Population structure and conservation genetics of wild rice Oryza rufipogon (Poaceae): a region-wide perspective from microsatellite variation.

abstract：:Dispersal is a fundamental attribute of species in nature and shapes population dynamics, evolutionary trajectories and genetic variation across spatial and temporal scales. It is increasingly clear that landscape features have large impacts on dispersal patterns. Thus, understanding how individuals and species move t...

journal_title：Molecular ecology

authors： Row JR,Blouin-Demers G,Lougheed SC

更新日期：2010-12-01 00:00:00

abstract：:Analysis of mitochondrial DNA sequence variation has been used extensively to study the evolutionary relationships of individuals and populations, both within and across species. So ubiquitous and easily acquired are mtDNA data that it has been suggested that such data could serve as a taxonomic 'barcode' for an objec...

journal_title：Molecular ecology

authors： Thalmann O,Hebler J,Poinar HN,Pääbo S,Vigilant L

更新日期：2004-02-01 00:00:00

abstract：:A comparative study between microsatellite and allozyme markers was conducted on natural populations of resident brown trout (Salmo trutta) sampled over a reduced geographical scale and on hatchery strains. The higher level of polymorphism observed at microsatellite loci resulted in higher power of statistical tests f...

journal_title：Molecular ecology

authors： Estoup A,Rousset F,Michalakis Y,Cornuet JM,Adriamanga M,Guyomard R

更新日期：1998-03-01 00:00:00

abstract：:The genus Epipactis contains a problematical complex of autogamous taxa among which species limits are difficult to define. Different authors have treated these plants in different ways, some recognizing the different taxa as distinct species, others considering them as minor intraspecific variants. These contrasting ...

journal_title：Molecular ecology

authors： Squirrell J,Hollingsworth PM,Bateman RM,Tebbitt MC,Hollingsworth ML

更新日期：2002-10-01 00:00:00

abstract：:The Southern Ocean contains some of the most isolated islands on Earth, and fundamental questions remain regarding their colonization and the connectivity of their coastal biotas. Here, we conduct a genetic investigation into the Cellana strigilis (limpet) complex that was originally classified based on morphological ...

journal_title：Molecular ecology

authors： Reisser CM,Wood AR,Bell JJ,Gardner JP

更新日期：2011-08-01 00:00:00

abstract：:A recent region-wide study determined that the central California coyote (Canis latrans) population was genetically subdivided according to habitat bioregions, supporting the hypothesis that coyotes exhibit a dispersal bias toward their natal habitat type. Here, we further investigated this hypothesis using radio-coll...

journal_title：Molecular ecology

authors： Sacks BN,Mitchell BR,Williams CL,Ernest HB

更新日期：2005-04-01 00:00:00

abstract：:The Devils Hole pupfish (Cyprinodon diabolis; DHP) is an icon of conservation biology. Isolated in a 50 m(2) pool (Devils Hole), DHP is one of the rarest vertebrate species known and an evolutionary anomaly, having survived in complete isolation for thousands of years. However, recent findings suggest DHP might be you...

journal_title：Molecular ecology

authors： Sağlam İK,Baumsteiger J,Smith MJ,Linares-Casenave J,Nichols AL,O'Rourke SM,Miller MR

更新日期：2016-08-01 00:00:00

abstract：:This study of a group of semi-free-ranging Barbary macaques Macaca sylvanus aimed to determine paternity, to establish whether any individual male achieved prominent mating success and to assess genetic variability. Analyses involved electrophoresis of 15 blood protein systems and multilocus DNA fingerprinting (isotop...

journal_title：Molecular ecology

authors： von Segesser F,Scheffrahn W,Martin RD

更新日期：1995-02-01 00:00:00

abstract：:Factors ranging from ecological opportunity to genome composition might explain why only some lineages form adaptive radiations. While being rare, particular systems can provide natural experiments within an identical ecological setting where species numbers and phenotypic divergence in two closely related lineages ar...

journal_title：Molecular ecology

authors： Xiong P,Hulsey CD,Fruciano C,Wong WY,Nater A,Kautt AF,Simakov O,Pippel M,Kuraku S,Meyer A,Franchini P

更新日期：2020-12-11 00:00:00

abstract：:Effective population size (N(e)) is a key parameter to understand evolutionary processes and the viability of endangered populations as it determines the rate of genetic drift and inbreeding. Low Ne can lead to inbreeding depression and reduced population adaptability. In this study, we estimated contemporary N(e) usi...

journal_title：Molecular ecology

authors： Baalsrud HT,Saether BE,Hagen IJ,Myhre AM,Ringsby TH,Pärn H,Jensen H

更新日期：2014-06-01 00:00:00

abstract：:Understanding the evolutionary consequences of human-mediated introductions of domesticated strains into the wild and their subsequent admixture with natural populations is of major concern in conservation biology. However, the genomic impacts of stocking from distinct sources (locally derived vs. divergent) on the ge...

journal_title：Molecular ecology

authors： Leitwein M,Gagnaire PA,Desmarais E,Berrebi P,Guinand B

更新日期：2018-09-01 00:00:00

abstract：:The population concept is central in evolutionary and conservation biology, but identifying the boundaries of natural populations is often challenging. Here, we present a new approach for assessing spatial genetic structure without the a priori assumptions on the locations of populations made by adopting an individual...

journal_title：Molecular ecology

authors： Manel S,Berthoud F,Bellemain E,Gaudeul M,Luikart G,Swenson JE,Waits LP,Taberlet P,Intrabiodiv Consortium.

更新日期：2007-05-01 00:00:00

abstract：:Weedy rice (Oryza spp.), a weedy relative of cultivated rice (O. sativa), infests and persists in cultivated rice fields worldwide. Many weedy rice populations have evolved similar adaptive traits, considered part of the 'agricultural weed syndrome', making this an ideal model to study the genetic basis of parallel ev...

journal_title：Molecular ecology

authors： Huang Z,Young ND,Reagon M,Hyma KE,Olsen KM,Jia Y,Caicedo AL

更新日期：2017-06-01 00:00:00

abstract：:Genome divergence is greatly influenced by gene flow during early stages of speciation. As populations differentiate, geographic barriers can constrain gene flow and so affect the dynamics of divergence and speciation. Current geography, specifically disjunction and continuity of ranges, is often used to predict the h...

journal_title：Molecular ecology

authors： Peñalba JV,Joseph L,Moritz C

更新日期：2019-02-01 00:00:00

abstract：:Crop-wild hybridization has been documented in many cultivated species, but the ecological and genetic factors that influence the likelihood or rate that cultivar alleles will introgress into wild populations are poorly understood. Seed predation is one factor that could mitigate the spread of otherwise advantageous c...

journal_title：Molecular ecology

authors： Dechaine JM,Burger JC,Burke JM

更新日期：2010-08-01 00:00:00

abstract：:The deadly poisonous Amanita phalloides is common along the west coast of North America. Death cap mushrooms are especially abundant in habitats around the San Francisco Bay, California, but the species grows as far south as Los Angeles County and north to Vancouver Island, Canada. At different times, various authors ...

journal_title：Molecular ecology

authors： Pringle A,Adams RI,Cross HB,Bruns TD

更新日期：2009-03-01 00:00:00

abstract：:Freshwater biomonitoring programmes routinely sample aquatic macroinvertebrates. These samples are time-consuming to collect, as well as challenging and costly to identify reliably genus or species. Environmental DNA (eDNA) metabarcoding has emerged as a surrogate to traditional collection techniques and has been used...

journal_title：Molecular ecology

authors： Gleason JE,Elbrecht V,Braukmann TWA,Hanner RH,Cottenie K

更新日期：2020-08-16 00:00:00

abstract：:We examined the consequences of barriers, stream architecture and putative dispersal capability on levels of genetic differentiation among populations of the freshwater fish Craterocephalus stercusmuscarum. Seven polymorphic allozyme loci and sequences of a 498-bp fragment of the ATPase 6 mitochondrial DNA (mtDNA) gen...

journal_title：Molecular ecology

authors： McGlashan DJ,Hughes JM

更新日期：2000-11-01 00:00:00

abstract：:Phylogeography of Rice yellow mottle virus (RYMV) was reconstructed from the coat protein gene sequences of a selection of 173 isolates from the 14 countries of mainland Africa where the disease occurred and from the full sequences of 16 representative isolates. Genetic variation was linked to geographical distributio...

journal_title：Molecular ecology

authors： Traore O,Sorho F,Pinel A,Abubakar Z,Banwo O,Maley J,Hebrard E,Winter S,Sere Y,Konate G,Fargette D

更新日期：2005-06-01 00:00:00

abstract：:The concept of kinship permeates many domains of fundamental and applied biology ranging from social evolution to conservation science to quantitative and human genetics. Until recently, pedigrees were the gold standard to infer kinship, but the advent of next-generation sequencing and the availability of dense geneti...

journal_title：Molecular ecology

authors： Goudet J,Kay T,Weir BS

更新日期：2018-10-01 00:00:00

abstract：:Sex chromosomes are believed to be stable in endotherms, but young and evolutionary unstable in most ectothermic vertebrates. Within lacertids, the widely radiated lizard group, sex chromosomes have been reported to vary in morphology and heterochromatinization, which may suggest turnovers during the evolution of the ...

journal_title：Molecular ecology

authors： Rovatsos M,Vukić J,Altmanová M,Johnson Pokorná M,Moravec J,Kratochvíl L

更新日期：2016-07-01 00:00:00

abstract：:The evolution of incompatibilities between eggs and sperm is thought to play important roles in establishing and maintaining reproductive isolation among species of broadcast-spawning marine invertebrates. However, the effectiveness of gametic isolation in initiating the speciation process and/or in limiting the intro...

journal_title：Molecular ecology

authors： Addison JA,Pogson GH

更新日期：2009-03-01 00:00:00

abstract：:Adaptation to new environments often occurs in the face of gene flow. Under these conditions, gene flow and recombination can impede adaptation by breaking down linkage disequilibrium between locally adapted alleles. Theory predicts that this decay can be halted or slowed if adaptive alleles are tightly linked in regi...

journal_title：Molecular ecology

authors： Samuk K,Owens GL,Delmore KE,Miller SE,Rennison DJ,Schluter D

更新日期：2017-09-01 00:00:00

abstract：:Major histocompatibility complex (MHC) genes, coding molecules which play an important role in immune response, are the most polymorphic genes known in vertebrates. However, MHC polymorphism in some species is limited. MHC monomorphism at several MHC class I and II loci was previously reported for two neighbouring nor...

journal_title：Molecular ecology

authors： Babik W,Durka W,Radwan J

更新日期：2005-12-01 00:00:00

abstract：:An isolated population of dark-eyed juncos, Junco hyemalis, became established on the campus of the University of California at San Diego (UCSD), probably in the early 1980s. It now numbers about 70 breeding pairs. Populations across the entire natural range of the subspecies J. h. thurberi are weakly differentiated f...

journal_title：Molecular ecology

authors： Rasner CA,Yeh P,Eggert LS,Hunt KE,Woodruff DS,Price TD

更新日期：2004-03-01 00:00:00

abstract：:Both models and case studies suggest that chromosomal inversions can facilitate adaptation and speciation in the presence of gene flow by suppressing recombination between locally adapted alleles. Until recently, however, it has been laborious and time-consuming to identify and genotype inversions in natural populatio...

journal_title：Molecular ecology

authors： Huang K,Andrew RL,Owens GL,Ostevik KL,Rieseberg LH

更新日期：2020-07-01 00:00:00

abstract：:To explore how biogeography, parasite life history and host vagility influences evolutionary codivergences, we followed a comparative phylogeography approach using a host-specific nonpermanent mite, Laelaps giganteus, that occurs on four rodent species within the genus Rhabdomys. A mtDNA COI haplotype network derived ...

journal_title：Molecular ecology

authors： Engelbrecht A,Matthee S,du Toit N,Matthee CA

更新日期：2016-02-01 00:00:00

abstract：:The primary goal of captive breeding programmes for endangered species is to prevent extinction, a component of which includes the preservation of genetic diversity and avoidance of inbreeding. This is typically accomplished by minimizing mean kinship in the population, thereby maintaining equal representation of the ...

journal_title：Molecular ecology

authors： Hammerly SC,Morrow ME,Johnson JA

更新日期：2013-11-01 00:00:00

abstract：:Chihuahua spruce (Picea chihuahuana Martínez) is a montane subtropical conifer endemic to the Sierra Madre Occidental in northwestern México. Range-wide variation was investigated using maternally inherited mitochondrial (mtDNA) and paternally inherited chloroplast (cpDNA) DNA markers. Among the 16 mtDNA regions analy...

journal_title：Molecular ecology

authors： Jaramillo-Correa JP,Beaulieu J,Ledig FT,Bousquet J

更新日期：2006-09-01 00:00:00

abstract：:Biological invasions usually start with a small number of founder individuals. These founders are likely to represent a small fraction of the total genetic diversity found in the source population. Our study set out to trace genetically the geographical origin of the horse-chestnut leafminer, Cameraria ohridella, an i...

journal_title：Molecular ecology

authors： Valade R,Kenis M,Hernandez-Lopez A,Augustin S,Mari Mena N,Magnoux E,Rougerie R,Lakatos F,Roques A,Lopez-Vaamonde C

更新日期：2009-08-01 00:00:00