Rapid evolution of an adaptive cyanogenesis cline in introduced North American white clover (Trifolium repens L.).

Abstract:

:White clover is polymorphic for cyanogenesis (HCN production after tissue damage), and this herbivore defence polymorphism has served as a classic model for studying adaptive variation. The cyanogenic phenotype requires two interacting biochemical components; the presence/absence of each component is controlled by a simple Mendelian gene (Ac/ac and Li/li). Climate-associated cyanogenesis clines occur in both native (Eurasian) and introduced populations worldwide, with cyanogenic plants predominating in warmer locations. Moreover, previous studies have suggested that epistatic selection may act within populations to maintain cyanogenic (AcLi) plants and acyanogenic plants that lack both components (acli plants) at the expense of plants possessing a single component (Acli and acLi plants). Here, we examine the roles of selection, gene flow and demography in the evolution of a latitudinal cyanogenesis cline in introduced North American populations. Using 1145 plants sampled across a 1650 km transect, we determine the distribution of cyanogenesis variation across the central United States and investigate whether clinal variation is adaptive or an artefact of population introduction history. We also test for the evidence of epistatic selection. We detect a clear latitudinal cline, with cyanogenesis frequencies increasing from 11% to 86% across the transect. Population structure analysis using nine microsatellite loci indicates that the cline is adaptive and not a by-product of demographic history. However, we find no evidence for epistatic selection within populations. Our results provide strong evidence for rapid adaptive evolution in these introduced populations, and they further suggest that the mechanisms maintaining adaptive variation may vary among populations of a species.

journal_name

Mol Ecol

journal_title

Molecular ecology

authors

Kooyers NJ,Olsen KM

doi

10.1111/j.1365-294X.2012.05486.x

subject

Has Abstract

pub_date

2012-05-01 00:00:00

pages

2455-68

issue

10

eissn

0962-1083

issn

1365-294X

journal_volume

21

pub_type

杂志文章
  • Differential gene expression in narrow- and broad-headed European glass eels (Anguilla anguilla) points to a transcriptomic link of head shape dimorphism with growth rate and chemotaxis.

    abstract::One of the major challenges in evolutionary biology is to understand the mechanisms underlying morphological dimorphism and plasticity, including the genomic basis of traits and links to ecology. At the yellow eel stage of the European eel (Anguilla anguilla), two morphotypes are found: broad- and narrow-heads. This d...

    journal_title:Molecular ecology

    pub_type: 杂志文章

    doi:10.1111/mec.14155

    authors: De Meyer J,Maes GE,Dirks RP,Adriaens D

    更新日期:2017-08-01 00:00:00

  • The genetic structure of cattle populations (Bos taurus) in northern Eurasia and the neighbouring Near Eastern regions: implications for breeding strategies and conservation.

    abstract::We investigated the genetic structure and variation of 21 populations of cattle (Bos taurus) in northern Eurasia and the neighbouring Near Eastern regions of the Balkan, the Caucasus and Ukraine employing 30 microsatellite markers. By analyses of population relationships, as well as by a Bayesian-based clustering appr...

    journal_title:Molecular ecology

    pub_type: 杂志文章

    doi:10.1111/j.1365-294X.2007.03437.x

    authors: Li MH,Tapio I,Vilkki J,Ivanova Z,Kiselyova T,Marzanov N,Cinkulov M,Stojanović S,Ammosov I,Popov R,Kantanen J

    更新日期:2007-09-01 00:00:00

  • Polyploidy and DNA methylation: new tools available.

    abstract::Most plant species are recent or ancient polyploids (displaying at least one round of genome duplication in their history). Cultivated species (e.g. wheat, cotton, canola, sugarcane, coffee) and invasive species are often relatively recent polyploids, and frequently of hybrid origin (i.e. allopolyploids). Despite the ...

    journal_title:Molecular ecology

    pub_type: 评论,杂志文章

    doi:10.1111/j.1365-294X.2009.04461.x

    authors: Salmon A,Ainouche ML

    更新日期:2010-01-01 00:00:00

  • Contrasting patterns of mitochondrial and microsatellite population structure in fragmented populations of greater prairie-chickens.

    abstract::Greater prairie-chickens (Tympanuchus cupido pinnatus) were once found throughout the tallgrass prairie of midwestern North America but over the last century these prairies have been lost or fragmented by human land use. As a consequence, many current populations of prairie-chickens have become isolated and small. Thi...

    journal_title:Molecular ecology

    pub_type: 杂志文章

    doi:10.1046/j.1365-294x.2003.02013.x

    authors: Johnson JA,Toepfer JE,Dunn PO

    更新日期:2003-12-01 00:00:00

  • Estimation of the dispersal of a major pest of maize by cline analysis of a temporary contact zone between two invasive outbreaks.

    abstract::Dispersal is a key factor in invasion and in the persistence and evolution of species. Despite the importance of estimates of dispersal distance, dispersal measurement remains a real methodological challenge. In this study, we characterized dispersal by exploiting a specific case of biological invasion, in which multi...

    journal_title:Molecular ecology

    pub_type: 杂志文章

    doi:10.1111/mec.12489

    authors: Bermond G,Blin A,Vercken E,Ravigné V,Rieux A,Mallez S,Morel-Journel T,Guillemaud T

    更新日期:2013-11-01 00:00:00

  • The effect of genetic and environmental variation on metabolic gene expression.

    abstract::What is the relationship between genetic or environmental variation and the variation in messenger RNA (mRNA) expression? To address this, microarrays were used to examine the effect of genetic and environmental variation on cardiac mRNA expression for metabolic genes in three groups of Fundulus heteroclitus: (i) indi...

    journal_title:Molecular ecology

    pub_type: 杂志文章

    doi:10.1111/j.1365-294X.2009.04235.x

    authors: Scott CP,Williams DA,Crawford DL

    更新日期:2009-07-01 00:00:00

  • Genetic structuring and recent demographic history of red pandas (Ailurus fulgens) inferred from microsatellite and mitochondrial DNA.

    abstract::Clarification of the genetic structure and population history of a species can shed light on the impacts of landscapes, historical climate change and contemporary human activities and thus enables evidence-based conservation decisions for endangered organisms. The red panda (Ailurus fulgens) is an endangered species d...

    journal_title:Molecular ecology

    pub_type: 杂志文章

    doi:10.1111/j.1365-294X.2011.05126.x

    authors: Hu Y,Guo Y,Qi D,Zhan X,Wu H,Bruford MW,Wei F

    更新日期:2011-07-01 00:00:00

  • Population structure and conservation genetics of wild rice Oryza rufipogon (Poaceae): a region-wide perspective from microsatellite variation.

    abstract::Oryza rufipogon Griff. is the most agriculturally important but seriously endangered wild rice species. To better estimate how genetic structure can be used to obtained a conservation perspective of the species, genetic variability at six polymorphic microsatellite DNA loci was examined. High levels of genetic variabi...

    journal_title:Molecular ecology

    pub_type: 杂志文章

    doi:10.1111/j.1365-294X.2004.02108.x

    authors: Gao L

    更新日期:2004-05-01 00:00:00

  • Population structure of an endemic vulnerable species, the Jamaican boa (Epicrates subflavus).

    abstract::The Jamaican boa (Epicrates subflavus; also called Yellow boa) is an endemic species whose natural populations greatly and constantly declined since the late 19th century, mainly because of predation by introduced species, human persecution, and habitat destruction. In-situ conservation of the Jamaican boa is seriousl...

    journal_title:Molecular ecology

    pub_type: 杂志文章

    doi:10.1111/j.1365-294X.2007.03588.x

    authors: Tzika AC,Koenig S,Miller R,Garcia G,Remy C,Milinkovitch MC

    更新日期:2008-01-01 00:00:00

  • Adaptive divergence despite strong genetic drift: genomic analysis of the evolutionary mechanisms causing genetic differentiation in the island fox (Urocyon littoralis).

    abstract::The evolutionary mechanisms generating the tremendous biodiversity of islands have long fascinated evolutionary biologists. Genetic drift and divergent selection are predicted to be strong on islands and both could drive population divergence and speciation. Alternatively, strong genetic drift may preclude adaptation....

    journal_title:Molecular ecology

    pub_type: 杂志文章

    doi:10.1111/mec.13605

    authors: Funk WC,Lovich RE,Hohenlohe PA,Hofman CA,Morrison SA,Sillett TS,Ghalambor CK,Maldonado JE,Rick TC,Day MD,Polato NR,Fitzpatrick SW,Coonan TJ,Crooks KR,Dillon A,Garcelon DK,King JL,Boser CL,Gould N,Andelt WF

    更新日期:2016-05-01 00:00:00

  • Strict monandry in the ponerine army ant genus Simopelta suggests that colony size and complexity drive mating system evolution in social insects.

    abstract::Altruism in social insects has evolved between closely related full-siblings. It is therefore of considerable interest why some groups have secondarily evolved low within-colony relatedness, which in turn affects the relatedness incentives of within-colony cooperation and conflict. The highest queen mating frequencies...

    journal_title:Molecular ecology

    pub_type: 杂志文章

    doi:10.1111/j.1365-294X.2010.04945.x

    authors: Kronauer DJ,O'Donnell S,Boomsma JJ,Pierce NE

    更新日期:2011-01-01 00:00:00

  • Matrilinear phylogeography of Atlantic salmon (Salmo salar L.) in Europe and postglacial colonization of the Baltic Sea area.

    abstract::Sixty-four samples from 46 salmon populations totalling 2369 specimens were used for polymerase chain reaction-restriction fragment length polymorphism (PCR-RFLP) analysis of the mitochondrial ND1 region. The final analyses included 3095 specimens from 60 populations in Northern Europe. A subsample was analysed by RFL...

    journal_title:Molecular ecology

    pub_type: 杂志文章

    doi:10.1046/j.1365-294x.2001.01168.x

    authors: Nilsson J,Gross R,Asplund T,Dove O,Jansson H,Kelloniemi J,Kohlmann K,Löytynoja A,Nielsen EE,Paaver T,Primmer CR,Titov S,Vasemägi A,Veselov A,Ost T,Lumme J

    更新日期:2001-01-01 00:00:00

  • Fine-mapping natural alleles: quantitative complementation to the rescue.

    abstract::Mapping the genes responsible for natural variation and divergence is a challenging task. Many studies have mapped genes to genomic regions or generated lists of candidates, but few studies have implicated specific genes with a high standard of evidence. I propose that combining recent advances in genomic engineering ...

    journal_title:Molecular ecology

    pub_type: 杂志文章

    doi:10.1111/mec.12719

    authors: Turner TL

    更新日期:2014-05-01 00:00:00

  • Origin and post-colonization evolution of the Chatham Islands skink (Oligosoma nigriplantare nigriplantare).

    abstract::Island ecosystems provide an opportunity to examine a range of evolutionary and ecological processes. The Chatham Islands are an isolated archipelago situated approximately 800 km east of New Zealand. Geological evidence indicates that the Chatham Islands re-emerged within the last 1-4 million years, following a prolo...

    journal_title:Molecular ecology

    pub_type: 杂志文章

    doi:10.1111/j.1365-294X.2008.03832.x

    authors: Liggins L,Chapple DG,Daugherty CH,Ritchie PA

    更新日期:2008-07-01 00:00:00

  • Allopatric speciation despite historical gene flow: Divergence and hybridization in Carex furva and C. lucennoiberica (Cyperaceae) inferred from plastid and nuclear RAD-seq data.

    abstract::Gene flow among incipient species can act as a creative or destructive force in the speciation process, generating variation on which natural selection can act while, potentially, undermining population divergence. The flowering plant genus Carex exhibits a rapid and relatively recent radiation with many species limit...

    journal_title:Molecular ecology

    pub_type: 杂志文章

    doi:10.1111/mec.14253

    authors: Maguilla E,Escudero M,Hipp AL,Luceño M

    更新日期:2017-10-01 00:00:00

  • Comparative phylogeography and postglacial colonization routes in Europe.

    abstract::The Quaternary cold periods in Europe are thought to have heavily influenced the amount and distribution of intraspecific genetic variation in both animals and plants. The phylogeographies of 10 taxa, including mammals (Ursus arctos, Sorex spp., Crocidura suaveolens, Arvicola spp.), amphibians (Triturus spp.), arthrop...

    journal_title:Molecular ecology

    pub_type: 杂志文章

    doi:10.1046/j.1365-294x.1998.00289.x

    authors: Taberlet P,Fumagalli L,Wust-Saucy AG,Cosson JF

    更新日期:1998-04-01 00:00:00

  • Genetic assignment of recruits reveals short- and long-distance larval dispersal in Pocillopora damicornis on the Great Barrier Reef.

    abstract::Understanding connectivity of coral populations among and within reefs over ecologically significant timescales is essential for developing evidence-based management strategies, including the design of marineprotected areas. Here, we present the first assessment of contemporary connectivity among populations of two Mo...

    journal_title:Molecular ecology

    pub_type: 杂志文章

    doi:10.1111/mec.12539

    authors: Torda G,Lundgren P,Willis BL,van Oppen MJ

    更新日期:2013-12-01 00:00:00

  • Polyploid evolution and plastid DNA variation in the Dactylorhiza incarnata/maculata complex (Orchidaceae) in Scandinavia.

    abstract::The Dactylorhiza incarnata/maculata complex (Orchidaceae) was used as a model system to understand genetic differentiation processes in a naturally occurring polyploid complex with much of ongoing diversification and wide distribution in recently glaciated areas in northern Europe. Data were obtained for 12 hypervaria...

    journal_title:Molecular ecology

    pub_type: 杂志文章

    doi:10.1111/j.1365-294X.2008.03965.x

    authors: Hedrén M,Nordström S,Ståhlberg D

    更新日期:2008-12-01 00:00:00

  • Molecular evidence of the survival of subterranean amphipods (Arthropoda) during Ice Age underneath glaciers in Iceland.

    abstract::A Two endemic groundwater arthropod crustacean species, Crangonyx islandicus and Crymostygius thingvallensis, were recently discovered on the mid-Atlantic volcanic island of Iceland. The extent of morphological differences from closest relatives, endemism, along with the geographic isolation of Iceland and its complet...

    journal_title:Molecular ecology

    pub_type: 杂志文章

    doi:10.1111/j.1365-294X.2010.04663.x

    authors: Kornobis E,Pálsson S,Kristjánsson BK,Svavarsson J

    更新日期:2010-06-01 00:00:00

  • Mixed-stock analysis reveals the migrations of juvenile hawksbill turtles (Eretmochelys imbricata) in the Caribbean Sea.

    abstract::Hawksbill turtles (Eretmochelys imbricata) migrate between nesting beaches and feeding habitats that are often associated with tropical reefs, but it is uncertain which nesting colonies supply which feeding habitats. To address this gap in hawksbill biology, we compile previously published and new mitochondrial DNA (m...

    journal_title:Molecular ecology

    pub_type: 杂志文章

    doi:10.1111/j.1365-294X.2006.03096.x

    authors: Bowen BW,Grant WS,Hillis-Starr Z,Shaver DJ,Bjorndal KA,Bolten AB,Bass AL

    更新日期:2007-01-01 00:00:00

  • Prey choice by carabid beetles feeding on an earthworm community analysed using species- and lineage-specific PCR primers.

    abstract::The carabid beetle Pterostichus melanarius is a major natural enemy of pests, such as aphids and slugs in agricultural systems. Earthworms are a dominant non-pest component of the diet of P. melanarius which help sustain the beetles during periods when the pest population is low or absent. In this study we wanted to t...

    journal_title:Molecular ecology

    pub_type: 杂志文章

    doi:10.1111/j.1365-294X.2010.04602.x

    authors: King RA,Vaughan IP,Bell JR,Bohan DA,Symondson WO

    更新日期:2010-04-01 00:00:00

  • Rapid assessment of single-copy nuclear DNA variation in diverse species.

    abstract::We investigated the use of PCR primers designed to conserved exons within nuclear DNA to amplify potentially variable regions such as introns or hypervariable exons from a wide range of species. We then explored various approaches to assay population-level variation in these PCR products. Primers designed to amplify r...

    journal_title:Molecular ecology

    pub_type: 杂志文章

    doi:10.1111/j.1365-294x.1993.tb00029.x

    authors: Slade RW,Moritz C,Heideman A,Hale PT

    更新日期:1993-12-01 00:00:00

  • QTL linkage mapping of wing length in zebra finch using genome-wide single nucleotide polymorphisms markers.

    abstract::Avian wing length is an important trait that covaries with the ecology and migratory behaviour of a species and tends to change rapidly when the conditions are altered. Long-distance migrants typically have longer wings than short-distance migrants and sedentary species, and long-winged species also tend to be more di...

    journal_title:Molecular ecology

    pub_type: 杂志文章

    doi:10.1111/j.1365-294X.2011.05365.x

    authors: Schielzeth H,Forstmeier W,Kempenaers B,Ellegren H

    更新日期:2012-01-01 00:00:00

  • Microsatellite analysis of demographic genetic structure in fragmented populations of the tropical tree Symphonia globulifera.

    abstract::We developed genetic markers for three microsatellite loci in the tropical tree Symphonia globulifera and used them to examine the demographic genetic consequences of forest fragmentation. High levels of genetic variation were revealed in samples of adults, saplings, and seedlings. The more-variable loci exhibited les...

    journal_title:Molecular ecology

    pub_type: 杂志文章

    doi:10.1046/j.1365-294x.1998.00396.x

    authors: Aldrich PR,Hamrick JL,Chavarriaga P,Kochert G

    更新日期:1998-08-01 00:00:00

  • The recent history and population structure of five Mandarina snail species from subtropical Ogasawara (Bonin Islands, Japan).

    abstract::The effect of Pleistocene climate change on the organisms of tropical and subtropical regions is rather poorly understood. We therefore studied the land snail genus Mandarina (Bradybaenidae) of oceanic Ogasawara (Bonin Islands, Japan), with the aim of using population genetic data to understand their recent history. O...

    journal_title:Molecular ecology

    pub_type: 杂志文章

    doi:10.1111/j.1365-294X.2006.02990.x

    authors: Davison A,Chiba S

    更新日期:2006-09-01 00:00:00

  • Processes of diversification and dispersion of rice yellow mottle virus inferred from large-scale and high-resolution phylogeographical studies.

    abstract::Phylogeography of Rice yellow mottle virus (RYMV) was reconstructed from the coat protein gene sequences of a selection of 173 isolates from the 14 countries of mainland Africa where the disease occurred and from the full sequences of 16 representative isolates. Genetic variation was linked to geographical distributio...

    journal_title:Molecular ecology

    pub_type: 杂志文章

    doi:10.1111/j.1365-294X.2005.02578.x

    authors: Traore O,Sorho F,Pinel A,Abubakar Z,Banwo O,Maley J,Hebrard E,Winter S,Sere Y,Konate G,Fargette D

    更新日期:2005-06-01 00:00:00

  • Parasite genetic distance and local adaptation in co-evolving bacteria-bacteriophage populations.

    abstract::Antagonistic co-evolution between hosts and parasites can lead to local adaptation (LA) such that parasite fitness is greatest in sympatric hosts (or vice versa). The magnitude of LA typically increases with geographical distance, which is assumed to be because genetic (and hence phenotypic) distance increases with ge...

    journal_title:Molecular ecology

    pub_type: 杂志文章

    doi:10.1111/mec.13897

    authors: Scanlan PD,Hall AR,Buckling A

    更新日期:2017-04-01 00:00:00

  • Urbanization as a facilitator of gene flow in a human health pest.

    abstract::Urban fragmentation can reduce gene flow that isolates populations, reduces genetic diversity and increases population differentiation, all of which have negative conservation implications. Alternatively, gene flow may actually be increased among urban areas consistent with an urban facilitation model. In fact, urban ...

    journal_title:Molecular ecology

    pub_type: 杂志文章

    doi:10.1111/mec.14783

    authors: Miles LS,Johnson JC,Dyer RJ,Verrelli BC

    更新日期:2018-07-04 00:00:00

  • Mitochondrial and microsatellite DNA markers reveal a Balkan origin for the highly invasive horse-chestnut leaf miner Cameraria ohridella (Lepidoptera, Gracillariidae).

    abstract::Biological invasions usually start with a small number of founder individuals. These founders are likely to represent a small fraction of the total genetic diversity found in the source population. Our study set out to trace genetically the geographical origin of the horse-chestnut leafminer, Cameraria ohridella, an i...

    journal_title:Molecular ecology

    pub_type: 杂志文章

    doi:10.1111/j.1365-294X.2009.04290.x

    authors: Valade R,Kenis M,Hernandez-Lopez A,Augustin S,Mari Mena N,Magnoux E,Rougerie R,Lakatos F,Roques A,Lopez-Vaamonde C

    更新日期:2009-08-01 00:00:00

  • Genetic structure of populations of whale sharks among ocean basins and evidence for their historic rise and recent decline.

    abstract::This study presents genetic evidence that whale sharks, Rhincodon typus, are comprised of at least two populations that rarely mix and is the first to document a population expansion. Relatively high genetic structure is found when comparing sharks from the Gulf of Mexico with sharks from the Indo-Pacific. If mixing o...

    journal_title:Molecular ecology

    pub_type: 杂志文章

    doi:10.1111/mec.12754

    authors: Vignaud TM,Maynard JA,Leblois R,Meekan MG,Vázquez-Juárez R,Ramírez-Macías D,Pierce SJ,Rowat D,Berumen ML,Beeravolu C,Baksay S,Planes S

    更新日期:2014-05-01 00:00:00