Automatic segmentation of scaling in 2-D psoriasis skin images.

Abstract:

:Psoriasis is a chronic inflammatory skin disease that affects over 3% of the population. Various methods are currently used to evaluate psoriasis severity and to monitor therapeutic response. The PASI system of scoring is widely used for evaluating psoriasis severity. It employs a visual analogue scale to score the thickness, redness (erythema), and scaling of psoriasis lesions. However, PASI scores are subjective and suffer from poor inter- and intra-observer concordance. As an integral part of developing a reliable evaluation method for psoriasis, an algorithm is presented for segmenting scaling in 2-D digital images. The algorithm is believed to be the first to localize scaling directly in 2-D digital images. The scaling segmentation problem is treated as a classification and parameter estimation problem. A Markov random field (MRF) is used to smooth a pixel-wise classification from a support vector machine (SVM) that utilizes a feature space derived from image color and scaling texture. The training sets for the SVM are collected directly from the image being analyzed giving the algorithm more resilience to variations in lighting and skin type. The algorithm is shown to give reliable segmentation results when evaluated with images with different lighting conditions, skin types, and psoriasis types.

journal_name

IEEE Trans Med Imaging

authors

Lu J,Kazmierczak E,Manton JH,Sinclair R

doi

10.1109/TMI.2012.2236349

subject

Has Abstract

pub_date

2013-04-01 00:00:00

pages

719-30

issue

4

eissn

0278-0062

issn

1558-254X

journal_volume

32

pub_type

杂志文章
  • Improved watershed transform for medical image segmentation using prior information.

    abstract::The watershed transform has interesting properties that make it useful for many different image segmentation applications: it is simple and intuitive, can be parallelized, and always produces a complete division of the image. However, when applied to medical image analysis, it has important drawbacks (oversegmentation...

    journal_title:IEEE transactions on medical imaging

    pub_type: 杂志文章

    doi:10.1109/TMI.2004.824224

    authors: Grau V,Mewes AU,Alcañiz M,Kikinis R,Warfield SK

    更新日期:2004-04-01 00:00:00

  • Computer-assisted scan protocol and reconstruction (CASPAR)-reduction of image noise and patient dose.

    abstract::X-ray computed tomography is a powerful medical imaging device. It allows high-resolution 3-D visualization of the human body. However, one drawback is the health risk associated with ionizing radiation. Simply downscaling the radiation intensities over the entire scan results in increased quantum noise. This paper pr...

    journal_title:IEEE transactions on medical imaging

    pub_type: 杂志文章

    doi:10.1109/TMI.2009.2034515

    authors: Sperl J,Beque D,Claus B,De Man B,Senzig B,Brokate M

    更新日期:2010-03-01 00:00:00

  • Artifact trapping during time reversal photoacoustic imaging for acoustically heterogeneous media.

    abstract::Several different reconstruction algorithms have been proposed for photoacoustic tomography, most of which presuppose that the acoustic properties of the medium are constant and homogeneous. In practice, there are often unknown spatial variations in the acoustic properties, and these algorithms give, at best, only app...

    journal_title:IEEE transactions on medical imaging

    pub_type: 杂志文章

    doi:10.1109/TMI.2009.2032358

    authors: Cox BT,Treeby BE

    更新日期:2010-02-01 00:00:00

  • A Tensor B-Spline Approach for Solving the Diffusion PDE With Application to Optical Diffusion Tomography.

    abstract::Optical Diffusion Tomography (ODT) is a modern non-invasive medical imaging modality which requires mathematical modelling of near-infrared light propagation in tissue. Solving the ODT forward problem equation accurately and efficiently is crucial. Typically, the forward problem is represented by a Diffusion PDE and i...

    journal_title:IEEE transactions on medical imaging

    pub_type: 杂志文章

    doi:10.1109/TMI.2016.2641500

    authors: Shulga D,Morozov O,Hunziker P

    更新日期:2017-04-01 00:00:00

  • Quantification of MR brain images by mixture density and partial volume modeling.

    abstract::The problem of automatic quantification of brain tissue by utilizing single-valued (single echo) magnetic resonance imaging (MRI) brain scans is addressed. It is shown that this problem can be solved without classification or segmentation, a method that may be particularly useful in quantifying white matter lesions wh...

    journal_title:IEEE transactions on medical imaging

    pub_type: 杂志文章

    doi:10.1109/42.241885

    authors: Santago P,Gage HD

    更新日期:1993-01-01 00:00:00

  • Hybrid feature-based diffeomorphic registration for tumor tracking in 2-D liver ultrasound images.

    abstract::Real-time ultrasound image acquisition is a pivotal resource in the medical community, in spite of its limited image quality. This poses challenges to image registration methods, particularly to those driven by intensity values. We address these difficulties in a novel diffeomorphic registration technique for tumor tr...

    journal_title:IEEE transactions on medical imaging

    pub_type: 杂志文章

    doi:10.1109/TMI.2013.2262055

    authors: Cifor A,Risser L,Chung D,Anderson EM,Schnabel JA

    更新日期:2013-09-01 00:00:00

  • Simultaneous Estimation of Corneal Topography, Pachymetry, and Curvature.

    abstract::Identification of objective criteria to correctly diagnose ectatic diseases of the cornea or to detect early stages of corneal ectasia is of great interest in ophthalmology and optometry. Metrics for diagnosis typically employed are curvature maps (axial/sagittal, tangential); elevation map of the anterior surface of ...

    journal_title:IEEE transactions on medical imaging

    pub_type: 杂志文章

    doi:10.1109/TMI.2018.2836304

    authors: Nasrin F,Iyer RV,Mathews SM

    更新日期:2018-11-01 00:00:00

  • Blind color decomposition of histological images.

    abstract::Cancer diagnosis is based on visual examination under a microscope of tissue sections from biopsies. But whereas pathologists rely on tissue stains to identify morphological features, automated tissue recognition using color is fraught with problems that stem from image intensity variations due to variations in tissue...

    journal_title:IEEE transactions on medical imaging

    pub_type: 杂志文章

    doi:10.1109/TMI.2013.2239655

    authors: Gavrilovic M,Azar JC,Lindblad J,Wahlby C,Bengtsson E,Busch C,Carlbom IB

    更新日期:2013-06-01 00:00:00

  • Automated segmentation of multiple sclerosis lesions by model outlier detection.

    abstract::This paper presents a fully automated algorithm for segmentation of multiple sclerosis (MS) lesions from multispectral magnetic resonance (MR) images. The method performs intensity-based tissue classification using a stochastic model for normal brain images and simultaneously detects MS lesions as outliers that are no...

    journal_title:IEEE transactions on medical imaging

    pub_type: 杂志文章

    doi:10.1109/42.938237

    authors: Van Leemput K,Maes F,Vandermeulen D,Colchester A,Suetens P

    更新日期:2001-08-01 00:00:00

  • Computation of the mid-sagittal plane in 3-D brain images.

    abstract::We present a new method to automatically compute, reorient, and recenter the mid-sagittal plane in anatomical and functional three-dimensional (3-D) brain images. This iterative approach is composed of two steps. At first, given an initial guess of the mid-sagittal plane (generally, the central plane of the image grid...

    journal_title:IEEE transactions on medical imaging

    pub_type: 杂志文章

    doi:10.1109/42.993131

    authors: Prima S,Ourselin S,Ayache N

    更新日期:2002-02-01 00:00:00

  • 3-D reconstruction of tissue components for atherosclerotic human arteries using ex vivo high-resolution MRI.

    abstract::Automatic computer-based methods are well suited for the image analysis of the different components in atherosclerotic plaques. Although several groups work on such analysis some of the methods used are oversimplified and require improvements when used within a computational framework for predicting meaningful stress ...

    journal_title:IEEE transactions on medical imaging

    pub_type: 杂志文章

    doi:10.1109/TMI.2006.870485

    authors: Auer M,Stollberger R,Regitnig P,Ebner F,Holzapfel GA

    更新日期:2006-03-01 00:00:00

  • Quantifying the statistical impact of GRAPPA in fcMRI data with a real-valued isomorphism.

    abstract::The interpolation of missing spatial frequencies through the generalized auto-calibrating partially parallel acquisitions (GRAPPA) parallel magnetic resonance imaging (MRI) model implies a correlation is induced between the acquired and reconstructed frequency measurements. As the parallel image reconstruction algorit...

    journal_title:IEEE transactions on medical imaging

    pub_type: 杂志文章

    doi:10.1109/TMI.2013.2288521

    authors: Bruce IP,Rowe DB

    更新日期:2014-02-01 00:00:00

  • CA-Net: Comprehensive Attention Convolutional Neural Networks for Explainable Medical Image Segmentation.

    abstract::Accurate medical image segmentation is essential for diagnosis and treatment planning of diseases. Convolutional Neural Networks (CNNs) have achieved state-of-the-art performance for automatic medical image segmentation. However, they are still challenged by complicated conditions where the segmentation target has lar...

    journal_title:IEEE transactions on medical imaging

    pub_type: 杂志文章

    doi:10.1109/TMI.2020.3035253

    authors: Gu R,Wang G,Song T,Huang R,Aertsen M,Deprest J,Ourselin S,Vercauteren T,Zhang S

    更新日期:2020-11-02 00:00:00

  • Neuron Segmentation With High-Level Biological Priors.

    abstract::We present a novel approach to the problem of neuron segmentation in image volumes acquired by an electron microscopy. Existing methods, such as agglomerative or correlation clustering, rely solely on boundary evidence and have problems where such an evidence is lacking (e.g., incomplete staining) or ambiguous (e.g., ...

    journal_title:IEEE transactions on medical imaging

    pub_type: 杂志文章

    doi:10.1109/TMI.2017.2712360

    authors: Krasowski NE,Beier T,Knott GW,Kothe U,Hamprecht FA,Kreshuk A

    更新日期:2018-04-01 00:00:00

  • Quantitative evaluation of atherosclerosis using Doppler ultrasound.

    abstract::During the last two decades, various Doppler methods have been successfully used to screen patients with significant cerebral and peripheral vascular disease. In general terms, the principal advantages of Doppler ultrasound techniques in the evaluation of atherosclerotic lesions are that they: 1) are noninvasive, 2) a...

    journal_title:IEEE transactions on medical imaging

    pub_type: 杂志文章

    doi:10.1109/TMI.1982.4307550

    authors: Greene ER,Eldridge MW,Voyles WF,Miranda FG,Davis JG

    更新日期:1982-01-01 00:00:00

  • A Predictive Model of Vertebral Trabecular Anisotropy From Ex Vivo Micro-CT.

    abstract::Spine-related disorders are amongst the most frequently encountered problems in clinical medicine. For several applications such as 1) to improve the assessment of the strength of the spine, as well as 2) to optimize the personalization of spinal interventions, image-based biomechanical modeling of the vertebrae is ex...

    journal_title:IEEE transactions on medical imaging

    pub_type: 杂志文章

    doi:10.1109/TMI.2014.2387114

    authors: Lekadir K,Hoogendoorn C,Hazrati-Marangalou J,Taylor Z,Noble C,van Rietbergen B,Frangi AF

    更新日期:2015-08-01 00:00:00

  • Noninvasive Reconstruction of Transmural Transmembrane Potential With Simultaneous Estimation of Prior Model Error.

    abstract::To reconstruct electrical activity in the heart from body-surface electrocardiograms (ECGs) is an ill-posed inverse problem. Electrophysiological models have been found effective in regularizing these inverse problems by incorporating a priori knowledge about how the electrical potential in the heart propagates over t...

    journal_title:IEEE transactions on medical imaging

    pub_type: 杂志文章

    doi:10.1109/TMI.2019.2906600

    authors: Ghimire S,Sapp JL,Horacek BM,Wang L

    更新日期:2019-11-01 00:00:00

  • Motion-compensated and gated cone beam filtered back-projection for 3-D rotational X-ray angiography.

    abstract::This paper presents a method to reconstruct moving objects from cone beam X-ray projections acquired during a single rotational run using a given motion vector field. The method is applicable to voxel driven cone-beam filtered back-projection reconstruction approaches. Here, a formulation based on the algorithm of Fel...

    journal_title:IEEE transactions on medical imaging

    pub_type: 杂志文章

    doi:10.1109/tmi.2006.876147

    authors: Schäfer D,Borgert J,Rasche V,Grass M

    更新日期:2006-07-01 00:00:00

  • The hypervolume under the ROC hypersurface of "near-guessing" and "near-perfect" observers in N-class classification tasks.

    abstract::We express the performance of the N-class "guessing" observer in terms of the N2-N conditional probabilities which make up an N-class receiver operating characteristic (ROC) space, in a formulation in which sensitivities are eliminated in constructing the ROC space (equivalent to using false-negative fraction and fals...

    journal_title:IEEE transactions on medical imaging

    pub_type: 杂志文章

    doi:10.1109/tmi.2004.841227

    authors: Edwards DC,Metz CE,Nishikawa RM

    更新日期:2005-03-01 00:00:00

  • Computer-aided stereotactic functional neurosurgery enhanced by the use of the multiple brain atlas database.

    abstract::This paper introduces a computer-aided atlas-based functional neurosurgery methodology and describes NeuroPlanner, a software system which supports it. NeuroPlanner provides four groups of functions: 1) data-related for data reading, interpolation, reformatting, and image processing; 2) atlas-related for multiple atla...

    journal_title:IEEE transactions on medical imaging

    pub_type: 信件

    doi:10.1109/42.832961

    authors: Nowinski WL,Yang GL,Yeo TT

    更新日期:2000-01-01 00:00:00

  • Improved Contrast-Enhanced Power Doppler Using a Coherence-Based Estimator.

    abstract::While plane-wave imaging can improve the performance of power Doppler by enabling much longer ensembles than systems using focused beams, the long-ensemble averaging of the zero-lag autocorrelation R(0) estimates does not directly decrease the mean noise level, but only decreases its variance. Spatial variation of the...

    journal_title:IEEE transactions on medical imaging

    pub_type: 杂志文章

    doi:10.1109/TMI.2017.2699672

    authors: Tremblay-Darveau C,Bar-Zion A,Williams R,Sheeran PS,Milot L,Loupas T,Adam D,Bruce M,Burns PN

    更新日期:2017-09-01 00:00:00

  • Accurate event-driven motion compensation in high-resolution PET incorporating scattered and random events.

    abstract::With continuing improvements in spatial resolution of positron emission tomography (PET) scanners, small patient movements during PET imaging become a significant source of resolution degradation. This work develops and investigates a comprehensive formalism for accurate motion-compensated reconstruction which at the ...

    journal_title:IEEE transactions on medical imaging

    pub_type: 杂志文章

    doi:10.1109/TMI.2008.917248

    authors: Rahmim A,Dinelle K,Cheng JC,Shilov MA,Segars WP,Lidstone SC,Blinder S,Rousset OG,Vajihollahi H,Tsui BM,Wong DF,Sossi V

    更新日期:2008-08-01 00:00:00

  • Estimating CT Image From MRI Data Using Structured Random Forest and Auto-Context Model.

    abstract::Computed tomography (CT) imaging is an essential tool in various clinical diagnoses and radiotherapy treatment planning. Since CT image intensities are directly related to positron emission tomography (PET) attenuation coefficients, they are indispensable for attenuation correction (AC) of the PET images. However, due...

    journal_title:IEEE transactions on medical imaging

    pub_type: 杂志文章

    doi:10.1109/TMI.2015.2461533

    authors: Huynh T,Gao Y,Kang J,Wang L,Zhang P,Lian J,Shen D,Alzheimer's Disease Neuroimaging Initiative.

    更新日期:2016-01-01 00:00:00

  • Low-Rank Atlas Image Analyses in the Presence of Pathologies.

    abstract::We present a common framework, for registering images to an atlas and for forming an unbiased atlas, that tolerates the presence of pathologies such as tumors and traumatic brain injury lesions. This common framework is particularly useful when a sufficient number of protocol-matched scans from healthy subjects cannot...

    journal_title:IEEE transactions on medical imaging

    pub_type: 杂志文章

    doi:10.1109/TMI.2015.2448556

    authors: Liu X,Niethammer M,Kwitt R,Singh N,McCormick M,Aylward S

    更新日期:2015-12-01 00:00:00

  • Fast and Accurate Rat Head Motion Tracking With Point Sources for Awake Brain PET.

    abstract::To avoid the confounding effects of anesthesia and immobilization stress in rat brain positron emission tomography (PET), motion tracking-based unrestrained awake rat brain imaging is being developed. In this paper, we propose a fast and accurate rat headmotion tracking method based on small PET point sources. PET poi...

    journal_title:IEEE transactions on medical imaging

    pub_type: 杂志文章

    doi:10.1109/TMI.2017.2667889

    authors: Miranda A,Staelens S,Stroobants S,Verhaeghe J

    更新日期:2017-07-01 00:00:00

  • Video-Rate Ring-Array Ultrasound and Photoacoustic Tomography.

    abstract::Ultrasonography and photoacoustic tomography provide complementary contrasts in preclinical studies, disease diagnoses, and imaging-guided interventional procedures. Here, we present a video-rate (20 Hz) dual-modality ultrasound and photoacoustic tomographic platform that has a high resolution, rich contrasts, deep pe...

    journal_title:IEEE transactions on medical imaging

    pub_type: 杂志文章

    doi:10.1109/TMI.2020.3017815

    authors: Zhang Y,Wang L

    更新日期:2020-12-01 00:00:00

  • Spatiotemporal forward solution of the EEG and MEG using network modeling.

    abstract::Dynamic systems have proven to be well suited to describe a broad spectrum of human coordination behavior such synchronization with auditory stimuli. Simultaneous measurements of the spatiotemporal dynamics of electroencephalographic (EEG) and magnetoencephalographic (MEG) data reveals that the dynamics of the brain s...

    journal_title:IEEE transactions on medical imaging

    pub_type: 杂志文章

    doi:10.1109/TMI.2002.1009385

    authors: Jirsa VK,Jantzen KJ,Fuchs A,Kelso JA

    更新日期:2002-05-01 00:00:00

  • Graph-based IVUS segmentation with efficient computer-aided refinement.

    abstract::A new graph-based approach for segmentation of luminal and external elastic lamina (EEL) surface of coronary vessels in gated 20 MHz intravascular ultrasound (IVUS) image sequences (volumes) is presented. The approach consists of a fully automated segmentation stage ("new automated" or NA) and a user-guided computer-a...

    journal_title:IEEE transactions on medical imaging

    pub_type: 杂志文章

    doi:10.1109/TMI.2013.2260763

    authors: Sun S,Sonka M,Beichel RR

    更新日期:2013-08-01 00:00:00

  • Parameter relations for the Shinnar-Le Roux selective excitation pulse design algorithm [NMR imaging].

    abstract::An overview of the Shinnar-Le Roux (SLR) algorithm is presented. It is shown how the performance of SLR pulses can be very accurately specified analytically. This reveals how to design a pulse that produces a specified slice profile and allows the pulse designer to trade off analytically the parameters describing the ...

    journal_title:IEEE transactions on medical imaging

    pub_type: 杂志文章

    doi:10.1109/42.75611

    authors: Pauly J,Le Roux P,Nishimura D,Macovski A

    更新日期:1991-01-01 00:00:00

  • Spatially adaptive mixture modeling for analysis of FMRI time series.

    abstract::Within-subject analysis in fMRI essentially addresses two problems, the detection of brain regions eliciting evoked activity and the estimation of the underlying dynamics. In Makni et aL, 2005 and Makni et aL, 2008, a detection-estimation framework has been proposed to tackle these problems jointly, since they are con...

    journal_title:IEEE transactions on medical imaging

    pub_type: 杂志文章

    doi:10.1109/TMI.2010.2042064

    authors: Vincent T,Risser L,Ciuciu P

    更新日期:2010-04-01 00:00:00