Genomic Instability of iPSCs and Challenges in Their Clinical Applications.

Abstract:

:Generation of human-induced pluripotent stem cells (iPSCs) from somatic cells has opened the possibility to design novel therapeutic approaches. In 2014, the first-in-human clinical trial of iPSC-based therapy was conducted. However, the transplantation for the second patient was discontinued at least in part due to genetic aberrations detected in iPSCs. Moreover, many studies have reported genetic aberrations in iPSCs with the rapid progress in genomic technologies. The presence of genomic instability raises serious safety concerns and can hamper the advancement of iPSC-based therapies. Here, we summarize our current knowledge on genomic instability of iPSCs and challenges in their clinical applications. In view of the recent expansion of stem cell therapies, it is crucial to gain deeper mechanistic insights into the genetic aberrations, ranging from chromosomal aberrations, copy number variations to point mutations. On the basis of their origin, these genetic aberrations in iPSCs can be classified as (i) preexisting mutations in parental somatic cells, (ii) reprogramming-induced mutations, and (iii) mutations that arise during in vitro culture. However, it is still unknown whether these genetic aberrations in iPSCs can be an actual risk factor for adverse effects. Intersection of the genomic data on iPSCs with the patients' clinical follow-up data will help to produce evidence-based criteria for clinical application. Furthermore, we discuss novel approaches to generate iPSCs with fewer genetic aberrations. Better understanding of iPSCs from both basic and clinical aspects will pave the way for iPSC-based therapies.

journal_name

Adv Exp Med Biol

authors

Yoshihara M,Oguchi A,Murakawa Y

doi

10.1007/978-3-030-31206-0_2

subject

Has Abstract

pub_date

2019-01-01 00:00:00

pages

23-47

eissn

0065-2598

issn

2214-8019

journal_volume

1201

pub_type

杂志文章,评审
  • Cysteine peptidases of kinetoplastid parasites.

    abstract::We review Clan CA Family C1 peptidases of kinetoplastid parasites (Trypanosoma and Leishmania) with respect to biochemical and genetic diversity, genomic organization and stage-specificity and control of expression. We discuss their contributions to parasite metabolism, virulence and pathogenesis and modulation of the...

    journal_title:Advances in experimental medicine and biology

    pub_type: 杂志文章,评审

    doi:10.1007/978-1-4419-8414-2_6

    authors: Caffrey CR,Lima AP,Steverding D

    更新日期:2011-01-01 00:00:00

  • Severe hypoalphalipoproteinemia induced by a combination of probucol and clofibrate.

    abstract::Observation of a markedly depressed HDL-cholesterol (5 mg/dL) in a patient with familial hypercholesterolemia (FH) receiving probucol (1 g/day) and clofibrate (2 g/day) prompted a review of all cases treated by this combination at our lipid clinic. Hypoalphalipoproteinemia (HDL-C less than 15 mg/dL) developed in 19 of...

    journal_title:Advances in experimental medicine and biology

    pub_type: 杂志文章,评审

    doi:10.1007/978-1-4684-1262-8_11

    authors: Davignon J,Nestruck AC,Alaupovic P,Bouthillier D

    更新日期:1986-01-01 00:00:00

  • Preliminary characterization of a monoclonal antibody specific for a viral 27 kD glycoprotein family synthesized in porcine epidemic diarrhoea virus infected cells.

    abstract::We describe a new monoclonal antibody No. 204 (mcAb 204) which recognized a family of four polypeptides, consisting of a 27kD, a 24/23kD double band and a 19kD protein present within PEDV infected cell lysates. These proteins were identified by immunoprecipitation as well as by staining of immunoblots. In infected Ver...

    journal_title:Advances in experimental medicine and biology

    pub_type: 杂志文章

    doi:10.1007/978-1-4615-2996-5_31

    authors: Utiger A,Rosskopf M,Guscetti F,Ackermann M

    更新日期:1993-01-01 00:00:00

  • Possible roles for zinc in destruction of Trypanosoma cruzi by toxic oxygen metabolites produced by mononuclear phagocytes.

    abstract::The effects of a single nutrient deficiency on immune function is now most extensively characterized using the dietary zinc deficient murine model. Deficiencies in zinc have rapid adverse effects on host defenses of humans and rodents. This impaired defense seems to be, in part, the result of a reduction in number of ...

    journal_title:Advances in experimental medicine and biology

    pub_type: 杂志文章,评审

    doi:10.1007/978-1-4613-0553-8_10

    authors: Cook-Mills JM,Wirth JJ,Fraker PJ

    更新日期:1990-01-01 00:00:00

  • Histone deacetylases.

    abstract::Deacetylation of histones is required for gene regulation and cell cycle progression and the mediators, the histone deacetylases, are being vigorously pursued as drug targets for cancer chemotherapy. The deacetylases are also potential drug targets against infectious diseases and genome sequencing revealed proteins of...

    journal_title:Advances in experimental medicine and biology

    pub_type: 杂志文章,评审

    doi:10.1007/978-0-387-77570-8_7

    authors: Horn D

    更新日期:2008-01-01 00:00:00

  • Interface properties of simplified tear-like fluids in relation to lipid and aqueous layers composition.

    abstract::The Langmuir trough approach to the study of the physical properties of an in vitro system representing the natural tear lipid-aqueous interface gives useful information on the effect produced by changes of composition of both phases. We found that variations of the composition of the lipid mixture affect more strongl...

    journal_title:Advances in experimental medicine and biology

    pub_type: 杂志文章

    doi:10.1007/978-1-4615-0717-8_58

    authors: Miano F,Mazzone M,Giannetto A,Enea V,Mc Cauley P,Bailey A,Winlove PC

    更新日期:2002-01-01 00:00:00

  • Regulation of proteinase inhibitor genes in food plants.

    abstract::Proteinase inhibitor proteins in the families Solanaceae, Leguminosae and Graminae are stored in seeds and tubers and are also found to accumulate in leaves in response to pest attacks. The isolation of the proteinase Inhibitor I cDNA and its gene from tomato has provided information concerning proteinase inhibitor sy...

    journal_title:Advances in experimental medicine and biology

    pub_type: 杂志文章

    doi:10.1007/978-1-4757-0022-0_17

    authors: Brown WE,Graham JS,Lee JS,Ryan CA

    更新日期:1986-01-01 00:00:00

  • Lectin receptors and lectin resistance in chinese hamster ovary cells.

    abstract::Chinese hamster ovary (CHO) cells previously selected in a single-step for resistance to one or two different lectins and assigned to individual phenotypic groups on the basis of their unique patterns of lectin resistance, have been examined for their lectin-binding abilites. The lectin-binding parameters of CHO cells...

    journal_title:Advances in experimental medicine and biology

    pub_type: 杂志文章

    doi:10.1007/978-1-4684-3279-4_13

    authors: Stanley P,Carver JP

    更新日期:1977-01-01 00:00:00

  • Proteolytic processing of the MHV polymerase polyprotein. Identification of the P28 cleavage site and the adjacent protein, P65.

    abstract::The polymerase gene of Mouse Hepatitis Virus strain JHM (MHV-JHM) encodes a polyprotein larger than 750 kilodaltons. This polyprotein is proposed to be processed by several viral proteinases into functional subunits. The amino-terminal subunit is p28, which is cleaved by the first viral papain-like proteinase domain. ...

    journal_title:Advances in experimental medicine and biology

    pub_type: 杂志文章

    doi:

    authors: Dong S,Gao HQ,Baker SC

    更新日期:1995-01-01 00:00:00

  • Neuroprotective Effect of Taurine-Rich Cuttlefish (Sepia officinalis) Extract Against Hydrogen Peroxide-Induced Oxidative Stress in SH-SY5Y Cells.

    abstract::Oxidative stress mediates the cell damage in several neurodegenerative diseases, some of which are Alzheimer's disease (AD), multiple sclerosis and Parkinson's disease (PD). In this study, we investigated whether the taurine-rich cuttlefish extract could exert a protective effect on damaged human neuroblastoma SH-SY5Y...

    journal_title:Advances in experimental medicine and biology

    pub_type: 杂志文章

    doi:10.1007/978-94-024-1079-2_22

    authors: Kim YS,Kim EK,Hwang JW,Kim JS,Shin WB,Dong X,Nawarathna WPAS,Moon SH,Jeon BT,Park PJ

    更新日期:2017-01-01 00:00:00

  • A novel tumor suppressor, REIC/Dkk-3 gene identified by our in vitro transformation model of normal human fibroblasts works as a potent therapeutic anti-tumor agent.

    abstract::Reduced Expression in Immortalized Cell (REIC) was cloned by subtractive hybridization method as a gene whose expression is reduced in many human immortalized and neoplastic tumor cells. The REIC, when over-expressed by an adenovirus (Ad-REIC), exhibited a dramatic therapeutic effect on a wide variety of human cancers...

    journal_title:Advances in experimental medicine and biology

    pub_type: 杂志文章,评审

    doi:10.1007/978-1-4614-0254-1_17

    authors: Sakaguchi M,Huh NH,Namba M

    更新日期:2011-01-01 00:00:00

  • Iron Pathophysiology in Neurodegeneration with Brain Iron Accumulation.

    abstract::Neurodegeneration with brain iron accumulation (NBIA) is a group of seriously devastating and life-threatening rare monogenic diseases characterized by focal iron accumulation in the brain. The main symptoms of NBIA comprise progressive movement disorder, often including painful dystonia, parkinsonism, mental disabili...

    journal_title:Advances in experimental medicine and biology

    pub_type: 杂志文章,评审

    doi:10.1007/978-981-13-9589-5_9

    authors: Levi S,Cozzi A,Santambrogio P

    更新日期:2019-01-01 00:00:00

  • DNA Methylation and Gene Regulation in Honeybees: From Genome-Wide Analyses to Obligatory Epialleles.

    abstract::In contrast to heavily methylated mammalian genomes, invertebrate genomes are only sparsely methylated in a 'mosaic' fashion with the majority of methylated CpG dinucleotides found across gene bodies. Importantly, this gene body methylation is frequently associated with active transcription, and studies in the honeybe...

    journal_title:Advances in experimental medicine and biology

    pub_type: 杂志文章,评审

    doi:10.1007/978-3-319-43624-1_9

    authors: Wedd L,Maleszka R

    更新日期:2016-01-01 00:00:00

  • The genetic regulation of pigment cell development.

    abstract::Pigment cells in developing vertebrates are derived from a transient and pluripotent population of cells called neural crest. The neural crest delaminates from the developing neural tube and overlying ectoderm early in development. The pigment cells are the only derivative to migrate along the dorso-lateral pathway. A...

    journal_title:Advances in experimental medicine and biology

    pub_type: 杂志文章,评审

    doi:10.1007/978-0-387-46954-6_9

    authors: Silver DL,Hou L,Pavan WJ

    更新日期:2006-01-01 00:00:00

  • Estrogens influence growth, maturation, and amyloid beta-peptide production in neuroblastoma cells and in a beta-APP transfected kidney 293 cell line.

    abstract::During development in vivo and in vitro, estrogens: a) increase brain excitability, particularly in limbic structures; b) are responsible for the maturation and cyclicity of limbic-hypothalamic interrelations; c) enhance myelinogenesis; and d) may act with NGF to stimulate neurite formation. In senescence, estrogen ad...

    journal_title:Advances in experimental medicine and biology

    pub_type: 杂志文章

    doi:10.1007/978-1-4757-9551-6_19

    authors: Chang D,Kwan J,Timiras PS

    更新日期:1997-01-01 00:00:00

  • Effect of processing on Fusarium mycotoxins.

    abstract::Mycotoxins are secondary metabolites produced by a wide variety of fungal species that contaminate food or feed. Fumonisins (FUM), deoxynivalenol (DON) and zearalenone (ZEN) are examples of common mycotoxins in grains that have been shown to affect human and/or animal health. Physical, chemical and biological methods ...

    journal_title:Advances in experimental medicine and biology

    pub_type: 杂志文章,评审

    doi:10.1007/978-1-4615-4853-9_16

    authors: Jackson LS,Bullerman LB

    更新日期:1999-01-01 00:00:00

  • Homeosis and beyond. What is the function of the Hox genes?

    abstract::What is the function of the Hox genes? At first glance, it is a curious question. Indeed, the answer seems so obvious that several authors have spoken of 'the Hox function' about some of the Hox genes, namely Hox3/zen and Hox6/ftz that seem to have lost it during the evolution of Arthropods. What these authors meant i...

    journal_title:Advances in experimental medicine and biology

    pub_type: 杂志文章,评审

    doi:10.1007/978-1-4419-6673-5_12

    authors: Deutsch JS

    更新日期:2010-01-01 00:00:00

  • Readily Releasable Stores of Calcium in Neuronal Endolysosomes: Physiological and Pathophysiological Relevance.

    abstract::Neurons are long-lived post-mitotic cells that possess an elaborate system of endosomes and lysosomes (endolysosomes) for protein quality control. Relatively recently, endolysosomes were recognized to contain high concentrations (400-600 μM) of readily releasable calcium. The release of calcium from this acidic organe...

    journal_title:Advances in experimental medicine and biology

    pub_type: 杂志文章,评审

    doi:10.1007/978-3-030-12457-1_27

    authors: Lakpa KL,Halcrow PW,Chen X,Geiger JD

    更新日期:2020-01-01 00:00:00

  • Role of Tumor Specific niche in Colon Cancer Progression and Emerging Therapies by Targeting Tumor Microenvironment.

    abstract::Colorectal cancer is the third most common form of cancer worldwide leading to escalating mortality rates and mainly includes hereditary, sporadic and colitis-associated cancer development. The escalated mortality rates is due to the limited treatment options as this form of cancer is usually not easy to diagnose in i...

    journal_title:Advances in experimental medicine and biology

    pub_type: 杂志文章

    doi:10.1007/5584_2019_355

    authors: Banerjee A,Chabria Y,Kanna N R R,Gopi J,Rowlo P,Sun XF,Pathak S

    更新日期:2019-04-11 00:00:00

  • Adiponectin-Resistance in Obesity.

    abstract::The decrease in adiponectin levels are negatively correlated with chronic subclinical inflammation markers in obesity. The hypertrophic adipocytes cause obesity-linked insulin resistance and metabolic syndrome. Furthermore, macrophage polarization is a key determinant regulating adiponectin receptor (AdipoR1/R2) expre...

    journal_title:Advances in experimental medicine and biology

    pub_type: 杂志文章,评审

    doi:10.1007/978-3-319-48382-5_18

    authors: Engin A

    更新日期:2017-01-01 00:00:00

  • Darwin, microbes and evolution by natural selection.

    abstract::Born 200 years ago, Darwin's revolutionary ideas were derived largely from his observations on life forms that evolved relatively recently, including various flowering plants, worms, birds and domesticated animals. Yet, life appeared on planet earth close to 4 billion years ago in the form of unicellular organisms col...

    journal_title:Advances in experimental medicine and biology

    pub_type: 历史文章,杂志文章

    doi:10.1007/978-1-4419-7185-2_6

    authors: Moxon ER

    更新日期:2011-01-01 00:00:00

  • Functional oxygen-17 magnetic resonance imaging and localized spectroscopy.

    abstract::Functional oxygen-17 magnetic resonance (MR) imaging and localized spectroscopy is defined as the ensemble of MR measurements aiming at in vivo, noninvasive characterization of oxygen transport and utilization. After a brief description of the present status of in vivo 17O-MR, preliminary results are reported on oxyge...

    journal_title:Advances in experimental medicine and biology

    pub_type: 杂志文章

    doi:10.1007/978-1-4615-0205-0_35

    authors: Mateescu GD

    更新日期:2003-01-01 00:00:00

  • Isolation and purification of fumonisin B1 and B2 from rice culture.

    abstract::Procedures are presented for growing Fusarium moniliforme MRC 826 on rice, separation of fumonisin B1 (FB1) from fumonisin B2 (FB2), purification of FB1 and preliminary procedures for purification of FB2. The mycotoxins were extracted from rice culture material (RCM) with acetonitrile-water (1:1), filtered, and the ac...

    journal_title:Advances in experimental medicine and biology

    pub_type: 杂志文章

    doi:10.1007/978-1-4899-1379-1_10

    authors: Meredith FI,Bacon CW,Norred WP,Plattner RD

    更新日期:1996-01-01 00:00:00

  • Allergic Contact Dermatitis: A Model of Inflammatory Itch and Pain in Human and Mouse.

    abstract::This chapter is an overview of published observations from our laboratory on the psychophysics and neurobiology of the persistent itch and pain of allergic contact dermatitis (ACD). ACD is a clinically significant problem with many features characteristic of other pruritic disorders. Our approach was to produce ACD ex...

    journal_title:Advances in experimental medicine and biology

    pub_type: 杂志文章

    doi:10.1007/978-94-017-7537-3_2

    authors: LaMotte RH

    更新日期:2016-01-01 00:00:00

  • RPPA: Origins, Transition to a Validated Clinical Research Tool, and Next Generations of the Technology.

    abstract::RPPA technology has graduated from a research tool to an essential component of clinical drug discovery research and personalized medicine. Next generations of RPPA technology will be a single clinical instrument that integrates all the steps of the workflow. ...

    journal_title:Advances in experimental medicine and biology

    pub_type: 杂志文章

    doi:10.1007/978-981-32-9755-5_1

    authors: Petricoin E 3rd,Wulfkuhle J,Howard M,Pierobon M,Espina V,Luchini A,Liotta LA

    更新日期:2019-01-01 00:00:00

  • Taxonomy of Yersinia pestis.

    abstract::This chapter summarized the taxonomy and typing works of Yersinia pestis since it's firstly identified in Hong Kong in 1894. Phenotyping methods that based on phenotypic characteristics, including biotyping, serotyping, antibiogram analysis, bacteriocin typing, phage typing, and plasmid typing, were firstly applied in...

    journal_title:Advances in experimental medicine and biology

    pub_type: 杂志文章,评审

    doi:10.1007/978-94-024-0890-4_3

    authors: Qi Z,Cui Y,Zhang Q,Yang R

    更新日期:2016-01-01 00:00:00

  • The Role of Epigenomics in the Study of Cancer Biomarkers and in the Development of Diagnostic Tools.

    abstract::Epigenetics plays a key role in cancer development. Genetics alone cannot explain sporadic cancer and cancer development in individuals with no family history or a weak family history of cancer. Epigenetics provides a mechanism to explain the development of cancer in such situations. Alterations in epigenetic profilin...

    journal_title:Advances in experimental medicine and biology

    pub_type: 杂志文章,评审

    doi:10.1007/978-94-017-7215-0_5

    authors: Verma M

    更新日期:2015-01-01 00:00:00

  • Noise Impact on European Sea Bass Behavior: Temporal Structure Matters.

    abstract::Anthropogenic sounds come in different forms, varying not only in amplitude and frequency spectrum but also in temporal structure. Although fish are sensitive to the temporal characteristics of sound, little is known about how their behavior is affected by anthropogenic sounds of different temporal patterns. We invest...

    journal_title:Advances in experimental medicine and biology

    pub_type: 杂志文章

    doi:10.1007/978-1-4939-2981-8_93

    authors: Neo YY,Seitz J,Kastelein RA,Winter HV,Cate CT,Slabbekoorn H

    更新日期:2016-01-01 00:00:00

  • On the seemingly diminished CO2-Bohr effect in hypoxic chemodenervated rabbits.

    abstract::In hypoxic rabbits, different levels of Pco2 before and after carotid chemodenervation were applied in order to get information about the acid-base status and the position of the O2-Hb dissociation curve (ODC). A CO2-induced change in pH caused a smaller change in the half-saturation pressure (P50) than was to be expe...

    journal_title:Advances in experimental medicine and biology

    pub_type: 杂志文章

    doi:10.1007/978-1-4684-1188-1_10

    authors: Kiwull-Schöne H,Gärtner B,Kiwull P

    更新日期:1984-01-01 00:00:00

  • Neuropeptide biology in Drosophila.

    abstract::Drosophila melanogaster is since decades the most important invertebrate model. With the publishing of the genome sequence, Drosophila also became a pioneer in (neuro)peptide research. Neuropeptides represent a major group of signaling molecules that outnumber all other types of neurotransmitters/modulators and hormon...

    journal_title:Advances in experimental medicine and biology

    pub_type: 杂志文章,评审

    doi:10.1007/978-1-4419-6902-6_10

    authors: Clynen E,Reumer A,Baggerman G,Mertens I,Schoofs L

    更新日期:2010-01-01 00:00:00