pH-induced conformational states of bovine growth hormone.

Abstract:

:The folding behavior of bovine growth hormone (bGH) is examined by chemical and pH denaturation using several spectroscopic probes of protein secondary and tertiary structure. Partially denaturing concentrations of urea eliminate the native-state quenching of intrinsic tryptophan fluorescence, from the single protein tryptophan, but the fluorescence emission spectrum is not red-shifted like the unfolded state, and the protein retains substantial secondary structure. A neutral-to-acid pH shift also eliminates tryptophan quenching; however, the loss of quenching is not accompanied by an emission red-shift. In addition, the protein undergoes a pH-dependent UV absorbance transition; the changes in absorptivity have the same midpoint as the transition associated with the change in intrinsic tryptophan fluorescence. The magnitude of the absorption transition is similar to that observed previously for urea denaturation of the protein. In a similar fashion, a pH-dependent CD transition is also observed; however, the transition occurs at a higher pH. The behavior of the various optical probes indicates that the pH-induced conformational transition produces a highly populated species in which the microenvironment surrounding the single protein tryptophan residue resembles that observed during the urea-induced unfolding/refolding transition. The pH-induced changes in tertiary structure occur at a lower pH than the changes associated with a portion of the secondary structure. Proton NMR of the low-pH intermediate indicates that the three His and six Tyr resonances are indistinguishable from the unfolded state. The intermediate(s) observed by either chemical or pH-induced denaturation resemble(s) a molten globule state which contains significant secondary structure. The residual secondary structure present in the intermediate could be nonnative.(ABSTRACT TRUNCATED AT 250 WORDS)

journal_name

Biochemistry

journal_title

Biochemistry

authors

Holzman TF,Dougherty JJ Jr,Brems DN,MacKenzie NE

doi

10.1021/bi00457a022

subject

Has Abstract

pub_date

1990-02-06 00:00:00

pages

1255-61

issue

5

eissn

0006-2960

issn

1520-4995

journal_volume

29

pub_type

杂志文章
  • An unusually low pK(a) for Cys282 in the active site of human muscle creatine kinase.

    abstract::All phosphagen kinases contain a conserved cysteine residue which has been shown by crystallographic studies, on both creatine kinase and arginine kinase, to be located in the active site. There are conflicting reports as to whether this cysteine is essential for catalysis. In this study we have used site-directed mut...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi011208f

    authors: Wang PF,McLeish MJ,Kneen MM,Lee G,Kenyon GL

    更新日期:2001-10-02 00:00:00

  • Protoheme-carbon monoxide geminate kinetics.

    abstract::Recombination kinetics of CO to protoheme after laser photolysis have been measured vs. temperature and viscosity. A 25-ns laser pulse was focused on the sample to produce an excitation rate of 10(9)/s per heme. This temporarily populates the heme-CO state of dissociated pairs which either separate or recombine on a p...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi00358a008

    authors: Marden MC,Hazard ES 3rd,Gibson QH

    更新日期:1986-05-20 00:00:00

  • Purification of bovine thymus cytosolic C-terminal Src kinase (CSK) and demonstration of differential efficiencies of phosphorylation and inactivation of p56lyn and pp60c-src by CSK.

    abstract::The C-terminal src kinase (CSK) is a ubiquitously expressed, cytosolic enzyme capable of phosphorylating and inactivating several plasma membrane-bound src-family protein tyrosine kinases in vitro [Nada, S., Okada, M., MacAuley, A., Cooper, J.A., & Nakagawa, H. (1990) Nature 351, 69-72; Bergman, M., Mustelin, T., Oetk...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi9603940

    authors: Cheng HC,Bjorge JD,Aebersold R,Fujita DJ,Wang JH

    更新日期:1996-09-10 00:00:00

  • Protected sulfur transfer reactions by the Escherichia coli Suf system.

    abstract::The first step in sulfur mobilization for the biosynthesis of Fe-S clusters under oxidative stress and iron starvation in Escherichia coli involves a cysteine desulfurase SufS. Its catalytic reactivity is dependent on the presence of a sulfur acceptor protein, SufE, which acts as the preferred substrate for this enzym...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi4001479

    authors: Selbach BP,Pradhan PK,Dos Santos PC

    更新日期:2013-06-11 00:00:00

  • Replacement of a conserved proline and the alkaline conformational change in iso-2-cytochrome c.

    abstract::Although point mutations usually lead to minor localized changes in protein structure, replacement of conserved Pro-76 with Gly in iso-2-cytochrome c induces a major conformational change. The change in structure results from mutation-induced depression of the pK for transition to an alkaline conformation with altered...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi00451a043

    authors: Nall BT,Zuniga EH,White TB,Wood LC,Ramdas L

    更新日期:1989-12-12 00:00:00

  • Engineering of fibroblast growth factor: alteration of receptor binding specificity.

    abstract::A five-residue loop structure in basic fibroblast growth factor (FGF-2) which extends from amino acid residue 118 to residue 122 was replaced, by cassette mutagenesis, with the corresponding seven-residue loop structure from the structural homologue acidic fibroblast growth factor (FGF-1) or the corresponding five-res...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi00003a004

    authors: Seddon AP,Aviezer D,Li LY,Böhlen P,Yayon A

    更新日期:1995-01-24 00:00:00

  • Engineering the substrate binding site of benzoylformate decarboxylase.

    abstract::Benzoylformate decarboxylase (BFDC) and pyruvate decarboxylase (PDC) are both thiamin diphosphate-dependent enzymes. The two share a common three-dimensional structure and catalyze a similar chemical reaction, i.e., decarboxylation of 2-keto acids. However, they vary significantly in their substrate utilization patter...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi9008402

    authors: Yep A,McLeish MJ

    更新日期:2009-09-08 00:00:00

  • Activator-dependent preinduction binding of sigma-70 RNA polymerase at the metal-regulated mer promoter.

    abstract::Expression of the Tn21 mercury-resistance (mer) locus is controlled by the merR gene product, which represses mer structural gene (merTPCAD) transcription in the absence of mercuric ion [Hg(II)] and activates it in the presence of Hg(II). In vivo DNA methylation of the mer regulatory region (merOP) shows that, with or...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi00493a011

    authors: Heltzel A,Lee IW,Totis PA,Summers AO

    更新日期:1990-10-16 00:00:00

  • Kinetic mechanism of the GCN5-related chromosomal aminoglycoside acetyltransferase AAC(6')-Ii from Enterococcus faecium: evidence of dimer subunit cooperativity.

    abstract::The aminoglycoside 6'-N-acetyltransferase AAC(6')-Ii from Enterococcus faecium is an important microbial resistance determinant and a member of the GCN5-related N-acetyltransferase (GNAT) superfamily. We report here the further characterization of this enzyme in terms of the kinetic mechanism of acetyl transfer and id...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi034148h

    authors: Draker KA,Northrop DB,Wright GD

    更新日期:2003-06-03 00:00:00

  • Determination of the extent of DNA bending by an adenine-thymine tract.

    abstract::We determined the magnitude of the bend induced in DNA by an adenine-thymine tract by measuring the rate of cyclization of DNA oligonucleotides containing phased A tracts. A series of linear multimers with 2-bp single-stranded ends, in which the (A.T)6 tracts are separated by CG2-3C sequences and are positioned 10 and...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi00469a027

    authors: Koo HS,Drak J,Rice JA,Crothers DM

    更新日期:1990-05-01 00:00:00

  • Anthrax toxin receptor 1/tumor endothelial marker 8: mutation of conserved inserted domain residues overrides cytosolic control of protective antigen binding.

    abstract::Anthrax toxin receptor 1 (ANTXR1)/tumor endothelial marker 8 (TEM8) is one of two known proteinaceous cell surface anthrax toxin receptors. A metal ion dependent adhesion site (MIDAS) present in the integrin-like inserted (I) domain of ANTXR1 mediates the binding of the anthrax toxin subunit, protective antigen (PA). ...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi100887w

    authors: Ramey JD,Villareal VA,Ng C,Ward SC,Xiong JP,Clubb RT,Bradley KA

    更新日期:2010-08-31 00:00:00

  • Specific RNA binding by Q beta coat protein.

    abstract::The interaction between the bacteriophage Q beta coat protein and its specific binding site on Q beta genomic RNA was characterized by using a nitrocellulose filter binding assay. Q beta coat protein bound to a synthetic 29-nucleotide RNA hairpin with an association constant of 400 microM-1 at 4 degrees C, 0.2 M ionic...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi00427a011

    authors: Witherell GW,Uhlenbeck OC

    更新日期:1989-01-10 00:00:00

  • Hydrophobic helical hairpins: design and packing interactions in membrane environments.

    abstract::Helix-helix interactions within membranes are dominated by van der Waals packing motifs and side chain-side chain hydrogen bond formation, which act in tandem to determine the residues that comprise the interface between two given helices. To explore in a systematic manner the tertiary contacts between transmembrane h...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi0492760

    authors: Johnson RM,Heslop CL,Deber CM

    更新日期:2004-11-16 00:00:00

  • DNA topoisomerase I-mediated formation of structurally modified DNA duplexes. Effects of metal ions and topoisomerase I inhibitors.

    abstract::The ability of DNA topoisomerase I to mediate the formation of structurally modified DNA duplexes was studied utilizing suicide substrates containing high-efficiency cleavage sites and acceptor oligonucleotides in which the 5'-terminal nucleotides were varied. When the substrates were nicked duplexes, the divalent cat...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi972707c

    authors: Wang X,Henningfeld KA,Hecht SM

    更新日期:1998-02-24 00:00:00

  • Slow binding inhibition of S-adenosylmethionine synthetase by imidophosphate analogues of an intermediate and product.

    abstract::S-Adenosylmethionine (AdoMet) synthetase catalyzes the only known route of biosynthesis of the primary in vivo alkylating agent. Inhibitors of this enzyme could provide useful modifiers of biological methylation and polyamine biosynthetic processes. The AdoMet synthetase catalyzed reaction converts ATP and L-methionin...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi990528k

    authors: Reczkowski RS,Markham GD

    更新日期:1999-07-13 00:00:00

  • Flip-flop is slow and rate limiting for the movement of long chain anthroyloxy fatty acids across lipid vesicles.

    abstract::An issue that is central to understanding cellular fatty acid (FA) metabolism is whether physiologic transport of FA across cell membranes requires protein mediation or can be satisfied by the rate of spontaneous movement through the lipid phase. For this reason, considerable effort has been devoted to determining the...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi962007s

    authors: Kleinfeld AM,Chu P,Storch J

    更新日期:1997-05-13 00:00:00

  • Human type-alpha transforming growth factor undergoes slow conformational exchange between multiple backbone conformations as characterized by nitrogen-15 relaxation measurements.

    abstract::Human type-alpha transforming growth factor (hTGF alpha) is a small mitogenic protein containing 50 amino acids and three disulfide bonds. It has both sequence and structural homology with epidermal growth factor (EGF). While the three-dimensional structures of hTGF alpha and other EGF-like proteins have been studied ...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi00008a003

    authors: Li YC,Montelione GT

    更新日期:1995-02-28 00:00:00

  • Cooperative binding of R17 coat protein to RNA.

    abstract::The binding of the R17 coat protein to synthetic RNAs containing one or two coat protein binding sites was characterized by using nitrocellulose filter and gel-retention assays. RNAs with two available sites bound coat protein in a cooperative manner, resulting in a higher affinity and reduced sensitivity to pH, ionic...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi00502a006

    authors: Witherell GW,Wu HN,Uhlenbeck OC

    更新日期:1990-12-18 00:00:00

  • Properties of Intermediates in the Catalytic Cycle of Oxalate Oxidoreductase and Its Suicide Inactivation by Pyruvate.

    abstract::Oxalate:ferredoxin oxidoreductase (OOR) is an unusual member of the thiamine pyrophosphate (TPP)-dependent 2-oxoacid:ferredoxin oxidoreductase (OFOR) family in that it catalyzes the coenzyme A (CoA)-independent conversion of oxalate into 2 equivalents of carbon dioxide. This reaction is surprising because binding of C...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/acs.biochem.7b00222

    authors: Pierce E,Mansoorabadi SO,Can M,Reed GH,Ragsdale SW

    更新日期:2017-06-06 00:00:00

  • Transient-state kinetics of the ADP-insensitive phosphoenzyme in sarcoplasmic reticulum: implications for transient-state calcium translocation.

    abstract::The kinetics of formation of the ADP-sensitive (EP) and ADP-insensitive (E*P) phosphoenzyme intermediates of the CaATPase in sarcoplasmic reticulum (SR) were investigated by means of the quenched-flow technique. At 21 degrees C, addition of saturating ADP to SR vesicles phosphorylated for 116 ms with 10 microM ATP gav...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi00322a018

    authors: Froehlich JP,Heller PF

    更新日期:1985-01-01 00:00:00

  • Unique conformer selection of human growth-regulatory lectin galectin-1 for ganglioside GM1 versus bacterial toxins.

    abstract::Endogenous lectins induce effects on cell growth by binding to antennae of natural glycoconjugates. These complex carbohydrates often present more than one potential lectin-binding site in a single chain. Using the growth-regulatory interaction of the pentasaccharide of ganglioside GM(1) with homodimeric galectin-1 on...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi035477c

    authors: Siebert HC,André S,Lu SY,Frank M,Kaltner H,van Kuik JA,Korchagina EY,Bovin N,Tajkhorshid E,Kaptein R,Vliegenthart JF,von der Lieth CW,Jiménez-Barbero J,Kopitz J,Gabius HJ

    更新日期:2003-12-23 00:00:00

  • Rapid changes in the phosphoproteome show diverse cellular responses following stimulation of human lung fibroblasts with endothelin-1.

    abstract::The rapid phosphorylation and dephosphorylation of a variety of proteins downstream of the endothelin receptors A and B was investigated following stimulation of human lung fibroblasts with endothelin-1. Changes in the phosphorylation of proteins involved in the cell cycle, cytoskeleton, membrane channels, transcripti...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi035414u

    authors: Stannard C,Soskic V,Godovac-Zimmermann J

    更新日期:2003-12-02 00:00:00

  • Affinity labeling and functional analysis of the primer binding domain of HIV-1 reverse transcriptase.

    abstract::Six affinity reagents containing chemically reactive groups, either on the phosphate residue at the 5'-end or on the 5'- or 3'-end internucleoside phosphate linkages of the oligothymidylate primers, were used to covalently modify the human immunodeficiency virus type 1 reverse transcriptase (HIV-1 RT). After covalent ...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi00065a015

    authors: Andreola ML,Tarrago-Litvak L,Levina AS,Kolocheva TI,el Dirani-Diab R,Jamkovoy VI,Khalimskaya NL,Barr PJ,Litvak S,Nevinsky GA

    更新日期:1993-04-13 00:00:00

  • Evidence for a quantitative tissue-specific distribution of high mobility group chromosomal proteins.

    abstract::The quantitative tissue specificity of the high mobility group (HMG) chromosomal proteins was investigated. Perchloric acid (PCA) extracts of four different chicken tissues and erythrocytes contained three proteins which comigrated on NaDodSO4-polyacrylamide gels with the HMG's 1,2, and E from erythrocyte nuclei. Thes...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi00560a003

    authors: Gordon JS,Rosenfeld BI,Kaufman R,Williams DL

    更新日期:1980-09-16 00:00:00

  • Determination of the three-dimensional structure of the bifunctional alpha-amylase/trypsin inhibitor from ragi seeds by NMR spectroscopy.

    abstract::The three-dimensional structure of the bifunctional alpha-amylase/trypsin inhibitor (RBI) from seeds of ragi (Eleusine coracana Gaertneri) has been determined in solution using multidimensional 1H and 15N NMR spectroscopy. The inhibitor consists of 122 amino acids, with 5 disulfide bridges, and belongs to the plant al...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi00026a009

    authors: Strobl S,Mühlhahn P,Bernstein R,Wiltscheck R,Maskos K,Wunderlich M,Huber R,Glockshuber R,Holak TA

    更新日期:1995-07-04 00:00:00

  • Molecular cloning of testicular 20 alpha-hydroxysteroid dehydrogenase: identity with aldose reductase.

    abstract::Complementary DNA (cDNA) clones encoding bovine testicular 20 alpha-hydroxysteroid dehydrogenase (20 alpha-HSD) have been isolated from a bovine testicular lambda gt11 library using polyclonal antibodies against 20 alpha-HSD and DNA probe hybridization. Nucleotide sequencing of three independently isolated clones was ...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi00057a003

    authors: Warren JC,Murdock GL,Ma Y,Goodman SR,Zimmer WE

    更新日期:1993-02-16 00:00:00

  • Synthesis of 3'-C-methyladenosine and 3'-C-methyluridine diphosphates and their interaction with the ribonucleoside diphosphate reductase from Corynebacterium nephridii.

    abstract::Two nucleoside diphosphate analogs, 3'-C-methyl-ADP and 3'-C-methyl-UDP, have been tested as substrate and/or allosteric effectors using the adenosylcobalamin-dependent ribonucleoside diphosphate reductase of Corynebacterium nephridii. Neither analog was a substrate for the reductase. However, they did function as all...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi00160a035

    authors: Ong SP,Nelson LS,Hogenkamp HP

    更新日期:1992-11-17 00:00:00

  • A novel method for determining rate constants for dehydration of aldehyde hydrates.

    abstract::A method has been developed for calculating rate constants for dehydration of aldehydes that induce ATPase reactions by kinases and where 18O is transferred from the aldehyde or its hydrate to inorganic phosphate during the reaction. The method involves measurement of the fraction of 18O in phosphate by 31P NMR after ...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi00317a011

    authors: Rendina AR,Hermes JD,Cleland WW

    更新日期:1984-10-23 00:00:00

  • Primary quinone (QA) binding site of bacterial photosynthetic reaction centers: mutations at residue M265 probed by FTIR spectroscopy.

    abstract::In the primary quinone (Q(A)) binding site of Rb. sphaeroides reaction centers (RCs), isoleucine M265 is in extensive van der Waals contact with the ubiquinone headgroup. Substitution of threonine or serine for this residue (mutants M265IT and M265IS), but not valine (mutant M265IV), lowers the redox midpoint potentia...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi026958j

    authors: Wells TA,Takahashi E,Wraight CA

    更新日期:2003-04-15 00:00:00

  • Thermodynamics of ligand binding to trp repressor.

    abstract::The thermodynamics of L-tryptophan and operator DNA binding to the tryptophan repressor of Escherichia coli were analyzed by titration microcalorimetry and van't Hoff analysis of footprinting titrations, respectively. At 25 degrees C in 10 mM sodium phosphate, pH 7.6, and 0.1 M NaCl, the binding of L-tryptophan to the...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi00079a029

    authors: Jin L,Yang J,Carey J

    更新日期:1993-07-20 00:00:00