Analysis of Brachypodium genomes with genome-wide optical maps.

abstract：:Wide hybrids have been used in generating genetic maps of many plant species. In this study, genetic and physical mapping was performed on ph1b-induced recombinants of rye chromosome 2R in wheat (Triticum aestivum L.). All recombinants were single breakpoint translocations. Recombination 2RS-2BS was absent from the te...

journal_title：Genome

authors： Lukaszewski AJ,Rybka K,Korzun V,Malyshev SV,Lapinski B,Whitkus R

更新日期：2004-02-01 00:00:00

abstract：:DNA gel-blot and in situ hybridization with genome-specific repeated sequences have proven to be valuable tools in analyzing genome structure and relationships in species with complex allopolyploid genomes such as hexaploid oat (Avena sativa L., 2n = 6x = 42; AACCDD genome). In this report, we describe a systematic ap...

journal_title：Genome

authors： Ananiev EV,Vales MI,Phillips RL,Rines HW

更新日期：2002-04-01 00:00:00

abstract：:Plant disease resistance gene analog (RGA) markers were designed according to the conserved sequence of known RGAs and used to map resistance genes. We used genome-wide RGA markers for genetic analyses of structure and diversity in a global rice germplasm collection. Of the 472 RGA markers, 138 were polymorphic and th...

journal_title：Genome

authors： Ren J,Yu Y,Gao F,Zeng L,Lu X,Wu X,Yan W,Ren G

更新日期：2013-07-01 00:00:00

abstract：:Elymus L. is the largest and most complex genus in the Triticeae tribe of grasses with approximately 150 polyploid perennial species occurring worldwide. We report here the first genetic linkage map for Elymus. Backcross mapping populations were created by crossing caespitose Elymus wawawaiensis (EW) (Snake River whea...

journal_title：Genome

authors： Mott IW,Larson SR,Jones TA,Robins JG,Jensen KB,Peel MD

更新日期：2011-10-01 00:00:00

abstract：:The cryptic wheat-alien translocation T5DL.5DS-5MgS(0.95), with leaf rust and stripe rust resistance genes Lr57 and Yr40 transferred from Aegilops geniculata (UgMg) into common wheat, was further analyzed. Molecular genetic analysis using physically mapped ESTs showed that the alien segment in T5DL.5DS-5MgS(0.95) repr...

journal_title：Genome

authors： Kuraparthy V,Sood S,Gill BS

更新日期：2009-12-01 00:00:00

abstract：:The first doubled haploid oat linkage map constructed at MTT Agrifood Research Finland was supplemented with additional microsatellites and Diversity Array Technology (DArT) markers to produce a map containing 1058 DNA markers and 34 linkage groups. The map was used to locate quantitative trait loci (QTLs) for 11 impo...

journal_title：Genome

authors： Tanhuanpää P,Manninen O,Beattie A,Eckstein P,Scoles G,Rossnagel B,Kiviharju E

更新日期：2012-04-01 00:00:00

abstract：:A novel tandemly repeated DNA structure of Toxoplasma gondii that meets the requirements assigned for satellital DNA was characterized. A DNA fragment of 1002 bp contains two different elements of repetitive DNA families named ABGTg7 and ABGTg8.2. Both repeats are members of a more complex tandem structure where ABGTg...

journal_title：Genome

authors： Matrajt M,Angel SO,Pszenny V,Guarnera E,Roos DS,Garberi JC

更新日期：1999-04-01 00:00:00

abstract：:Two nuclear genes, vitality (Vi) on an A- or B-genome chromosome and species cytoplasm specific (scs) on a 1DL telosome from Triticum aestivum L. or a telosome from Aegilops uniaristata Vis. (un telosome), improved compatibility between the nucleus of Triticum turgidum L. var. durum and the cytoplasm of Ae. longissima...

journal_title：Genome

authors： Maan SS

更新日期：1994-04-01 00:00:00

abstract：:In this study we sequenced and analysed the complete mitochondrial (mt) genome of the Chilean predatory mite Phytoseiulus persimilis Athias-Henriot (Chelicerata: Acari: Mesostigmata: Phytoseiidae: Amblyseiinae). The 16 199 bp genome (79.8% AT) contains the standard set of 13 protein-coding and 24 RNA genes. Compared w...

journal_title：Genome

authors： Dermauw W,Vanholme B,Tirry L,Van Leeuwen T

更新日期：2010-04-01 00:00:00

abstract：:Mapping and sequencing the human genome will generate large amounts of data, which must be sorted, analyzed, and stored for rapid retrieval to complete this enormous task. Computers and their software programs provide the most important tool to the molecular biologist today. A discussion of current capabilities and fu...

journal_title：Genome

authors： Kelly MJ

更新日期：1989-01-01 00:00:00

abstract：:The genomic origin of alien chromosomes present in a wheat-Thinopyrum intermedium partial amphiploid TAF46 (2n = 8x = 56) and six derived chromosome addition lines were analyzed by genomic in situ hybridization (GISH) using S genomic DNA from Pseudoroegneria strigosa (2n = 2x = 14, SS) as a probe. The GISH analysis cl...

journal_title：Genome

authors： Chen Q,Conner RL,Laroche A,Ji WQ,Armstrong KC,Fedak G

更新日期：1999-12-01 00:00:00

abstract：:We have isolated and characterized microsatellites (simple sequence repeat (SSR) loci) from the silkworm genome. The screening of a partial genomic library by the conventional hybridization method led to the isolation of 28 microsatellites harbouring clones. The abundance of (CA)n repeats in the silkworm genome was ak...

journal_title：Genome

authors： Reddy KD,Abraham EG,Nagaraju J

更新日期：1999-12-01 00:00:00

abstract：:Aegilops is a genus belonging to the family Poaceace, which have played an indispensible role in the evolution of bread wheat and continues to do so by transferring genes by wide hybridization. Being the secondary gene pool of wheat, gene transfer from Aegilops poses difficulties and segregation distortion is common. ...

journal_title：Genome

authors： Niranjana M

更新日期：2017-08-01 00:00:00

abstract：:The Himalayan marmot (Marmota himalayana), a natural host and transmitter of plague, is also susceptible to the hepadnavirus infection. To reveal the genetic basis of the hepadnavirus susceptibility and the immune response to plague, we systematically characterized the features of immune genes in Himalayan marmot with...

journal_title：Genome

authors： Liu B,Bai L,Fu Y,Zhao S,Liu H,Wang R,Wang W,Li Y,Tao Y,Wang Z,Fan J,Liu E

更新日期：2020-06-01 00:00:00

abstract：:The results of the development of oil palm (Elaeis guineensis Jacq.) microsatellite markers are given step by step, from the screening of libraries enriched in (GA)n, (GT)n, and (CCG)n simple-sequence repeats (SSRs) to the final characterisation of 21 SSR loci. Also published are primer sequences, estimates of allele ...

journal_title：Genome

authors： Billotte N,Risterucci AM,Barcelos E,Noyer JL,Amblard P,Baurens FC

更新日期：2001-06-01 00:00:00

abstract：:As part of a project on lentil molecular genetics, the sequence of the 18S-25S ribosomal RNA gene intergenic spacer (IGS) of Lens culinaris Medik. was determined. DNA was cloned after polymerase chain reaction (PCR) amplification. The spacer of 2939 bp was composed of nonrepetitive sequences and four tandem arrays of ...

journal_title：Genome

authors： Fernández M,Polanco C,Ruiz ML,Pérez de la Vega M

更新日期：2000-08-01 00:00:00

abstract：:The objectives of the present research were to determine the effects of water stress on seed-quality traits and to map QTLs controlling the studied traits under two different water treatments in a population of sunflower recombinant inbred lines (RILs). Two experiments were conducted in greenhouse and field conditions...

journal_title：Genome

authors： Ebrahimi A,Maury P,Berger M,Kiani SP,Nabipour A,Shariati F,Grieu P,Sarrafi A

更新日期：2008-08-01 00:00:00

abstract：:The morphological picture of primate phylogeny has not unambiguously identified the nearest outgroup of Anthropoidea and has not resolved the branching pattern within Hominoidea. The molecular picture provides more resolution and clarifies the systematics of Hominoidea. Protein and DNA evidence divides Hominoidea into...

journal_title：Genome

authors： Goodman M,Koop BF,Czelusniak J,Fitch DH,Tagle DA,Slightom JL

更新日期：1989-01-01 00:00:00

abstract：:Fusarium head blight (FHB) is one of the most important fungal wheat diseases worldwide. Understanding the genetics of FHB resistance is the key to facilitating the introgression of different FHB resistance genes into adapted wheat. The objectives of the present study were to detect and map quantitative trait loci (QT...

journal_title：Genome

authors： Yang Z,Gilbert J,Fedak G,Somers DJ

更新日期：2005-04-01 00:00:00

abstract：:Quantitative trait locus (QTL) analysis was used to study the evolution of genes controlling the timing of flowering in four Brassica genomes that are all extensively replicated. Comparative mapping showed that a chromosomal region from the top of Arabidopsis thaliana chromosome 5 corresponded to three homoeologous co...

journal_title：Genome

authors： Axeisson T,Shavorskaya O,Lagercrantz U

更新日期：2001-10-01 00:00:00

abstract：:A survey of restriction fragment polymorphism in mitochondrial DNA (mtDNA) of 17 populations of the mosquito Aedes albopictus was undertaken. The mtDNA size was estimated to be about 17.5 kbp. The level of polymorphism was low, with over 99% of the fragments being shared in common among the 17 populations. Three popul...

journal_title：Genome

authors： Kambhampati S,Rai KS

更新日期：1991-04-01 00:00:00

abstract：:Disease resistance gene candidates (RGCs) belonging to the nucleotide-binding site (NBS) superfamily have been cloned from numerous crop plants using highly conserved DNA sequence motifs. The aims of this research were to (i) isolate genomic DNA clones for RGCs in cultivated sunflower (Helianthus annuus L.) and (ii) m...

journal_title：Genome

authors： Gedil MA,Slabaugh MB,Berry S,Johnson R,Michelmore R,Miller J,Gulya T,Knapp SJ

更新日期：2001-04-01 00:00:00

abstract：:Genetic variation in Gir cattle (Bos indicus) has so far not been well characterized. In this study, we used whole genome sequencing of three Gir bulls and a pooled sample from another 11 bulls to identify polymorphisms and loci under selection. A total of 9 990 733 single nucleotide polymorphisms (SNPs) and 604 308 i...

journal_title：Genome

authors： Liao X,Peng F,Forni S,McLaren D,Plastow G,Stothard P

更新日期：2013-10-01 00:00:00

abstract：:The spectrum of resistance to isolates of Leptosphaeria maculans and the map location of a new blackleg resistance gene found in the canola cultivar Brassica napus 'Surpass 400' are described. Two blackleg resistance genes, LepR1 and LepR2, from B. rapa subsp. sylvestris and introgressed in B. napus were identified pr...

journal_title：Genome

authors： Yu F,Lydiate DJ,Rimmer SR

更新日期：2008-01-01 00:00:00

abstract：:This paper describes a series of winter wheat - winter barley disomic addition lines developed from hybrids between winter wheat line Triticum aestivum L. 'Martonvásári 9 kr1' and the German 2-rowed winter barley cultivar Hordeum vulgare L. 'Igri'. The barley chromosomes in a wheat background were identified from the ...

journal_title：Genome

authors： Szakács E,Molnár-Láng M

更新日期：2007-01-01 00:00:00

abstract：:Asexual lineages in the parasitoid wasp Lysiphlebus fabarum (Hymenoptera: Braconidae: Aphidiinae) have previously been shown to have occasionally undergone sexual reproduction and recombination with males from related sexual populations. In the present study, the cytogenetic system of asexual females in this species i...

journal_title：Genome

authors： Belshaw R,Quicke DL

更新日期：2003-02-01 00:00:00

abstract：:We have developed 21 new microsatellites in the model diploid perennial species Fragaria vesca from an enriched genomic library developed using F. vesca 'Ruegen'. The transferability of the primer pairs to other Fragaria species was high; all 31 primer pairs produced amplicons in 3 accessions of the octoploid strawber...

journal_title：Genome

authors： Hadonou AM,Sargent DJ,Wilson F,James CM,Simpson DW

更新日期：2004-06-01 00:00:00

abstract：:The NADH-specific and NAD(P)H-bispecific nitrate reductase genes from barley have been cloned and sequenced. To determine if the Nar7 locus encodes the NAD(P)H-bispecific nitrate reductase structural gene, a cross was made between a wild-type cultivar, Morex (Nar7 Nar7), and Az70 (nar7w nar7w), a mutant from the culti...

journal_title：Genome

authors： Warner RL,Kudrna DA,Kleinhofs A

更新日期：1995-08-01 00:00:00

abstract：:This paper describes the detection of a polymorphism within the growth hormone (GH) gene of the fish barramundi (Lates calcarifer). PCR amplification of barramundi genomic DNA generated three different sized products: A, 409 bp; B, 478 bp; and H, 520 bp. Each barramundi isolate displayed one of four different types of...

journal_title：Genome

authors： Yowe DL,Epping RJ

更新日期：1996-10-01 00:00:00

abstract：:Twenty-nine lines with deletions in the Lr19 ('Indis') translocated chromosome segment were used to physically map three Thinopyrum RFLP loci as well as the Sr25 and Sd1 loci. From the data, the relative locations of marker loci on the translocation were determined as: Sd1, Xpsr165, Xpsr105, Xps129, Lr19, Wsp-D1, Sr25...

journal_title：Genome

authors： Prins R,Marais GF,Marais AS,Janse BJ,Pretorius ZA

更新日期：1996-10-01 00:00:00