Abstract:
:Using shotgun metagenomics, we identified an imported case of multidrug-resistant Mycobacterium leprae in a Filipino resident of Saudi Arabia in 2017. We determined the phylogenomic lineage (3K1) and identified mutations in rpoB and rrs corresponding to the multidrug-resistance phenotype clinically observed. Metagenomics sequencing can be used to identify multidrug-resistant M. leprae.
journal_name
Emerg Infect Disjournal_title
Emerging infectious diseasesauthors
Guan Q,Almutairi TS,Alhalouli T,Pain A,Alasmari Fdoi
10.3201/eid2603.190661subject
Has Abstractpub_date
2020-03-01 00:00:00pages
615-617issue
3eissn
1080-6040issn
1080-6059journal_volume
26pub_type
杂志文章abstract::The 1997-2005 tularemia outbreak in Bulgaria affected 285 people. Ten strains were isolated from humans, a tick, a hare, and water. Amplified fragment length polymorphism typing of the present isolates and of the strain isolated in 1962 suggests that a new genetic variant caused the outbreak. ...
journal_title:Emerging infectious diseases
pub_type: 杂志文章
doi:10.3201/eid1204.050709
更新日期:2006-04-01 00:00:00
abstract::We performed a case-control investigation to identify risk factors for norovirus infections among children in Vietnam. Of samples from 1,419 children who had diarrhea and 609 who were asymptomatic, 20.6% and 2.8%, respectively, were norovirus positive. Risk factors included residential crowding and symptomatic contact...
journal_title:Emerging infectious diseases
pub_type: 历史文章,杂志文章
doi:10.3201/eid1906.111862
更新日期:2013-06-01 00:00:00
abstract::In 2011, the world was declared free from rinderpest, one of the most feared and devastating infectious diseases of animals. Rinderpest is the second infectious disease, after smallpox, to have been eradicated. However, potentially infectious rinderpest virus material remains widely disseminated among research and dia...
journal_title:Emerging infectious diseases
pub_type: 杂志文章
doi:10.3201/eid2112.150227
更新日期:2015-12-01 00:00:00
abstract::During 2001-2014, predominant influenza A(H1N1) and A(H3N2) strains in South America predominated in all or most subsequent influenza seasons in Central and North America. Predominant A(H1N1) and A(H3N2) strains in North America predominated in most subsequent seasons in Central and South America. Sharing data between...
journal_title:Emerging infectious diseases
pub_type: 杂志文章
doi:10.3201/eid2107.140788
更新日期:2015-07-01 00:00:00
abstract::To determine whether guinea pigs are infected with influenza virus in nature, we conducted a serologic study in domestic guinea pigs in Ecuador. Detection of antibodies against influenza A and B raises the question about the role of guinea pigs in the ecology and epidemiology of influenza virus in the region. ...
journal_title:Emerging infectious diseases
pub_type: 杂志文章
doi:10.3201/eid1807.111930
更新日期:2012-07-01 00:00:00
abstract::From January 1995 through July 1998, we investigated the occurrence of Cyclospora cayetanensis infection associated with gastrointestinal illness or diarrhea in foreign residents and natives of West Java, Indonesia. We found that C. cayetanensis was the main protozoal cause of gastrointestinal illness and diarrhea in ...
journal_title:Emerging infectious diseases
pub_type: 杂志文章
doi:10.3201/eid0504.990426
更新日期:1999-07-01 00:00:00
abstract::We investigated a case of hepatitis E acquired after persons ate wild boar meat. Genotype 3 hepatitis E virus (HEV) RNA was detected in both patient serum and wild boar meat. These findings provided direct evidence of zoonotic foodborne transmission of HEV from a wild boar to a human. ...
journal_title:Emerging infectious diseases
pub_type: 杂志文章
doi:10.3201/eid1112.051041
更新日期:2005-12-01 00:00:00
abstract::Four major clades of Candida auris have been described, and all infections have clustered in these 4 clades. We identified an isolate representative of a potential fifth clade, separated from the other clades by >200,000 single-nucleotide polymorphisms, in a patient in Iran who had never traveled outside the country. ...
journal_title:Emerging infectious diseases
pub_type: 信件
doi:10.3201/eid2509.190686
更新日期:2019-09-01 00:00:00
abstract::Staphylococcus aureus strain sequence type (ST) 398 has emerged during the last decade, largely among persons who have contact with swine or other livestock. Although colonization with ST398 is common in livestock workers, infections are not frequently documented. We report recurrent ST398-IIa infection in an Iowa far...
journal_title:Emerging infectious diseases
pub_type: 信件
doi:10.3201/eid2401.161184
更新日期:2018-01-01 00:00:00
abstract::Community-acquired Enterobacteriaceae infection and culture-negative meningitis are rare and atypical subtypes of meningitis in adults. Of 37 patients who had atypical suppurative meningitis during 1993-2015 in Okinawa, Japan, 54.5% had strongyloidiasis, of which 9.1% cases were hyperinfections and 3.0% dissemination....
journal_title:Emerging infectious diseases
pub_type: 历史文章,信件
doi:10.3201/eid2412.180375
更新日期:2018-12-01 00:00:00
abstract::We determined the seroprevalence of severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) in an affected area in northern Iran in April 2020. Antibodies to SARS-CoV-2 were detected in 528 persons by using rapid tests. Adjusted prevalence of SARS-CoV-2 seropositivity was 22.2% (95% CI 16.4%-28.5%). ...
journal_title:Emerging infectious diseases
pub_type: 杂志文章
doi:10.3201/eid2702.201960
更新日期:2021-02-01 00:00:00
abstract::During a 2014 outbreak, 450 patients with confirmed chikungunya virus infection were admitted to the University Hospital of Pointe-à-Pitre, Guadeloupe. Of these, 110 were nonpregnant adults; 42 had severe disease, and of those, 25 had severe sepsis or septic shock and 12 died. Severe sepsis may be a rare complication ...
journal_title:Emerging infectious diseases
pub_type: 杂志文章
doi:10.3201/eid2205.151449
更新日期:2016-05-01 00:00:00
abstract::Life-threatening infections caused by the encapsulated fungal pathogen Cryptococcus neoformans have been increasing steadily over the past 10 years because of the onset of AIDS and the expanded use of immunosuppressive drugs. Intricate host-organism interactions make the full understanding of pathogenicity and virulen...
journal_title:Emerging infectious diseases
pub_type: 杂志文章,评审
doi:10.3201/eid0401.980109
更新日期:1998-01-01 00:00:00
abstract::We used portable genome sequencing to investigate reported dengue virus transmission in Angola. Our results show that autochthonous transmission of dengue serotype 2 (cosmopolitan genotype) occurred in January 2018. ...
journal_title:Emerging infectious diseases
pub_type: 杂志文章
doi:10.3201/eid2504.180958
更新日期:2019-04-01 00:00:00
abstract::After a 2014 outbreak of severe respiratory illness caused by enterovirus D68 in the United States, sporadic cases of acute flaccid myelitis have been reported worldwide. We describe a cluster of acute flaccid myelitis cases in Argentina in 2016, adding data to the evidence of association between enterovirus D68 and t...
journal_title:Emerging infectious diseases
pub_type: 历史文章,杂志文章
doi:10.3201/eid2503.170897
更新日期:2019-03-01 00:00:00
abstract::Several severe respiratory virus infections that have emerged during the past decade originated in animals, including bats. In Indonesia, exposure to bats has been associated with increased risk of acquiring orthoreovirus infection. Although orthoreovirus infections are mild and self-limiting, we explored their potent...
journal_title:Emerging infectious diseases
pub_type: 杂志文章
doi:10.3201/eid1806.111688
更新日期:2012-06-01 00:00:00
abstract::We describe an outbreak of Cyclospora cayetanensis infection among Dutch participants at a scientific meeting in September 2001 in Bogor, Indonesia. Fifty percent of the investigated participants were positive for C. cayetanensis. To our knowledge, this outbreak is the first caused by C. cayetanensis among susceptible...
journal_title:Emerging infectious diseases
pub_type: 杂志文章
doi:10.3201/eid1109.040947
更新日期:2005-09-01 00:00:00
abstract::African swine fever is a highly contagious disease of pigs in Africa. Although its persistence in Senegal may be caused by asymptomatic carriers involved in the domestic transmission cycle, we demonstrated that the soft tick Ornithodoros sonrai can be naturally infected with the causative agent. ...
journal_title:Emerging infectious diseases
pub_type: 杂志文章
doi:10.3201/eid1312.071022
更新日期:2007-12-01 00:00:00
abstract::We report the first known case of a device-related bloodstream infection involving Staphylococcus lugdunensis small-colony variants. Recurrent pacemaker-related bloodstream infection within a period of 10 months illustrates the poor clinical and microbiologic response even to prolonged antimicrobial drug therapy in a ...
journal_title:Emerging infectious diseases
pub_type: 杂志文章
doi:10.3201/eid1108.041177
更新日期:2005-08-01 00:00:00
abstract::The epidemiology of human rabies postexposure prophylaxis (PEP) in 4 upstate New York counties was described from data obtained from 2,216 incidences of PEP recorded by local health departments from 1995 to 2000. Overall annual incidence for the study period was 27 cases per 100,000 persons. Mean annual PEP incidence ...
journal_title:Emerging infectious diseases
pub_type: 杂志文章
doi:10.3201/eid1112.041278
更新日期:2005-12-01 00:00:00
abstract::Ebola virus disease (EVD) outbreaks have occurred during the past 5 decades, but none has affected European countries like the 2014 epidemic in West Africa. We used an online questionnaire to investigate risk perceptions in Germany during this epidemic peak. Our questionnaire covered risk perceptions, knowledge about ...
journal_title:Emerging infectious diseases
pub_type: 杂志文章
doi:10.3201/eid2106.150013
更新日期:2015-06-01 00:00:00
abstract::Genetic characterization of highly pathogenic avian influenza viruses (H5N1) isolated in July 2008 in Nigeria indicates that a distinct genotype, never before detected in Africa, reached the continent. Phylogenetic analysis showed that the viruses are genetically closely related to European and Middle Eastern influenz...
journal_title:Emerging infectious diseases
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更新日期:2009-03-01 00:00:00
abstract::Deletion of histidine-rich protein genes pfhrp2/3 in Plasmodium falciparum causes infections to go undetected by HRP2-based malaria rapid diagnostic tests. We analyzed P. falciparum malaria cases imported to Australia (n = 210, collected 2010-2018) for their pfhrp2/3 status. We detected gene deletions in patients from...
journal_title:Emerging infectious diseases
pub_type: 杂志文章
doi:10.3201/eid2702.191410
更新日期:2021-02-01 00:00:00
abstract::To better define areas of human Lyme disease risk, we compared US surveillance data with published data on the seroprevalence of Borrelia burgdorferi antibodies among domestic dogs. Canine seroprevalence >5% was a sensitive but nonspecific marker of human risk, whereas seroprevalence <1% was associated with minimal ri...
journal_title:Emerging infectious diseases
pub_type: 杂志文章
doi:10.3201/eid1709.110210
更新日期:2011-09-01 00:00:00
abstract::Methicillin-resistant Staphylococcus aureus (MRSA) continues to be a notable cause of hospital-acquired infections. A statewide screening and control policy was implemented in Western Australia (WA) after an outbreak of epidemic MRSA in a Perth hospital in 1982. We report on statutory notifications from 1998 to 2002 a...
journal_title:Emerging infectious diseases
pub_type: 杂志文章
doi:10.3201/eid1110.050125
更新日期:2005-10-01 00:00:00
abstract::The Federal Select Agent Program dictates that all research entities in the United States must rigorously assess laboratory protocols to sterilize samples being removed from containment areas. We validated procedures using sterile filtration and methanol to remove the following select agents: Francisella tularensis, B...
journal_title:Emerging infectious diseases
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doi:10.3201/eid2611.191630
更新日期:2020-11-01 00:00:00
abstract::Tropheryma whipplei endocarditis differs from classic Whipple disease, which primarily affects the gastrointestinal system. We diagnosed 28 cases of T. whipplei endocarditis in Marseille, France, and compared them with cases reported in the literature. Specimens were analyzed mostly by molecular and histologic techniq...
journal_title:Emerging infectious diseases
pub_type: 杂志文章,评审
doi:10.3201/eid1911.121356
更新日期:2013-11-01 00:00:00
abstract::Leishmaniasis is a zoonotic disease caused by predominantly vectorborne Leishmania spp. In the United States, canine visceral leishmaniasis is common among hounds, and L. infantum vertical transmission among hounds has been confirmed. We found that L. infantum from hounds remains infective in sandflies, underscoring t...
journal_title:Emerging infectious diseases
pub_type: 杂志文章
doi:10.3201/eid2112.141167
更新日期:2015-12-01 00:00:00
abstract::We evaluated West Nile (WN) virus seroprevalence in healthy horses, dogs, and cats in New York City after an outbreak of human WN virus encephalitis in 1999. Two (3%) of 73 horses, 10 (5%) of 189 dogs, and none of 12 cats tested positive for WN virus-neutralizing antibodies. Domestic mammals should be evaluated as sen...
journal_title:Emerging infectious diseases
pub_type: 杂志文章
doi:10.3201/eid0704.010424
更新日期:2001-07-01 00:00:00
abstract::Data are missing on the diversity of Plasmodium spp. infecting apes that live in their natural habitat, with limited possibility of human-mosquito-ape exchange. We surveyed Plasmodium spp. diversity in wild chimpanzees living in an undisturbed tropical rainforest habitat and found 5 species: P. malariae, P. vivax, P. ...
journal_title:Emerging infectious diseases
pub_type: 杂志文章
doi:10.3201/eid1612.100424
更新日期:2010-12-01 00:00:00