Application of resistance gene analog markers to analyses of genetic structure and diversity in rice.

abstract：:Although little is known about the molecular organization of most genes within heterochromatin, the unusual properties of these chromosomal regions suggest that genes therein may be organized and expressed very differently from those in euchromatin. We report here the cloning, by P transposon tagging, of sequences ass...

journal_title：Genome

authors： Devlin RH,Holm DG,Morin KR,Honda BM

更新日期：1990-06-01 00:00:00

abstract：:Polymerase chain reaction was used, with single 10-mer primers of arbitrary sequence, to amplify random regions of genomic DNA from a diploid cultivated alfalfa backcross population. Segregation of the random amplified polymorphic DNA (RAPD) fragments was analysed to determine if RAPD markers are suitable for use as g...

journal_title：Genome

authors： Echt CS,Erdahl LA,McCoy TJ

更新日期：1992-02-01 00:00:00

abstract：:Polymorphic expressed sequence tag - simple sequence repeat (EST-SSR) markers derived from major cereal crops were used to assess the genetic diversity of the USDA temperate bamboo collection consisting of 92 accessions classified in 11 separate genera and 44 species. A total of 211 bands were detected with a mean num...

journal_title：Genome

authors： Barkley NA,Newman ML,Wang ML,Hotchkiss MW,Pederson GA

更新日期：2005-08-01 00:00:00

abstract：:Septoria speckled leaf blotch (SSLB), caused by Septoria passerinii, is one of the most important foliar diseases of barley (Hordeum vulgare L.) in North America. The primary problem caused by this disease is substantial yield loss. The objective of this study was to determine the chromosomal location of SSLB resistan...

journal_title：Genome

authors： Yu GT,Franckowiak JD,Lee SH,Horsley RD,Neate SM

更新日期：2010-08-01 00:00:00

abstract：:Knowledge of the inheritance of C-glycosyl flavone synthesis in maize (Zea mays L.) silk tissues has been acquired through detailed genetic studies involving primarily germplasm from the Corn Belt Dent race. To test the robustness of this genetic knowledge, we examined C-glycosyl flavone synthesis in a genetically dis...

journal_title：Genome

authors： Lee EA,Staebler JM,Grainger C,Snook ME

更新日期：2009-01-01 00:00:00

abstract：:Eucalyptus globulus subsp. globulus Labill. (Tasmanian Blue Gum), native to southeast Australia, is a benchmark species for the pulp and paper industry. We genotyped 397 trees from 16 populations of E. globulus representing the native diversity in Australia using 24 microsatellite loci. Eight genetically distinct grou...

journal_title：Genome

authors： Costa J,Vaillancourt RE,Steane DA,Jones RC,Marques C

更新日期：2017-09-01 00:00:00

abstract：:A DNA sequence, pOs6.20, was cloned from the nuclear genome of cultivated rice (Oryza sativa L.) by hybridization with a human minisatellite sequence. At high hybridization stringency, a subfragment of the rice sequence, pOs6.20.3, detected low-copy restriction fragment length polymorphisms (RFLPs), which behaved as M...

journal_title：Genome

authors： Dallas JF,McIntyre CL,Gustafson JP

更新日期：1993-06-01 00:00:00

abstract：:Oilseed rape (Brassica napus) is an allotetraploid species consisting of two genomes, derived from B. rapa (A genome) and B. oleracea (C genome). The presence of these two genomes makes single nucleotide polymorphism (SNP) marker identification and SNP analysis more challenging than in diploid species, as for a given ...

journal_title：Genome

authors： Durstewitz G,Polley A,Plieske J,Luerssen H,Graner EM,Wieseke R,Ganal MW

更新日期：2010-11-01 00:00:00

abstract：:Most information about the molecular biology of phaseolin, the major seed storage protein in Phaseolus vulgaris, has been obtained from the T-type phaseolin, which is characteristic of the Andean gene pool of the species. In the work reported here, two cDNA clones for the S-type phaseolin representing the other major,...

journal_title：Genome

authors： Kami JA,Gepts P

更新日期：1994-10-01 00:00:00

abstract：:Cashew (Anacardium occidentale L.), introduced into India about 400 years ago, is distributed widely in the coastal regions as spontaneous populations as well as in cultivation. Despite the plant's commercial exploitation, little is known about its actual introduction and diversification. We attempted to construct the...

journal_title：Genome

authors： Archak S,Gaikwad AB,Swamy KR,Karihaloo JL

更新日期：2009-03-01 00:00:00

abstract：:Comparative RFLP linkage maps were constructed using five segregating populations derived from two self-incompatible lines (termed PI 230582 and PI 458314) of diploid tuber-bearing Solanum chacoense Bitt. The analysis was based on 84 RFLP loci identified by 73 different cDNA clones. Distortion of expected Mendelian se...

journal_title：Genome

authors： Rivard SR,Cappadocia M,Landry BS

更新日期：1996-08-01 00:00:00

abstract：:The "rings" belonging to the genus Ypthima are amongst the most common butterflies in Peninsular Malaysia. However, the species can be difficult to tell apart, with keys relying on minor and often non-discrete ring characters found on the hindwing. Seven species have been reported from Peninsular Malaysia, but this is...

journal_title：Genome

authors： Jisming-See SW,Sing KW,Wilson JJ

更新日期：2016-10-01 00:00:00

abstract：:Three long terminal repeat (LTR) sequences of Ty1-copia retrotransposons were identified in cucumber (Cucumis sativus L.) and named Tcs 1, Tcs 2, and Tcs 3. A sequence-specific amplification polymorphism (SSAP) marker system based on these LTR sequences displayed a higher level of polymorphism than AFLPs in cucumber. ...

journal_title：Genome

authors： Lou Q,Chen J

更新日期：2007-09-01 00:00:00

abstract：:The isolation, physical, and genetic mapping of a group of wheat genes expressed in infected heads of Triticum aestivum 'Frontana' resistant to Fusarium head blight is reported. A cDNA library was built from heads of 'Frontana' through suppressive subtractive hybridization, to enrich for sequences induced by the patho...

journal_title：Genome

authors： Han FP,Fedak G,Ouellet T,Dan H,Somers DJ

更新日期：2005-02-01 00:00:00

abstract：:Genome size is an indicator of evolutionary distance and a metric for genome characterization. Here, we report accurate estimates of genome size in 99 accessions from 26 species of Avena. We demonstrate that the average genome size of C genome diploid species (2C = 10.26 pg) is 15% larger than that of A genome species...

journal_title：Genome

authors： Yan H,Martin SL,Bekele WA,Latta RG,Diederichsen A,Peng Y,Tinker NA

更新日期：2016-03-01 00:00:00

abstract：:All mRNAs on the yeast mitochondrial genome terminate at a conserved dodecamer sequence 5'-AAUAAUAUUCUU-3'. We have characterized two mutants with altered dodecamers. One contains a deletion of the dodecamer at the end of the var1 gene, and the other contains two adjacent transversions in the dodecamer at the end of t...

journal_title：Genome

authors： Butow RA,Zhu H,Perlman P,Conrad-Webb H

更新日期：1989-01-01 00:00:00

abstract：:In this paper we analyze genetically and cytologically a Y-chromosome 2 translocation with several markers, some of which are potentially useful for large scale sex separation. The breakpoint of this Y-2 translocation is located at region 6B on the trichogene polytene chromosome map. It is found that, in strains carry...

journal_title：Genome

authors： Cladera JL,Delprat MA

更新日期：1995-12-01 00:00:00

abstract：:Restriction endonuclease TaqI has been known as a nonbanding restriction endonuclease when it is used on fixed human chromosomes. However, a specific TaqI digestion can be obtained after varying experimental conditions such as concentration of enzyme, time of incubation, and volume of the final reaction mixture. This ...

journal_title：Genome

authors： Tagarro I,González-Aguilera JJ,Fernández-Peralta AM

更新日期：1991-04-01 00:00:00

abstract：:Somatic karyotypes of the nine annual species of Cicer (2n = 16) were analyzed using C-banding. Highly significant differences in haploid genome length and C-band positive heterochromatin content were observed. The haploid genome length ranged from 20.0 μm in the wild species C. judaicum to 28.7 μm in the cultiv...

journal_title：Genome

authors： Tayyar RI,Lukaszewski AJ,Waines JG

更新日期：1994-08-01 00:00:00

abstract：:Striga gesnerioides is a root hemiparasite that primarily parasitizes dicotyledonous species, including cowpea (Vigna unguiculata L.) and other legumes. Based on the differential resistance response of various cultivars, landraces, and breeding lines, it has been proposed that several distinct races of cowpea-parasiti...

journal_title：Genome

authors： Botanga CJ,Timko MP

更新日期：2006-11-01 00:00:00

abstract：:The emergence of next generation sequencing has increased by several orders of magnitude the amount of data available for phylogenetics. Reduced representation approaches, such as restriction-sited associated DNA sequencing (RADseq), have proven useful for phylogenetic studies of non-model species at a wide range of p...

journal_title：Genome

authors： Fitz-Gibbon S,Hipp AL,Pham KK,Manos PS,Sork VL

更新日期：2017-09-01 00:00:00

abstract：:Multiple-target fluorescence in situ hybridization (FISH) was applied on mitotic chromosomes of seven Lens taxa using two highly repetitive sequences (pLc30 and pLc7) isolated from the cultivated lentil and the multigene families for the 18S-5.8S-25S (pTa71) and 5S rRNA (pTa794) from wheat simultaneously as probes. Th...

journal_title：Genome

authors： Galasso I

更新日期：2003-12-01 00:00:00

abstract：:A major locus conferring resistance to the causal organism of powdery mildew, Erysiphe polygoni DC, in mungbean (Vigna radiata L. Wilczek) was identified using QTL analysis with a population of 147 recombinant inbred individuals. The population was derived from a cross between 'Berken', a highly susceptible variety, a...

journal_title：Genome

authors： Humphry ME,Magner T,McIntyre CL,Aitken EA,Liu CJ

更新日期：2003-10-01 00:00:00

abstract：:Nematodes are frequently cited as underrepresented in faunistic surveys using DNA barcoding with COI. This underrepresentation is generally attributed to a limited presence of nematodes in DNA databases which, in turn, is often ascribed to structural variability and high evolutionary rates in nematode mitochondrial ge...

journal_title：Genome

authors： Powers TO,Harris TS,Higgins RS,Mullin PG,Powers KS

更新日期：2020-06-11 00:00:00

abstract：:Aneuploidy has previously been observed in the Pacific oyster, Crassostrea gigas, and shown to be negatively correlated with growth. Moreover, a significant impact of atrazine exposure has been described in C. gigas, and persistence of that effect has been observed between generations. Evidence of differential chromos...

journal_title：Genome

authors： Bouilly K,Leitão A,Chaves R,Guedes-Pinto H,Boudry P,Lapègue S

更新日期：2005-02-01 00:00:00

abstract：:Genotyping-by-sequencing (GBS) is a rapid, flexible, low-cost, and robust genotyping method that simultaneously discovers variants and calls genotypes within a broad range of samples. These characteristics make GBS an excellent tool for many applications and research questions from conservation biology to functional g...

journal_title：Genome

authors： Torkamaneh D,Laroche J,Belzile F

更新日期：2020-11-01 00:00:00

abstract：:Unisexual Ambystoma are the oldest known unisexual vertebrates and comprise a lineage of eastern North American all female salamanders that reproduce by stealing sperm from as many as five normally bisexual congeneric species. The sperm may be used to only stimulate egg development by gynogenesis but can be incorporat...

journal_title：Genome

authors： Bogart JP

更新日期：2019-08-01 00:00:00

abstract：:A key breeding objective in oat (Avena sativa L.) is cultivars with high and low beta-glucan content. In a targeted strategy to develop PCR-based markers linked to published beta-glucan content quantitative trait loci (QTLs) regions, 15 random amplified polymorphic DNA (RAPD) fragments were cloned and their sequences ...

journal_title：Genome

authors： Orr W,Molnar SJ

更新日期：2008-06-01 00:00:00

abstract：:Segregation patterns of polymorphic simple sequence repeat (SSR) primer pairs were investigated in monoploid potato families derived from anther culture. A total of 14 primers developed from the sequences in the database, as well as from a genomic library of potato, was used. Distorted segregation was observed for sev...

journal_title：Genome

authors： Chani E,Ashkenazi V,Hillel J,Veilleux RE

更新日期：2002-04-01 00:00:00

abstract：:Red clover is an important forage legume species for temperate regions and very little is known about the genetic organization of its breeding populations. We used random amplified polymorphic DNA (RAPD) genetic markers to address the genetic diversity and the distribution of variation in 20 breeding populations and c...

journal_title：Genome

authors： Ulloa O,Ortega F,Campos H

更新日期：2003-08-01 00:00:00