The Impact of ackA, pta, and ackA-pta Mutations on Growth, Gene Expression and Protein Acetylation in Escherichia coli K-12.

Abstract:

:Acetate is a characteristic by-product of Escherichia coli K-12 growing in batch cultures with glucose, both under aerobic as well as anaerobic conditions. While the reason underlying aerobic acetate production is still under discussion, during anaerobic growth acetate production is important for ATP generation by substrate level phosphorylation. Under both conditions, acetate is produced by a pathway consisting of the enzyme phosphate acetyltransferase (Pta) producing acetyl-phosphate from acetyl-coenzyme A, and of the enzyme acetate kinase (AckA) producing acetate from acetyl-phosphate, a reaction that is coupled to the production of ATP. Mutants in the AckA-Pta pathway differ from each other in the potential to produce and accumulate acetyl-phosphate. In the publication at hand, we investigated different mutants in the acetate pathway, both under aerobic as well as anaerobic conditions. While under aerobic conditions only small changes in growth rate were observed, all acetate mutants showed severe reduction in growth rate and changes in the by-product pattern during anaerobic growth. The AckA- mutant showed the most severe growth defect. The glucose uptake rate and the ATP concentration were strongly reduced in this strain. This mutant exhibited also changes in gene expression. In this strain, the atoDAEB operon was significantly upregulated under anaerobic conditions hinting to the production of acetoacetate. During anaerobic growth, protein acetylation increased significantly in the ackA mutant. Acetylation of several enzymes of glycolysis and central metabolism, of aspartate carbamoyl transferase, methionine synthase, catalase and of proteins involved in translation was increased. Supplementation of methionine and uracil eliminated the additional growth defect of the ackA mutant. The data show that anaerobic, fermentative growth of mutants in the AckA-Pta pathway is reduced but still possible. Growth reduction can be explained by the lack of an important ATP generating pathway of mixed acid fermentation. An ackA deletion mutant is more severely impaired than pta or ackA-pta deletion mutants. This is most probably due to the production of acetyl-P in the ackA mutant, leading to increased protein acetylation.

journal_name

Front Microbiol

authors

Schütze A,Benndorf D,Püttker S,Kohrs F,Bettenbrock K

doi

10.3389/fmicb.2020.00233

subject

Has Abstract

pub_date

2020-02-21 00:00:00

pages

233

issn

1664-302X

journal_volume

11

pub_type

杂志文章
  • No Assembly Required: Using BTyper3 to Assess the Congruency of a Proposed Taxonomic Framework for the Bacillus cereus Group With Historical Typing Methods.

    abstract::The Bacillus cereus group, also known as B. cereus sensu lato (s.l.), is a species complex comprising numerous closely related lineages, which vary in their ability to cause illness in humans and animals. The classification of B. cereus s.l. isolates into species-level taxonomic units is essential for facilitating com...

    journal_title:Frontiers in microbiology

    pub_type: 杂志文章

    doi:10.3389/fmicb.2020.580691

    authors: Carroll LM,Cheng RA,Kovac J

    更新日期:2020-09-22 00:00:00

  • Antimicrobial active herbal compounds against Acinetobacter baumannii and other pathogens.

    abstract::Bacterial pathogens cause a number of lethal diseases. Opportunistic bacterial pathogens grouped into ESKAPE pathogens that are linked to the high degree of morbidity, mortality and increased costs as described by Infectious Disease Society of America. Acinetobacter baumannii is one of the ESKAPE pathogens which cause...

    journal_title:Frontiers in microbiology

    pub_type: 杂志文章,评审

    doi:10.3389/fmicb.2015.00618

    authors: Tiwari V,Roy R,Tiwari M

    更新日期:2015-06-18 00:00:00

  • Extracellular vesicles from infected cells: potential for direct pathogenesis.

    abstract::Infections that result in natural or manmade spread of lethal biological agents are a concern and require national and focused preparedness. In this manuscript, as part of an early diagnostics and pathogen treatment strategy, we have focused on extracellular vesicles (EVs) that arise following infections. Although the...

    journal_title:Frontiers in microbiology

    pub_type: 杂志文章,评审

    doi:10.3389/fmicb.2015.01132

    authors: Schwab A,Meyering SS,Lepene B,Iordanskiy S,van Hoek ML,Hakami RM,Kashanchi F

    更新日期:2015-10-20 00:00:00

  • Human Gut Microbiota: Toward an Ecology of Disease.

    abstract::Composed of trillions of individual microbes, the human gut microbiota has adapted to the uniquely diverse environments found in the human intestine. Quickly responding to the variances in the ingested food, the microbiota interacts with the host via reciprocal biochemical signaling to coordinate the exchange of nutri...

    journal_title:Frontiers in microbiology

    pub_type: 杂志文章,评审

    doi:10.3389/fmicb.2017.01265

    authors: Selber-Hnatiw S,Rukundo B,Ahmadi M,Akoubi H,Al-Bizri H,Aliu AF,Ambeaghen TU,Avetisyan L,Bahar I,Baird A,Begum F,Ben Soussan H,Blondeau-Éthier V,Bordaries R,Bramwell H,Briggs A,Bui R,Carnevale M,Chancharoen M,Chevass

    更新日期:2017-07-17 00:00:00

  • Otitis Media Caused by V. cholerae O100: A Case Report and Review of the Literature.

    abstract::Infections due to Vibrio cholerae are rarely documented in Israel. Here we report a case of recurrent otitis media in a young male, caused by V. cholerae non-O1/O139. This extra-intestinal infection was caused by V. cholerae O100 and has been associated with freshwater exposure and travel. Symptoms of chronic periodic...

    journal_title:Frontiers in microbiology

    pub_type: 杂志文章

    doi:10.3389/fmicb.2017.01619

    authors: Kechker P,Senderovich Y,Ken-Dror S,Laviad-Shitrit S,Arakawa E,Halpern M

    更新日期:2017-08-28 00:00:00

  • ClubSub-P: Cluster-Based Subcellular Localization Prediction for Gram-Negative Bacteria and Archaea.

    abstract::The subcellular localization (SCL) of proteins provides important clues to their function in a cell. In our efforts to predict useful vaccine targets against Gram-negative bacteria, we noticed that misannotated start codons frequently lead to wrongly assigned SCLs. This and other problems in SCL prediction, such as th...

    journal_title:Frontiers in microbiology

    pub_type: 杂志文章

    doi:10.3389/fmicb.2011.00218

    authors: Paramasivam N,Linke D

    更新日期:2011-11-08 00:00:00

  • The Signatures of Natural Selection and Molecular Evolution in Fusarium graminearum Virus 1.

    abstract::Fusarium graminearum virus 1 (FgV1) is a positive-sense ssRNA virus that confers hypovirulence in its fungal host, Fusarium graminearum. Like most mycoviruses, FgV1 exists in fungal cells, lacks an extracellular life cycle, and is therefore transmitted during sporulation or hyphal anastomosis. To understand FgV1 evolu...

    journal_title:Frontiers in microbiology

    pub_type: 杂志文章

    doi:10.3389/fmicb.2020.600775

    authors: Heo JI,Yu J,Choi H,Kim KH

    更新日期:2020-11-12 00:00:00

  • The Nuclear-Localized RxLR Effector PvAvh74 From Plasmopara viticola Induces Cell Death and Immunity Responses in Nicotiana benthamiana.

    abstract::Downy mildew is one of the most serious diseases of grapevine (Vitis spp). The causal agent of grapevine downy mildew, Plasmopara viticola, is an obligate biotrophic oomycete. Although oomycete pathogens such as P. viticola are known to secrete RxLR effectors to manipulate host immunity, there have been few studies of...

    journal_title:Frontiers in microbiology

    pub_type: 杂志文章

    doi:10.3389/fmicb.2019.01531

    authors: Yin X,Shang B,Dou M,Liu R,Chen T,Xiang G,Li Y,Liu G,Xu Y

    更新日期:2019-07-10 00:00:00

  • Epidemiological Characteristics and Environmental Risk Factors of Severe Fever with Thrombocytopenia Syndrome in Hubei Province, China, from 2011 to 2016.

    abstract::Severe fever with thrombocytopenia syndrome (SFTS) is a tick-borne viral disease affecting hundreds of people in China each year. To better understand the epidemiological characteristics and environmental risk factors associated with the incidence of SFTS in Hubei Province, China, we conducted a retrospective epidemio...

    journal_title:Frontiers in microbiology

    pub_type: 杂志文章

    doi:10.3389/fmicb.2017.00387

    authors: Wang T,Li XL,Liu M,Song XJ,Zhang H,Wang YB,Tian BP,Xing XS,Li SY

    更新日期:2017-03-08 00:00:00

  • Genome-Wide Identification and Classification of Soybean C2H2 Zinc Finger Proteins and Their Expression Analysis in Legume-Rhizobium Symbiosis.

    abstract::Root nodule symbiosis (RNS) is one of the most productive and economical systems for nitrogen fixation, and previous studies have shown that several nodule-specific C2H2-zinc finger proteins (ZFPs) play important roles in symbiosis establishment and nodule function. However, C2H2-ZFPs are the most widespread ZFPs in e...

    journal_title:Frontiers in microbiology

    pub_type: 杂志文章

    doi:10.3389/fmicb.2018.00126

    authors: Yuan S,Li X,Li R,Wang L,Zhang C,Chen L,Hao Q,Zhang X,Chen H,Shan Z,Yang Z,Chen S,Qiu D,Ke D,Zhou X

    更新日期:2018-02-06 00:00:00

  • capB2 Expression Is Associated with Staphylococcus aureus Pathogenicity.

    abstract::CapB2 is recognized as a tyrosine kinase and is likely a vital factor in extracellular polysaccharide synthesis in Staphylococcus aureus, but its pathogenicity function and regulatory mechanism remain obscure. Here, we demonstrate that CapB2 enhances bacterial virulence in a murine model. Mice infected with the wild t...

    journal_title:Frontiers in microbiology

    pub_type: 杂志文章

    doi:10.3389/fmicb.2017.00184

    authors: Li D,Guo Y,Wang S,Lv J,Qi X,Chen Z,Han L,Zhang X,Wang L,Yu F

    更新日期:2017-02-10 00:00:00

  • Human Microbe-Disease Association Prediction With Graph Regularized Non-Negative Matrix Factorization.

    abstract::A microbe is a microscopic organism which may exists in its single-celled form or in a colony of cells. In recent years, accumulating researchers have been engaged in the field of uncovering microbe-disease associations since microbes are found to be closely related to the prevention, diagnosis, and treatment of many ...

    journal_title:Frontiers in microbiology

    pub_type: 杂志文章

    doi:10.3389/fmicb.2018.02560

    authors: He BS,Peng LH,Li Z

    更新日期:2018-11-01 00:00:00

  • The Biogeochemical Sulfur Cycle of Marine Sediments.

    abstract::Microbial dissimilatory sulfate reduction to sulfide is a predominant terminal pathway of organic matter mineralization in the anoxic seabed. Chemical or microbial oxidation of the produced sulfide establishes a complex network of pathways in the sulfur cycle, leading to intermediate sulfur species and partly back to ...

    journal_title:Frontiers in microbiology

    pub_type: 杂志文章,评审

    doi:10.3389/fmicb.2019.00849

    authors: Jørgensen BB,Findlay AJ,Pellerin A

    更新日期:2019-04-24 00:00:00

  • Changes in Microbiota Composition Along the Metamorphosis Developmental Stages of Chironomus transvaalensis.

    abstract::Chironomids (Diptera; Chironomidae), also known as non-biting midges, are one of the most abundant insects in freshwater habitats. Our aim was to understand whether the metamorphosis developmental stages affect the endogenous microbiota composition of Chironomus transvaalensis. Toward our objective, we analyzed the en...

    journal_title:Frontiers in microbiology

    pub_type: 杂志文章

    doi:10.3389/fmicb.2020.586678

    authors: Sela R,Laviad-Shitrit S,Halpern M

    更新日期:2020-11-06 00:00:00

  • Cell Wall Anchoring of the Campylobacter Antigens to Lactococcus lactis.

    abstract::Campylobacter jejuni is the most frequent cause of human food-borne gastroenteritis and chicken meat is the main source of infection. Recent studies showed that broiler chicken immunization against Campylobacter should be the most efficient way to lower the number of human infections by this pathogen. Induction of the...

    journal_title:Frontiers in microbiology

    pub_type: 杂志文章

    doi:10.3389/fmicb.2016.00165

    authors: Kobierecka PA,Olech B,Książek M,Derlatka K,Adamska I,Majewski PM,Jagusztyn-Krynicka EK,Wyszyńska AK

    更新日期:2016-02-18 00:00:00

  • Chemical Characteristics of Electron Shuttles Affect Extracellular Electron Transfer: Shewanella decolorationis NTOU1 Simultaneously Exploiting Acetate and Mediators.

    abstract::In the present study, we found that our isolate Shewanella decolorationis NTOU1 is able to degrade acetate under anaerobic condition with concomitant implementation of extracellular electron transfer (EET). With +0.63 V (vs. SHE) poised on the anode, in a 72-h experiment digesting acetate, only 2 mM acetate was consum...

    journal_title:Frontiers in microbiology

    pub_type: 杂志文章

    doi:10.3389/fmicb.2019.00399

    authors: Li SL,Wang YJ,Chen YC,Liu SM,Yu CP

    更新日期:2019-03-05 00:00:00

  • Yeast Biodiversity from DOQ Priorat Uninoculated Fermentations.

    abstract::Climate, soil, and grape varieties are the primary characteristics of terroir and lead to the definition of various appellations of origin. However, the microbiota associated with grapes are also affected by these conditions and can leave a footprint in a wine that will be part of the characteristics of terroir. Thus,...

    journal_title:Frontiers in microbiology

    pub_type: 杂志文章

    doi:10.3389/fmicb.2016.00930

    authors: Padilla B,García-Fernández D,González B,Izidoro I,Esteve-Zarzoso B,Beltran G,Mas A

    更新日期:2016-06-15 00:00:00

  • Distinctive Nuclear Localization Signals in the Oomycete Phytophthora sojae.

    abstract::To date, nuclear localization signals (NLSs) that target proteins to nuclei in oomycetes have not been defined, but have been assumed to be the same as in higher eukaryotes. Here, we use the soybean pathogen Phytophthora sojae as a model to investigate these sequences in oomycetes. By establishing a reliable in vivo N...

    journal_title:Frontiers in microbiology

    pub_type: 杂志文章

    doi:10.3389/fmicb.2017.00010

    authors: Fang Y,Jang HS,Watson GW,Wellappili DP,Tyler BM

    更新日期:2017-02-02 00:00:00

  • Elevated CO2 and Warming Altered Grassland Microbial Communities in Soil Top-Layers.

    abstract::As two central issues of global climate change, the continuous increase of both atmospheric CO2 concentrations and global temperature has profound effects on various terrestrial ecosystems. Microbial communities play pivotal roles in these ecosystems by responding to environmental changes through regulation of soil bi...

    journal_title:Frontiers in microbiology

    pub_type: 杂志文章

    doi:10.3389/fmicb.2018.01790

    authors: Yu H,Deng Y,He Z,Van Nostrand JD,Wang S,Jin D,Wang A,Wu L,Wang D,Tai X,Zhou J

    更新日期:2018-08-14 00:00:00

  • Anaerobic carboxydotrophic bacteria in geothermal springs identified using stable isotope probing.

    abstract::Carbon monoxide (CO) is a potential energy and carbon source for thermophilic bacteria in geothermal environments. Geothermal sites ranging in temperature from 45 to 65°C were investigated for the presence and activity of anaerobic CO-oxidizing bacteria. Anaerobic CO oxidation potentials were measured at up to 48.9 μm...

    journal_title:Frontiers in microbiology

    pub_type: 杂志文章

    doi:10.3389/fmicb.2015.00897

    authors: Brady AL,Sharp CE,Grasby SE,Dunfield PF

    更新日期:2015-09-01 00:00:00

  • Oxalic Acid Production in Clarireedia jacksonii Is Dictated by pH, Host Tissue, and Xylan.

    abstract::Dollar spot is caused by the fungus Clarireedia jacksonii and is the most common disease of golf course turfgrass in temperate climates. Oxalic acid (OA) is an important pathogenicity factor in other fungal plant pathogens, such as the dicot pathogen Sclerotinia sclerotiorum, but its role in C. jacksonii pathogenicity...

    journal_title:Frontiers in microbiology

    pub_type: 杂志文章

    doi:10.3389/fmicb.2020.01732

    authors: Townsend RV,Rioux RA,Kabbage M,Stephens C,Kerns JP,Koch P

    更新日期:2020-08-04 00:00:00

  • Comparative Analysis of Genetic Determinants Encoding Cadmium, Arsenic, and Benzalkonium Chloride Resistance in Listeria monocytogenes of Human, Food, and Environmental Origin.

    abstract::Environmental adaptation of Listeria monocytogenes is a complex process involving various mechanisms that can contribute to their survival in the environment, further spreading throughout the food chain and the development of listeriosis. The aim of this study was to analyze whole-genome sequencing data in a set of 27...

    journal_title:Frontiers in microbiology

    pub_type: 杂志文章

    doi:10.3389/fmicb.2020.599882

    authors: Gelbicova T,Florianova M,Hluchanova L,Kalova A,Korena K,Strakova N,Karpiskova R

    更新日期:2021-01-14 00:00:00

  • Dynamics in the Strawberry Rhizosphere Microbiome in Response to Biochar and Botrytis cinerea Leaf Infection.

    abstract::Adding biochar, the solid coproduct of biofuel production, to peat can enhance strawberry growth, and disease resistance against the airborne fungal pathogen Botrytis cinerea. Additionally, biochar can induce shifts in the strawberry rhizosphere microbiome. However, the moment that this biochar-mediated shift occurs i...

    journal_title:Frontiers in microbiology

    pub_type: 杂志文章

    doi:10.3389/fmicb.2016.02062

    authors: De Tender C,Haegeman A,Vandecasteele B,Clement L,Cremelie P,Dawyndt P,Maes M,Debode J

    更新日期:2016-12-22 00:00:00

  • Occurence of ArmA and RmtB Aminoglycoside Resistance 16S rRNA Methylases in Extended-Spectrum β-Lactamases Producing Escherichia coli in Algerian Hospitals.

    abstract::The aim of this study, was to characterize the extended-spectrum-β-lactamases (ESBLs) producing clinical strains of Escherichia coli isolated between January 2009 and June 2012 from Algerian hospitals and to determine the prevalence of 16S rRNA methylase among them. Sixty-seven ESBL-producers were detected among the 2...

    journal_title:Frontiers in microbiology

    pub_type: 杂志文章

    doi:10.3389/fmicb.2016.01409

    authors: Ayad A,Drissi M,de Curraize C,Dupont C,Hartmann A,Solanas S,Siebor E,Amoureux L,Neuwirth C

    更新日期:2016-09-12 00:00:00

  • A Prescription for Resistance: Management of Staphylococcal Skin Abscesses by General Practitioners in Australia.

    abstract:OBJECTIVES:We investigated the management of staphylococcal abscesses (boils) by general practitioners (GPs) in the context of rising antibiotic resistance in community strains of Staphylococcus aureus. DESIGN, SETTING, PARTICIPANTS:We analyzed patient-reported management of 66 cases of uncomplicated skin abscesses fr...

    journal_title:Frontiers in microbiology

    pub_type: 杂志文章

    doi:10.3389/fmicb.2016.00802

    authors: Parrott C,Wood G,Bogatyreva E,Coombs GW,Johnson PD,Bennett CM

    更新日期:2016-06-06 00:00:00

  • Proteomic Analysis Reveals a Biofilm-Like Behavior of Planktonic Aggregates of Staphylococcus epidermidis Grown Under Environmental Pressure/Stress.

    abstract::Prosthetic joint replacement failure has a huge impact on quality of life and hospitalization costs. A leading cause of prosthetic joint infection is bacteria-forming biofilm on the surface of orthopedic devices. Staphylococcus epidermidis is an emergent, low-virulence pathogen implicated in chronic infections, barely...

    journal_title:Frontiers in microbiology

    pub_type: 杂志文章

    doi:10.3389/fmicb.2019.01909

    authors: Bottagisio M,Soggiu A,Piras C,Bidossi A,Greco V,Pieroni L,Bonizzi L,Roncada P,Lovati AB

    更新日期:2019-09-06 00:00:00

  • Species-Level Analysis of Human Gut Microbiota With Metataxonomics.

    abstract::The current understanding of human gut microbial community is mainly limited to taxonomic features at the genus level. Here, we examined the human gut microbial community at the species level by metataxonomics. To achieve this purpose, a high-throughput approach involving operational phylogenetic unit analysis of the ...

    journal_title:Frontiers in microbiology

    pub_type: 杂志文章

    doi:10.3389/fmicb.2020.02029

    authors: Yang J,Pu J,Lu S,Bai X,Wu Y,Jin D,Cheng Y,Zhang G,Zhu W,Luo X,Rosselló-Móra R,Xu J

    更新日期:2020-08-26 00:00:00

  • Inhaled Liposomal Ciprofloxacin Protects against a Lethal Infection in a Murine Model of Pneumonic Plague.

    abstract::Inhalation of Yersinia pestis can lead to pneumonic plague, which without treatment is inevitably fatal. Two novel formulations of liposome-encapsulated ciprofloxacin, 'ciprofloxacin for inhalation' (CFI, Lipoquin®) and 'dual release ciprofloxacin for inhalation' (DRCFI, Pulmaquin®) containing CFI and ciprofloxacin so...

    journal_title:Frontiers in microbiology

    pub_type: 杂志文章

    doi:10.3389/fmicb.2017.00091

    authors: Hamblin KA,Armstrong SJ,Barnes KB,Davies C,Laws T,Blanchard JD,Harding SV,Atkins HS

    更新日期:2017-02-06 00:00:00

  • Tackling Multidrug Resistance in Streptococci - From Novel Biotherapeutic Strategies to Nanomedicines.

    abstract::The pyogenic streptococci group includes pathogenic species for humans and other animals and has been associated with enduring morbidity and high mortality. The main reason for the treatment failure of streptococcal infections is the increased resistance to antibiotics. In recent years, infectious diseases caused by p...

    journal_title:Frontiers in microbiology

    pub_type: 杂志文章,评审

    doi:10.3389/fmicb.2020.579916

    authors: Alves-Barroco C,Rivas-García L,Fernandes AR,Baptista PV

    更新日期:2020-10-06 00:00:00

  • Diversity and role of plasmids in adaptation of bacteria inhabiting the Lubin copper mine in Poland, an environment rich in heavy metals.

    abstract::The Lubin underground mine, is one of three mining divisions in the Lubin-Glogow Copper District in Lower Silesia province (Poland). It is the source of polymetallic ore that is rich in copper, silver and several heavy metals. Black shale is also significantly enriched in fossil organic matter in the form of long-chai...

    journal_title:Frontiers in microbiology

    pub_type: 杂志文章

    doi:10.3389/fmicb.2015.00152

    authors: Dziewit L,Pyzik A,Szuplewska M,Matlakowska R,Mielnicki S,Wibberg D,Schlüter A,Pühler A,Bartosik D

    更新日期:2015-03-03 00:00:00