Gene Editing and Systems Biology Tools for Pesticide Bioremediation: A Review.

abstract：:As a natural severe contaminant of stored grains and other crops worldwide, Aspergillus flavus can produce aflatoxins (AFs), the most powerful naturally producing toxic and hepatocarcinogenic compounds. AFs production is regulated by diverse factors including AFs cluster genes, transcription factors, regulators, and e...

journal_title：Frontiers in microbiology

authors： Li X,Jiang Y,Ma L,Ma X,Liu Y,Shan J,Ma K,Xing F

更新日期：2020-07-14 00:00:00

abstract：:Staphylococcus aureus is one of the most important contagious mastitis pathogens in dairy cattle. Due to its zoonotic potential, control of S. aureus is not only of great economic importance in the dairy industry but also a significant public health concern. The aim of this study was to decipher the potential of bovin...

journal_title：Frontiers in microbiology

authors： Kümmel J,Stessl B,Gonano M,Walcher G,Bereuter O,Fricker M,Grunert T,Wagner M,Ehling-Schulz M

更新日期：2016-10-13 00:00:00

abstract：:In this study, four strains of Lactobacillus casei, as viable cells or cell-free extracts (CFE), were added to elderberry juice in order to evaluate their effect on phenolic and aromatic profile. Two of them were able to grow in juice while the others showed zero-growth. The same strains were lysed and added as extrac...

journal_title：Frontiers in microbiology

authors： Ricci A,Levante A,Cirlini M,Calani L,Bernini V,Del Rio D,Galaverna G,Neviani E,Lazzi C

更新日期：2018-11-20 00:00:00

abstract：:Type three secretion system (T3SS) is essential for Ralstonia solanacearum to cause disease in host plants and we previously screened AroG1 as a candidate with impact on the T3SS expression. Here, we focused on two putative DAHP synthases of AroG1 and AroG2, which control the first step of the shikimate pathway, a com...

journal_title：Frontiers in microbiology

authors： Zhang W,Li J,Shi X,Hikichi Y,Zhang Y,Ohnishi K

更新日期：2019-02-12 00:00:00

abstract：:Acetate is a characteristic by-product of Escherichia coli K-12 growing in batch cultures with glucose, both under aerobic as well as anaerobic conditions. While the reason underlying aerobic acetate production is still under discussion, during anaerobic growth acetate production is important for ATP generation by sub...

journal_title：Frontiers in microbiology

authors： Schütze A,Benndorf D,Püttker S,Kohrs F,Bettenbrock K

更新日期：2020-02-21 00:00:00

abstract：:The structure and function of the plant microbiome is driven by plant species and prevailing environmental conditions. Effectuated by breeding efforts, modern crops diverge genetically and phenotypically from their wild relatives but little is known about consequences for the associated microbiota. Therefore, we studi...

journal_title：Frontiers in microbiology

authors： Zachow C,Müller H,Tilcher R,Berg G

更新日期：2014-08-26 00:00:00

abstract：:Coastal zones are transitional areas between land and sea where large amounts of organic and inorganic carbon compounds are recycled by microbes. Especially shallow zones near land have been shown to be the main source for oceanic methane (CH4) emissions. Water depth has been predicted as the best explanatory variable...

journal_title：Frontiers in microbiology

authors： Broman E,Sun X,Stranne C,Salgado MG,Bonaglia S,Geibel M,Jakobsson M,Norkko A,Humborg C,Nascimento FJA

更新日期：2020-07-07 00:00:00

abstract：:Guanylate kinases (GKs), which convert guanosine monophosphate into guanosine diphosphate (GDP), are important for growth and mannose outer chain elongation of cell wall N-linked glycoproteins in yeast. Here, we identified the ortholog of Saccharomyces cerevisiae GK Guk1, named MoGuk1 and a novel family of fungal GKs ...

journal_title：Frontiers in microbiology

authors： Cai X,Zhang X,Li X,Liu M,Liu X,Wang X,Zhang H,Zheng X,Zhang Z

更新日期：2017-12-11 00:00:00

abstract：:Alphaviruses and flaviviruses are important human pathogens that include Chikungunya virus (CHIKV), Dengue virus (DENV), and Zika virus (ZIKV), which can cause diseases in humans ranging from arthralgia to hemorrhagic fevers and microcephaly. It was previously shown that treatment with surface layer (S-layer) protein,...

journal_title：Frontiers in microbiology

authors： Prado Acosta M,Geoghegan EM,Lepenies B,Ruzal S,Kielian M,Martinez MG

更新日期：2019-04-16 00:00:00

abstract：:Given that the degradation of aromatic pollutants in anaerobic environments such as sediment is generally very slow, aeration could be an efficient bioremediation option. Using stable isotope probing (SIP) coupled with pyrosequencing analysis of 16S rRNA genes, we identified naphthalene-utilizing populations in aerate...

journal_title：Frontiers in microbiology

authors： Wald J,Hroudova M,Jansa J,Vrchotova B,Macek T,Uhlik O

更新日期：2015-11-19 00:00:00

abstract：:[This corrects the article DOI: 10.3389/fmicb.2020.01776.]. ...

journal_title：Frontiers in microbiology

authors： Lemieux-Labonté V,Dorville NAS,Willis CKR,Lapointe FJ

更新日期：2020-10-26 00:00:00

abstract：:The search for novel renewable products over synthetics hallmarked this decade and those of the recent past. Most economies that are prospecting on biodiversity for improved bio-economy favor renewable resources over synthetics for the potential opportunity they hold. However, this field is still nascent as the bulk o...

journal_title：Frontiers in microbiology

authors： Nnolim NE,Udenigwe CC,Okoh AI,Nwodo UU

更新日期：2020-12-18 00:00:00

abstract：:Volvariella volvacea is a typical edible Basidiomycete with a high-temperature tolerance. It has a strong fibrinolysis capability and consumes abundant agricultural wastes. In agricultural cultivation, mycelial subculturing has been adopted, leading to serious strain degeneration. In this study, continuous mycelial su...

journal_title：Frontiers in microbiology

authors： Chen X,Zhang Z,Liu X,Cui B,Miao W,Cheng W,Zhao F

更新日期：2019-09-03 00:00:00

abstract：:The increased association of enterohemorrhagic Escherichia coli (EHEC) with veal calves has led the United States Department of Agriculture Food Safety and Inspection Service to report results of veal meat contaminated with the Top 7 serogroups separately from beef cattle. However, detection methods that can also prov...

journal_title：Frontiers in microbiology

authors： Luedtke BE,Bosilevac JM

更新日期：2015-09-29 00:00:00

abstract：:Pathogenic fungi have diverse growth lifestyles that support fungal colonization on plants. Successful colonization and infection for all lifestyles depends upon the ability to modify living host plants to sequester the necessary nutrients required for growth and reproduction. Secretion of virulence determinants refer...

journal_title：Frontiers in microbiology

authors： Selin C,de Kievit TR,Belmonte MF,Fernando WG

更新日期：2016-04-27 00:00:00

abstract：:Toxoplasma gondii is the causative agent for toxoplasmosis. The rhoptry protein 1 (ROP1) is secreted by rhoptry, an apical secretory organelle of the parasite. ROP1 plays an important role in host cell invasion. In this study, the efficacy of ROP1 as a vaccine candidate against toxoplasmosis was evaluated through intr...

journal_title：Frontiers in microbiology

authors： Sonaimuthu P,Ching XT,Fong MY,Kalyanasundaram R,Lau YL

更新日期：2016-05-27 00:00:00

abstract：:Desulfotomaculum reducens strain MI-1 is a Gram-positive, sulfate-reducing bacterium also capable of reducing Fe(III). Metal reduction in Gram-positive bacteria is poorly understood. Here, we investigated Fe(III) reduction with lactate, a non-fermentable substrate, as the electron donor. Lactate consumption is concomi...

journal_title：Frontiers in microbiology

authors： Dalla Vecchia E,Shao PP,Suvorova E,Chiappe D,Hamelin R,Bernier-Latmani R

更新日期：2014-08-19 00:00:00

abstract：:Streptococcus pneumoniae (S.pneumoniae) is a major human pathogen causing morbidity and mortality worldwide. Efficiently acquiring iron from the environment is critical for S. pneumoniae to sustain growth and cause infection. There are only three known iron-uptake systems in Streptococcal species responsible for iron ...

journal_title：Frontiers in microbiology

authors： Yang XY,He K,Du G,Wu X,Yu G,Pan Y,Zhang G,Sun X,He QY

更新日期：2016-02-03 00:00:00

abstract：:Viral infections by sexual and droplet transmission routes typically spread through a complex host-to-host contact network. Clarifying the transmission network and epidemiological parameters affecting the variations and dynamics of a specific pathogen is a major issue in the control of infectious diseases. However, co...

journal_title：Frontiers in microbiology

authors： Shiino T

更新日期：2012-07-31 00:00:00

abstract：:Organic farming system and sustainable management of soil pathogens aim at reducing the use of agricultural chemicals in order to improve ecosystem health. Despite the essential role of microbial communities in agro-ecosystems, we still have limited understanding of the complex response of microbial diversity and comp...

journal_title：Frontiers in microbiology

authors： Lupatini M,Korthals GW,de Hollander M,Janssens TK,Kuramae EE

更新日期：2017-01-04 00:00:00

abstract：:The mosquito-borne West Nile virus (WNV) is a highly neurovirulent Flavivirus currently representing an emergent zoonotic concern. WNV cycles in nature between mosquito vectors and birds that act as amplifier hosts and play an essential role in virus ecology, being, thus, WNV a threat to many species. Availability of ...

journal_title：Frontiers in microbiology

authors： Jiménez de Oya N,Escribano-Romero E,Camacho MC,Blazquez AB,Martín-Acebes MA,Höfle U,Saiz JC

更新日期：2019-06-05 00:00:00

abstract：:Alternaria brassicicola is a necrotrophic fungus causing black spot disease and is an economically important seed-borne pathogen of cultivated brassicas. Seed transmission is a crucial component of its parasitic cycle as it promotes long-term survival and dispersal. Recent studies, conducted with the Arabidopsis thali...

journal_title：Frontiers in microbiology

authors： N'Guyen GQ,Raulo R,Marchi M,Agustí-Brisach C,Iacomi B,Pelletier S,Renou JP,Bataillé-Simoneau N,Campion C,Bastide F,Hamon B,Mouchès C,Porcheron B,Lemoine R,Kwasiborski A,Simoneau P,Guillemette T

更新日期：2019-08-30 00:00:00

abstract：:Two-component regulatory systems (TCSSs) are key regulatory elements responsible for the adaptation of bacteria to environmental stresses. A classical TCSS is typically comprised of a sensory histidine kinase and a corresponding response regulator. Here, we used homologous recombination to construct a Mycobacterium sm...

journal_title：Frontiers in microbiology

authors： Dadura K,Płocińska R,Rumijowska-Galewicz A,Płociński P,Żaczek A,Dziadek B,Zaborowski A,Dziadek J

更新日期：2017-11-03 00:00:00

abstract：:The ocean is considered to be a great reservoir of biodiversity. Microbial communities in marine environments are ecologically relevant as intermediaries of energy, and play an important role in nutrient regeneration cycles as decomposers of dead and decaying organic matter. In this sense, marine-derived fungi can be ...

journal_title：Frontiers in microbiology

authors： Bonugli-Santos RC,Dos Santos Vasconcelos MR,Passarini MR,Vieira GA,Lopes VC,Mainardi PH,Dos Santos JA,de Azevedo Duarte L,Otero IV,da Silva Yoshida AM,Feitosa VA,Pessoa A Jr,Sette LD

更新日期：2015-04-10 00:00:00

abstract：:Soft rot caused by numerous species of Pectobacterium and Dickeya is a serious threat to the world production of potatoes. The application of bacteriophages to combat bacterial infections in medicine, agriculture, and the food industry requires the selection of comprehensively studied lytic phages and the knowledge of...

journal_title：Frontiers in microbiology

authors： Lukianova AA,Shneider MM,Evseev PV,Shpirt AM,Bugaeva EN,Kabanova AP,Obraztsova EA,Miroshnikov KK,Senchenkova SN,Shashkov AS,Toschakov SV,Knirel YA,Ignatov AN,Miroshnikov KA

更新日期：2020-01-23 00:00:00

abstract：:Enterococcus mundtii strains isolated from the larval feces of the Mediterranean flour moth Ephestia kuehniella show antimicrobial activity against a broad spectrum of Gram-positive and Gram-negative bacteria. The in vitro probiotic characterization of one isolate revealed a high auto-aggregation score, a hydrophilic ...

journal_title：Frontiers in microbiology

authors： Grau T,Vilcinskas A,Joop G

更新日期：2017-07-07 00:00:00

abstract：:In poultry farming, the spread of bacterial pathogens results in disease outbreaks causing significant economic losses to this industry. Many of these pathogenic bacteria are zoonotic and have a substantial impact on public health. Antimicrobials are essential for the prevention and treatment of these bacterial infect...

journal_title：Frontiers in microbiology

authors： Aranda MIR,Gómez GAT,de Barros M,Dos Santos MH,de Oliveira LL,Pena JL,Moreira MAS

更新日期：2019-03-20 00:00:00

abstract：:Carbapenem-resistant Enterobacteriaceae (CRE) cause health care-associated infections worldwide, and they are of severe concern due to limited treatment options. We report an outbreak of KPC-2-producing CRE that was caused by horizontal transmission of a promiscuous plasmid across different genera of bacteria and hosp...

journal_title：Frontiers in microbiology

authors： Schweizer C,Bischoff P,Bender J,Kola A,Gastmeier P,Hummel M,Klefisch FR,Schoenrath F,Frühauf A,Pfeifer Y

更新日期：2019-02-19 00:00:00

abstract：:Biological nitrogen fixation plays a crucial role in the nitrogen cycle. An ability to fix atmospheric nitrogen, reducing it to ammonium, was described for multiple species of Bacteria and Archaea. The transcriptional regulatory network for nitrogen fixation was extensively studied in several representatives of the cl...

journal_title：Frontiers in microbiology

authors： Tsoy OV,Ravcheev DA,Čuklina J,Gelfand MS

更新日期：2016-08-26 00:00:00

abstract：:Current knowledge about the relationships between ruminal bacterial communities and metabolite profiles in the yak rumen is limited. This is due to differences in the nutritional and metabolic features between yak and other ordinary cattle combined with difficulties associated with farm-based research and a lack of te...

journal_title：Frontiers in microbiology

authors： Liu C,Wu H,Liu S,Chai S,Meng Q,Zhou Z

更新日期：2019-05-22 00:00:00