ,Tam JS

    更新日期:2003-11-01 00:00:00

  • Atypical avian influenza (H5N1).

    abstract::We report the first case of avian influenza in a patient with fever and diarrhea but no respiratory symptoms. Avian influenza should be included in the differential diagnosis for patients with predominantly gastrointestinal symptoms, particularly if they have a history of exposure to poultry. ...

    journal_title:Emerging infectious diseases

    pub_type: 杂志文章

    doi:10.3201/eid1007.040415

    authors: Apisarnthanarak A,Kitphati R,Thongphubeth K,Patoomanunt P,Anthanont P,Auwanit W,Thawatsupha P,Chittaganpitch M,Saeng-Aroon S,Waicharoen S,Apisarnthanarak P,Storch GA,Mundy LM,Fraser VJ

    更新日期:2004-07-01 00:00:00

  • Novel picornavirus in Turkey poults with hepatitis, California, USA.

    abstract::To identify a candidate etiologic agent for turkey viral hepatitis, we analyzed samples from diseased turkey poults from 8 commercial flocks in California, USA, that were collected during 2008-2010. High-throughput pyrosequencing of RNA from livers of poults with turkey viral hepatitis (TVH) revealed picornavirus sequ...

    journal_title:Emerging infectious diseases

    pub_type: 杂志文章

    doi:10.3201/eid1703.101410

    authors: Honkavuori KS,Shivaprasad HL,Briese T,Street C,Hirschberg DL,Hutchison SK,Lipkin WI

    更新日期:2011-03-01 00:00:00

  • Widespread rotavirus H in commercially raised pigs, United States.

    abstract::We investigated the presence in US pigs of rotavirus H (RVH), identified in pigs in Japan and Brazil. From 204 samples collected during 2006-2009, we identified RVH in 15% of fecal samples from 10 US states, suggesting that RVH has circulated in the United States since 2002, but probably longer. ...

    journal_title:Emerging infectious diseases

    pub_type: 杂志文章

    doi:10.3201/eid2007.140034

    authors: Marthaler D,Rossow K,Culhane M,Goyal S,Collins J,Matthijnssens J,Nelson M,Ciarlet M

    更新日期:2014-07-01 00:00:00

  • Gram-positive rod surveillance for early anthrax detection.

    abstract::Connecticut established telephone-based gram-positive rod (GPR) reporting primarily to detect inhalational anthrax cases more quickly. From March to December 2003, annualized incidence of blood isolates was 21.3/100,000 persons; reports included 293 Corynebacterium spp., 193 Bacillus spp., 73 Clostridium spp., 26 Lact...

    journal_title:Emerging infectious diseases

    pub_type: 杂志文章

    doi:10.3201/eid1109.041013

    authors: Begier EM,Barrett NL,Mshar PA,Johnson DG,Hadler JL,Connecticut Bioterrorism Field Epidemiology Response Team.

    更新日期:2005-09-01 00:00:00

  • Rise in Murine Typhus in Galveston County, Texas, USA, 2018.

    abstract::Murine typhus, an undifferentiated febrile illness caused by Rickettsia typhi, is increasing in prevalence and distribution throughout Texas. In 2018, a total of 40 cases of murine typhus were reported in Galveston County. This increase, unprecedented since the 1940s, highlights the importance of awareness by physicia...

    journal_title:Emerging infectious diseases

    pub_type: 杂志文章

    doi:10.3201/eid2605.191505

    authors: Ruiz K,Valcin R,Keiser P,Blanton LS

    更新日期:2020-05-01 00:00:00

  • Whole-Genome Analysis of Bartonella ancashensis, a Novel Pathogen Causing Verruga Peruana, Rural Ancash Region, Peru.

    abstract::The genus Bartonella contains >40 species, and an increasing number of these Bartonella species are being implicated in human disease. One such pathogen is Bartonella ancashensis, which was isolated in blood samples from 2 patients living in Caraz, Peru, during a clinical trial of treatment for bartonellosis. Three B....

    journal_title:Emerging infectious diseases

    pub_type: 杂志文章

    doi:10.3201/eid2303.161476

    authors: Mullins KE,Hang J,Clifford RJ,Onmus-Leone F,Yang Y,Jiang J,Leguia M,Kasper MR,Maguina C,Lesho EP,Jarman RG,Richards A,Blazes D

    更新日期:2017-03-01 00:00:00

  • Sexual health and sexually transmitted infections in the North American Arctic.

    abstract::Our objective was to describe the basic epidemiology of sexually transmitted infections for Arctic and sub-Arctic regions of North America. We summarized published and unpublished rates of chlamydial infection and gonorrhea reported from 2003 through 2006 for Alaska, Canada, and Greenland. In 2006, Alaska reported hig...

    journal_title:Emerging infectious diseases

    pub_type: 杂志文章

    doi:10.3201/eid1401.071112

    authors: Gesink Law D,Rink E,Mulvad G,Koch A

    更新日期:2008-01-01 00:00:00

  • Increased Invasive Pneumococcal Disease, North East England, UK.

    abstract::Since April 2014, invasive pneumococcal disease incidence has increased substantially across North East England, United Kingdom, reversing the decline that followed the 2006 introduction of pneumococcal conjugate vaccines. Significant increases occurred in 23-valent polysaccharide vaccine serotypes and nonvaccine sero...

    journal_title:Emerging infectious diseases

    pub_type: 杂志文章

    doi:10.3201/eid2301.160897

    authors: Houseman C,Hughes GJ,Chapman KE,Wilson D,Gorton R

    更新日期:2017-01-01 00:00:00

  • Quarantine methods and prevention of secondary outbreak of pandemic (H1N1) 2009.

    abstract::During the 2009 influenza (H1N1) pandemic, some countries used quarantine for containment or mitigation. Of 152 quarantined university students we studied, risk for illness was higher for students quarantined in a room with a person with a confirmed case; we found no difference between students quarantined in double o...

    journal_title:Emerging infectious diseases

    pub_type: 杂志文章

    doi:10.3201/eid1608.091787

    authors: Chu CY,Li CY,Zhang H,Wang Y,Huo DH,Wen L,Yin ZT,Li F,Song HB

    更新日期:2010-08-01 00:00:00

  • Household-level spatiotemporal patterns of incidence of cholera, Haiti, 2011.

    abstract::A cholera outbreak began in Haiti during October, 2010. Spatiotemporal patterns of household-level cholera in Ouest Department showed that the initial clusters tended to follow major roadways; subsequent clusters occurred further inland. Our data highlight transmission pathway complexities and the need for case and ho...

    journal_title:Emerging infectious diseases

    pub_type: 历史文章,杂志文章

    doi:10.3201/eid2009.131882

    authors: Blackburn JK,Diamond U,Kracalik IT,Widmer J,Brown W,Morrissey BD,Alexander KA,Curtis AJ,Ali A,Morris JG Jr

    更新日期:2014-09-01 00:00:00

  • Multicenter cross-sectional study of nontuberculous mycobacterial infections among cystic fibrosis patients, Israel.

    abstract::This 2-year cross-sectional evaluation of nontuberculous mycobacterial (NTM) infections involved all Israeli medical centers that treat cystic fibrosis patients. The study comprised 186 patients whose sputum was analyzed for NTM. The prevalence of NTM isolates was 22.6%, and 6.5% and 10.8% of the patients fulfilled th...

    journal_title:Emerging infectious diseases

    pub_type: 杂志文章,多中心研究

    doi:10.3201/eid1403.061405

    authors: Levy I,Grisaru-Soen G,Lerner-Geva L,Kerem E,Blau H,Bentur L,Aviram M,Rivlin J,Picard E,Lavy A,Yahav Y,Rahav G

    更新日期:2008-03-01 00:00:00

  • Hepatitis E virus mixed infection in immunocompetent patient.

    abstract::We detected 2 hepatitis E virus (HEV) strains in an acutely infected immunocompetent patient. Two populations of genotype 3 virus were observed in the hypervariable regions and open reading frames 2 and 3, indicating multiple infection with hepatitis E virus. Persons with mixed infections may provide the opportunity f...

    journal_title:Emerging infectious diseases

    pub_type: 杂志文章

    doi:10.3201/eid1903.121510

    authors: Smith DB,Vanek J,Wellington L,Johannessen I,Ramalingam S,Simmonds P

    更新日期:2013-03-01 00:00:00

  • Immunofluorescence assay for serologic diagnosis of SARS.

    abstract::We evaluated an indirect immunofluorescence assay based on virus-infected cells for detecting anti-severe acute respiratory syndrome-associated coronavirus (SARS-CoV) immunoglobulin (Ig) G antibody. All confirmed SARS cases demonstrated seroconversion or fourfold rise in IgG antibody titer; no control was positive. Se...

    journal_title:Emerging infectious diseases

    pub_type: 杂志文章

    doi:10.3201/eid1003.030493

    authors: Chan PK,Ng KC,Chan RC,Lam RK,Chow VC,Hui M,Wu A,Lee N,Yap FH,Cheng FW,Sung JJ,Tam JS

    更新日期:2004-03-01 00:00:00