Exoelectrogenic capacity of host microbiota predicts lymphocyte recruitment to the gut.

Abstract:

:Electrotaxis, directional cell movement in response to an electric potential, has been demonstrated in a wide range of cell types including lymphocytes. Exoelectrogens, microorganisms capable of generating electrical currents, have been identified in microbial fuel cells. However, no studies have investigated exoelectrogenic microbes in fresh feces or the effects of an exoelectrogenic microbiota on the host organism. Here we show that commensal gut microbial populations differ in their capacity for electrical current production by exoelectrogens and that those differences are predictive of increased lymphocyte trafficking to the gut in vivo, despite the lack of increased production of canonical lymphocyte-specific chemokines. Additionally, we demonstrate that the difference in current production between mice purchased from different commercial sources correlates reproducibly with the presence or absence of segmented filamentous bacteria, and while our data do not support a direct role for segmented filamentous bacteria in ex vivo current production, an exoelectrogenic microbiota can be transferred in vivo via mucosa-associated bacteria present in the ileum. Moreover, we detect upregulation of microbial genes associated with extracellular electron transfer in feces of mice colonized with exoelectrogenic microbiota containing segmented filamentous bacteria. While still correlative, these results suggest a novel means by which the gut microbiota modulates the recruitment of cells of the immune system to the gut.

journal_name

Physiol Genomics

journal_title

Physiological genomics

authors

Ericsson AC,Davis DJ,Franklin CL,Hagan CE

doi

10.1152/physiolgenomics.00010.2015

subject

Has Abstract

pub_date

2015-07-01 00:00:00

pages

243-52

issue

7

eissn

1094-8341

issn

1531-2267

pii

physiolgenomics.00010.2015

journal_volume

47

pub_type

杂志文章
  • Liver gene expression analysis reveals endoplasmic reticulum stress and metabolic dysfunction in SCD1-deficient mice fed a very low-fat diet.

    abstract::We previously reported that mice deficient in stearoyl-CoA desaturase-1 (Scd1) and maintained on a very low-fat (VLF) diet for 10 days developed severe loss of body weight, hypoglycemia, hypercholesterolemia, and many cholestasis-like phenotypes. To better understand the metabolic changes associated with these phenoty...

    journal_title:Physiological genomics

    pub_type: 杂志文章

    doi:10.1152/physiolgenomics.00139.2007

    authors: Flowers MT,Keller MP,Choi Y,Lan H,Kendziorski C,Ntambi JM,Attie AD

    更新日期:2008-05-13 00:00:00

  • SERCA2a superinhibition by human phospholamban triggers electrical and structural remodeling in mouse hearts.

    abstract::Phospholamban (PLN), the reversible inhibitor of the sarco(endo)plasmic reticulum Ca(2+)-ATPase (SERCA2a), is a key regulator of myocyte Ca(2+) cycling with a significant role in heart failure. We previously showed that the single amino acid difference between human and mouse PLN results in increased inhibition of Ca(...

    journal_title:Physiological genomics

    pub_type: 杂志文章

    doi:10.1152/physiolgenomics.00032.2010

    authors: Wang HS,Arvanitis DA,Dong M,Niklewski PJ,Zhao W,Lam CK,Kranias EG,Sanoudou D

    更新日期:2011-04-12 00:00:00

  • Knockin mice with Leu9'Ser alpha4-nicotinic receptors: substantia nigra dopaminergic neurons are hypersensitive to agonist and lost postnatally.

    abstract::This study analyzes the electrophysiological cause and behavioral consequence of dopaminergic cell loss in a knockin mouse strain bearing hypersensitive nicotinic alpha4-receptor subunits ("L9'S mice"). Adult brains of L9'S mice show moderate loss of substantia nigra dopaminergic neurons and of striatal dopaminergic i...

    journal_title:Physiological genomics

    pub_type: 杂志文章

    doi:10.1152/physiolgenomics.00012.2004

    authors: Orb S,Wieacker J,Labarca C,Fonck C,Lester HA,Schwarz J

    更新日期:2004-08-11 00:00:00

  • Gene expression effects of lithium and valproic acid in a serotonergic cell line.

    abstract::Valproic acid (VPA) and lithium are widely used in the treatment of bipolar disorder. However, the underlying mechanism of action of these drugs is not clearly understood. We used RNA-Seq analysis to examine the global profile of gene expression in a rat serotonergic cell line (RN46A) after exposure to these two mood ...

    journal_title:Physiological genomics

    pub_type: 杂志文章

    doi:10.1152/physiolgenomics.00069.2018

    authors: Balasubramanian D,Pearson JF,Kennedy MA

    更新日期:2019-02-01 00:00:00

  • MicroRNAs in normal and psoriatic skin.

    abstract::Psoriasis is a chronic and common human skin disorder currently with no cure. Psoriatic skin displays inflammatory, raised, and scaly lesions with widely aberrant gene expression. Recent studies have revealed critical roles that microRNAs play as a class of posttranscriptional gene regulator in skin development and sk...

    journal_title:Physiological genomics

    pub_type: 杂志文章,评审

    doi:10.1152/physiolgenomics.00157.2013

    authors: Xia J,Zhang W

    更新日期:2014-02-15 00:00:00

  • Development and testing of a high-density cDNA microarray resource for cattle.

    abstract::A cDNA microarray resource has been developed with the goal of providing integrated functional genomics resources for cattle. The National Bovine Functional Genomics Consortium's (NBFGC) expressed sequence tag (EST) collection was established in 2001 to develop resources for functional genomics research. The NBFGC EST...

    journal_title:Physiological genomics

    pub_type: 杂志文章

    doi:10.1152/physiolgenomics.00094.2003

    authors: Suchyta SP,Sipkovsky S,Kruska R,Jeffers A,McNulty A,Coussens MJ,Tempelman RJ,Halgren RG,Saama PM,Bauman DE,Boisclair YR,Burton JL,Collier RJ,DePeters EJ,Ferris TA,Lucy MC,McGuire MA,Medrano JF,Overton TR,Smith TP,

    更新日期:2003-10-17 00:00:00

  • Identification of new targets of Drosophila pre-mRNA adenosine deaminase.

    abstract::Adenosine deaminase acting on RNA (ADAR) in Drosophila and mammals has recently become the target of numerous investigations. It is now clear that this protein has a number of functions in the nervous system. Indeed, the mutation of ADAR in Drosophila (dADAR) results in many pathological and physiological changes, suc...

    journal_title:Physiological genomics

    pub_type: 杂志文章

    doi:10.1152/physiolgenomics.00093.2003

    authors: Xia S,Yang J,Su Y,Qian J,Ma E,Haddad GG

    更新日期:2005-01-20 00:00:00

  • Strain-dependent pulmonary gene expression profiles of a cystic fibrosis mouse model.

    abstract::Cystic fibrosis (CF) lung disease severity is influenced by unknown genetic factors apart from the disease causative gene, cystic fibrosis transmembrane conductance regulator (CFTR). Previous studies have shown the C57BL/6J congenic Cftr(-/-) (B6 CF) mouse to develop a fibrotic lung disease compared with both CF mice ...

    journal_title:Physiological genomics

    pub_type: 杂志文章

    doi:10.1152/physiolgenomics.00208.2005

    authors: Haston CK,Cory S,Lafontaine L,Dorion G,Hallett MT

    更新日期:2006-04-13 00:00:00

  • Vertical selection for nuclear and mitochondrial genomes shapes gut microbiota and modifies risks for complex diseases.

    abstract::Here we postulate that the heritability of complex disease traits previously ascribed solely to the inheritance of the nuclear and mitochondrial genomes is broadened to encompass a third component of the holobiome, the microbiome. To test this, we expanded on the selectively bred low capacity runner/high capacity runn...

    journal_title:Physiological genomics

    pub_type: 杂志文章

    doi:10.1152/physiolgenomics.00089.2019

    authors: Zhang Y,Kumarasamy S,Mell B,Cheng X,Morgan EE,Britton SL,Vijay-Kumar M,Koch LG,Joe B

    更新日期:2020-01-01 00:00:00

  • Transcriptional atlas of cardiogenesis maps congenital heart disease interactome.

    abstract::Mammalian heart development is built on highly conserved molecular mechanisms with polygenetic perturbations resulting in a spectrum of congenital heart diseases (CHD). However, knowledge of cardiogenic ontogeny that regulates proper cardiogenesis remains largely based on candidate-gene approaches. Mapping the dynamic...

    journal_title:Physiological genomics

    pub_type: 杂志文章

    doi:10.1152/physiolgenomics.00015.2014

    authors: Li X,Martinez-Fernandez A,Hartjes KA,Kocher JP,Olson TM,Terzic A,Nelson TJ

    更新日期:2014-07-01 00:00:00

  • Alternative promoter usage and alternative splicing contribute to mRNA heterogeneity of mouse monocarboxylate transporter 2.

    abstract::Expression patterns of monocarboxylate transporter 2 (MCT2) display mRNA diversity in a tissue-specific fashion. We cloned and characterized multiple mct2 5'-cDNA ends from the mouse and determined the structural organization of the mct2 gene. We found that transcription of this gene was initiated from five independen...

    journal_title:Physiological genomics

    pub_type: 杂志文章

    doi:10.1152/physiolgenomics.00192.2007

    authors: Zhang SX,Searcy TR,Wu Y,Gozal D,Wang Y

    更新日期:2007-12-19 00:00:00

  • Suppression subtractive hybridization analysis of low-protein diet- and vitamin D-induced gene expression from rat kidney inner medullary base.

    abstract::Protein restriction and hypercalcemia result in a urinary concentrating defect in rats and humans. Previous tubular perfusion studies show that there is an increased active urea transport activity in the initial inner medullary (IM) collecting duct in low-protein diet (LPD) and vitamin D (Vit D) animal models. To inve...

    journal_title:Physiological genomics

    pub_type: 杂志文章

    doi:10.1152/physiolgenomics.00129.2009

    authors: Chen G,Yang Y,Fröhlich O,Klein JD,Sands JM

    更新日期:2010-05-01 00:00:00

  • Changes in global gene expression in rat myometrium in transition from late pregnancy to parturition.

    abstract::The process of parturition involves the complex interplay of factors that change the excitability and contractile activity of the uterus. We have compared the relative gene expression profile of myometrium from rats before parturition (21 days pregnant) and during delivery, using high-density DNA microarray. Of 8,740 ...

    journal_title:Physiological genomics

    pub_type: 杂志文章

    doi:10.1152/physiolgenomics.00290.2007

    authors: Helguera G,Eghbali M,Sforza D,Minosyan TY,Toro L,Stefani E

    更新日期:2009-01-08 00:00:00

  • Gene homology resources on the World Wide Web.

    abstract::As the amount of information available to biologists increases exponentially, data analysis becomes progressively more challenging. Sequence homology has been a traditional tool in the researchers' armamentarium; it is a very versatile instrument and can be employed to assist in numerous tasks, from establishing the f...

    journal_title:Physiological genomics

    pub_type: 杂志文章,评审

    doi:10.1152/physiolgenomics.00112.2002

    authors: Turchin A,Kohane IS

    更新日期:2002-12-03 00:00:00

  • Ammonia excretion in rainbow trout (Oncorhynchus mykiss): evidence for Rh glycoprotein and H+-ATPase involvement.

    abstract::Branchial ammonia transport in freshwater teleosts is not well understood. Most studies conclude that NH(3) diffuses out of the gill and becomes protonated to NH(4)(+) in an acidified gill boundary layer. Rhesus (Rh) proteins are new members of the ammonia transporter superfamily and rainbow trout possess genes encodi...

    journal_title:Physiological genomics

    pub_type: 杂志文章

    doi:10.1152/physiolgenomics.00061.2007

    authors: Nawata CM,Hung CC,Tsui TK,Wilson JM,Wright PA,Wood CM

    更新日期:2007-11-14 00:00:00

  • Localization of a blood pressure QTL on rat chromosome 1 using Dahl rat congenic strains.

    abstract::We previously reported that markers on rat chromosome 1 are genetically linked to blood pressure in an F(2) population derived from Dahl salt hypertension-sensitive (S) and Lewis (LEW) rats. Because there was evidence for more than one blood pressure quantitative trait locus (QTL) on chromosome 1, an initial congenic ...

    journal_title:Physiological genomics

    pub_type: 杂志文章

    doi:10.1152/physiolgenomics.1999.1.3.119

    authors: Saad Y,Garrett MR,Lee SJ,Dene H,Rapp JP

    更新日期:1999-11-11 00:00:00

  • Evaluation of hypothalamic gene expression in mice divergently selected for heat loss.

    abstract::Mouse lines divergently selected for heat loss were evaluated for correlated responses in the hypothalamic transcriptome. High (MH) heat loss mice have approximately 50% greater heat loss, approximately 35% less body fat, approximately 20% greater feed intake, approximately 100% greater locomotor activity levels, and ...

    journal_title:Physiological genomics

    pub_type: 杂志文章

    doi:10.1152/physiolgenomics.00184.2002

    authors: Wesolowski SR,Allan MF,Nielsen MK,Pomp D

    更新日期:2003-04-16 00:00:00

  • Identification and characterization of a novel member of the ATP-sensitive K+ channel subunit family, Kir6.3, in zebrafish.

    abstract::ATP-sensitive K+ (KATP) channels play a crucial role in coupling cellular metabolism to membrane potential. In addition to the orthologs corresponding to Kir6.1 and Kir6.2 of mammals, we have identified a novel member, designated Kir6.3 (zKir6.3), of the inward rectifier K+ channel subfamily Kir6.x in zebrafish. zKir6...

    journal_title:Physiological genomics

    pub_type: 杂志文章

    doi:10.1152/physiolgenomics.00228.2005

    authors: Zhang C,Miki T,Shibasaki T,Yokokura M,Saraya A,Seino S

    更新日期:2006-02-14 00:00:00

  • Genome reprogramming in Saccharomyces cerevisiae upon nonylphenol exposure.

    abstract::Bioaccumulative environmental estrogen, nonylphenol (NP; 4-nonylphenol), is widely used as a nonionic surfactant and can affect human health. Since genomes of Saccharomyces cerevisiae and higher eukaryotes share many structural and functional similarities, we investigated subcellular effects of NP on S. cerevisiae BY4...

    journal_title:Physiological genomics

    pub_type: 杂志文章

    doi:10.1152/physiolgenomics.00034.2017

    authors: Bereketoglu C,Arga KY,Eraslan S,Mertoglu B

    更新日期:2017-10-01 00:00:00

  • Iron-related transcriptomic variations in CaCo-2 cells, an in vitro model of intestinal absorptive cells.

    abstract::Regulation of iron absorption by duodenal enterocytes is essential for the maintenance of homeostasis by preventing iron deficiency or overload. Despite the identification of a number of genes implicated in iron absorption and its regulation, it is likely that further factors remain to be identified. For that purpose,...

    journal_title:Physiological genomics

    pub_type: 杂志文章

    doi:10.1152/physiolgenomics.00297.2005

    authors: Chicault C,Toutain B,Monnier A,Aubry M,Fergelot P,Le Treut A,Galibert MD,Mosser J

    更新日期:2006-06-16 00:00:00

  • Functional meta-analysis of double connectivity in gene coexpression networks in mammals.

    abstract::In functional genomics, the high-throughput methods such as microarrays 1) allow analysis of the relationships between genes considering them as elements of a network and 2) lead to biological interpretations thanks to Gene Ontology. But up to now it has not been possible to find relationships between the functions an...

    journal_title:Physiological genomics

    pub_type: 杂志文章,meta分析

    doi:10.1152/physiolgenomics.00008.2008

    authors: Gustin MP,Paultre CZ,Randon J,Bricca G,Cerutti C

    更新日期:2008-06-12 00:00:00

  • In vivo measurement of lung volumes in mice.

    abstract::We describe longitudinal measurements of functional residual capacity (FRC) in breathing mice using a clinical computed tomography (CT) scanner. Lungs of anesthetized mice from the A/J and C3H/HeJ strains were scanned over a 10-s period. Using a fixed threshold for CT density, we could accurately and reproducibly obta...

    journal_title:Physiological genomics

    pub_type: 杂志文章

    doi:10.1152/physiolgenomics.2001.4.3.215

    authors: Mitzner W,Brown R,Lee W

    更新日期:2001-01-19 00:00:00

  • Reciprocal backcross mice confirm major loci linked to hyperoxic acute lung injury survival time.

    abstract::Morbidity and mortality associated with acute lung injury (ALI) and acute respiratory distress syndrome remain substantial. Although many candidate genes have been tested, a clear understanding of the pathogenesis is lacking, as is our ability to predict individual outcome. Because ALI is a complex disease, single gen...

    journal_title:Physiological genomics

    pub_type: 杂志文章

    doi:10.1152/physiolgenomics.90392.2008

    authors: Prows DR,Winterberg AV,Gibbons WJ Jr,Burzynski BB,Liu C,Nick TG

    更新日期:2009-07-09 00:00:00

  • Proinflammatory phenotype of coronary arteries promotes endothelial apoptosis in aging.

    abstract::Previously we demonstrated that aging in coronary arteries is associated with proinflammatory phenotypic changes and decreased NO bioavailability, which, we hypothesized, promotes vascular disease by enhancing endothelial apoptosis. To test this hypothesis we characterized proapoptotic alterations in the phenotype of ...

    journal_title:Physiological genomics

    pub_type: 杂志文章

    doi:10.1152/physiolgenomics.00136.2003

    authors: Csiszar A,Ungvari Z,Koller A,Edwards JG,Kaley G

    更新日期:2004-03-12 00:00:00

  • Global deletion of BCATm increases expression of skeletal muscle genes associated with protein turnover.

    abstract::Consumption of a protein-containing meal by a fasted animal promotes protein accretion in skeletal muscle, in part through leucine stimulation of protein synthesis and indirectly through repression of protein degradation mediated by its metabolite, α-ketoisocaproate. Mice lacking the mitochondrial branched-chain amino...

    journal_title:Physiological genomics

    pub_type: 杂志文章

    doi:10.1152/physiolgenomics.00055.2015

    authors: Lynch CJ,Kimball SR,Xu Y,Salzberg AC,Kawasawa YI

    更新日期:2015-11-01 00:00:00

  • Gene expression in ductus arteriosus and aorta: comparison of birth and oxygen effects.

    abstract::Ductus arteriosus (DA) closure is initiated by oxygen rise postnatally and progresses in two, functional-to-permanent, stages. Here, using GeneChip Arrays in rats (normoxic and hyperoxic fetus, normoxic newborn), we examined whether oxygen alone duplicates the birth process in affecting DA genes. In addition, by compa...

    journal_title:Physiological genomics

    pub_type: 杂志文章

    doi:10.1152/physiolgenomics.00231.2005

    authors: Costa M,Barogi S,Socci ND,Angeloni D,Maffei M,Baragatti B,Chiellini C,Grasso E,Coceani F

    更新日期:2006-04-13 00:00:00

  • Comprehensive transthoracic cardiac imaging in mice using ultrasound biomicroscopy with anatomical confirmation by magnetic resonance imaging.

    abstract::High-frequency ultrasound biomicroscopy (UBM) has recently emerged as a high-resolution means of phenotyping genetically altered mice and has great potential to evaluate the cardiac morphology and hemodynamics of mouse mutants. However, there is no standard procedure of in vivo transthoracic cardiac imaging using UBM ...

    journal_title:Physiological genomics

    pub_type: 杂志文章

    doi:10.1152/physiolgenomics.00026.2004

    authors: Zhou YQ,Foster FS,Nieman BJ,Davidson L,Chen XJ,Henkelman RM

    更新日期:2004-07-08 00:00:00

  • A mini review: Proteomics approaches to understand disused vs. exercised human skeletal muscle.

    abstract::Immobilization, bed rest, or denervation leads to muscle disuse and subsequent skeletal muscle atrophy. Muscle atrophy can also occur as a component of various chronic diseases such as cancer, AIDS, sepsis, diabetes, and chronic heart failure or as a direct result of genetic muscle disorders. In addition to this atrop...

    journal_title:Physiological genomics

    pub_type: 杂志文章,评审

    doi:10.1152/physiolgenomics.00043.2018

    authors: Cho Y,Ross RS

    更新日期:2018-09-01 00:00:00

  • Hepatic gene expression in herbivores on diets with natural and novel plant secondary compounds.

    abstract::Herbivores are predicted to evolve appropriate mechanisms to process the plant secondary compounds (PSCs) in their diet, and these mechanisms are likely specific to particular suites of PSCs. Changes in diet composition over evolutionary time should select for appropriate alterations in metabolism of the more recent d...

    journal_title:Physiological genomics

    pub_type: 杂志文章

    doi:10.1152/physiolgenomics.00033.2013

    authors: Magnanou E,Malenke JR,Dearing MD

    更新日期:2013-09-03 00:00:00

  • Proteomic profiling of nuclei from native renal inner medullary collecting duct cells using LC-MS/MS.

    abstract::Vasopressin is a peptide hormone that regulates renal water excretion in part through its actions on the collecting duct. The regulation occurs in part via control of transcription of genes coding for the water channels aquaporin-2 (Aqp2) and aquaporin-3 (Aqp3). To identify transcription factors expressed in collectin...

    journal_title:Physiological genomics

    pub_type: 杂志文章

    doi:10.1152/physiolgenomics.00148.2009

    authors: Tchapyjnikov D,Li Y,Pisitkun T,Hoffert JD,Yu MJ,Knepper MA

    更新日期:2010-02-04 00:00:00