Light-induced conformational changes in photosynthetic reaction centers: impact of detergents and lipids on the electronic structure of the primary electron donor.

Abstract:

:Light-induced hypsochromic shifts of the Q(y) absorption band of the bacteriochlorophyll dimer (P) from 865 to 850 nm were identified using continuous illumination of dark-adapted reaction centers (RCs) from Rhodobacter capsulatus when dispersed in the most commonly used detergent, the zwitterionic lauryl N-dimethylamine-N-oxide. Such a shift is known to be the consequence of the decreased degree of delocalization of P. A 2-fold acceleration of the recovery kinetics of P(+) was found in RCs that underwent light-induced structural changes compared to those where the P-band position did not change. The light-induced shift was irreversible except in the presence of a secondary electron donor. Prolonged (15 min) illumination resulted in a shift in the position of the P-band even in neutral or negatively charged detergents. In contrast, RCs reconstituted into liposomes made from lipids with different headgroup charges showed light-induced shifts only if shorter fatty acid chains were used. The light-induced conformational changes caused a prominent decrease of the redox potential of P ranging from 120 to 160 mV depending on the detergent compared to the potential of P in dark-adapted reaction centers. The measured light-induced potential decreases were 55 to 85 mV larger than those reported for reaction centers where the P-band position remained at 865 nm. The influence of structural factors, such as the delocalization of the electron hole on P(+), the involvement of Tyr M210, and the hydrophobic mismatch between the thickness of the hydrophobic belt of the detergent micelles or the lipid bilayer and the RC protein, on the spectral features and electron transfer kinetics is discussed.

journal_name

Biochemistry

journal_title

Biochemistry

authors

Deshmukh SS,Akhavein H,Williams JC,Allen JP,Kalman L

doi

10.1021/bi200595z

subject

Has Abstract

pub_date

2011-06-14 00:00:00

pages

5249-62

issue

23

eissn

0006-2960

issn

1520-4995

journal_volume

50

pub_type

杂志文章
  • Biochemical and kinetic characteristics of the interaction of the antitumor antibiotic sparsomycin with prokaryotic and eukaryotic ribosomes.

    abstract::Using 125I-labeled phenol-alanine sparsomycin, an analogue of sparsomycin having higher biological activity than the unmodified antibiotic, we studied the requirements and the characteristics of its interaction with the ribosome. The drug does not bind to either isolated ribosomal subunits or reconstituted whole ribos...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi00104a011

    authors: Lazaro E,van den Broek LA,San Felix A,Ottenheijm HC,Ballesta JP

    更新日期:1991-10-08 00:00:00

  • Linkage between ligand binding and control of tubulin conformation.

    abstract::The effect of both antimitotic drugs and nucleotide analogues on the magnesium-induced self-association of purified tubulin into 42S double rings has been examined by sedimentation velocity. In the absence of magnesium, all complexes sedimented as the 5.8S species. The binding of colchicine to tubulin led to a small b...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi00149a044

    authors: Shearwin KE,Timasheff SN

    更新日期:1992-09-01 00:00:00

  • Volumetric characterization of tri-N-acetylglucosamine binding to lysozyme.

    abstract::Volumetric characteristics of protein recognition events determine the direction of pressure-induced shifts in the recognition reaction, while also providing insights into the structural, dynamic, and hydration changes. We report changes in volume, ΔV, and adiabatic compressibility, ΔK(S), accompanying the binding of ...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi3006994

    authors: Son I,Shek YL,Dubins DN,Chalikian TV

    更新日期:2012-07-24 00:00:00

  • Activation-induced subcellular redistribution of G alpha(s) is dependent upon its unique N-terminus.

    abstract::The heterotrimeric G protein subunit, alpha(s), can move reversibly from plasma membranes to cytoplasm in response to activation by GPCRs or activating mutations. We examined the importance of the unique N-terminus of alpha(s) in this translocation in cultured cells. alpha(s) contains a single site for palmitoylation ...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi025533u

    authors: Thiyagarajan MM,Bigras E,Van Tol HH,Hébert TE,Evanko DS,Wedegaertner PB

    更新日期:2002-07-30 00:00:00

  • Ribosome subunit to polysome ratios affect the synthesis of rRNA in Drosophila cells.

    abstract::Many investigations have revealed that ribosome numbers increase in parallel with the growth rate of cells. Here we show that the absolute level of protein synthesis may not be the only factor influencing rRNA synthesis in a nondividing eukaryotic cell. Under conditions of complete (greater than 99%) inhibition of pro...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi00502a003

    authors: Yamamoto KK,Pellegrini M

    更新日期:1990-12-18 00:00:00

  • Maltosyl isothiocyanate: an affinity label for the glucose transporter of the human erythrocyte membrane. 1. Inhibition of glucose transport.

    abstract::Maltosyl isothiocyanate (MITC) has been synthesized from maltose with an overall yield of 88%. It has been found to be a potent irreversible inhibitor of zero trans influx of glucose with human erythrocytes. Kinetic analysis of glucose transport after treatment of erythrocytes with MITC revealed that VT was diminished...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi00547a025

    authors: Mullins RE,Langdon RG

    更新日期:1980-03-18 00:00:00

  • Discovery and characterization of a substrate selective p38alpha inhibitor.

    abstract::A novel inhibitor of p38 mitogen-activated protein kinase (p38), CMPD1, identified by high-throughput screening, is characterized herein. Unlike the p38 inhibitors described previously, this inhibitor is substrate selective and noncompetitive with ATP. In steady-state kinetics experiments, CMPD1 was observed to preven...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi0495073

    authors: Davidson W,Frego L,Peet GW,Kroe RR,Labadia ME,Lukas SM,Snow RJ,Jakes S,Grygon CA,Pargellis C,Werneburg BG

    更新日期:2004-09-21 00:00:00

  • Thermodynamic stability of RNA structures formed by CNG trinucleotide repeats. Implication for prediction of RNA structure.

    abstract::Trinucleotide repeat expansion diseases (TREDs) are correlated with elongation of CNG DNA and RNA repeats to pathological level. This paper shows, for the first time, complete data concerning thermodynamic stabilities of RNA with CNG trinucleotide repeats. Our studies include the stability of oligoribonucleotides comp...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi0502339

    authors: Broda M,Kierzek E,Gdaniec Z,Kulinski T,Kierzek R

    更新日期:2005-08-16 00:00:00

  • Cholesterol dynamics in membranes of raft composition: a molecular point of view from 2H and 31P solid-state NMR.

    abstract::Lipidic membrane systems that have been reported to be composed of sphingomyelin (SM)-cholesterol (Chol) microdomains or "rafts" by Dietrich et al. [palmitoyloleoyl-phosphatidylcholine(POPC)/SM/Chol, 1/1/1; Dietrich, C., Bagatolli, L. A., Volovyk, Z. N., Thompson, N. L., Levi, M., Jacobson, K., and Gratton, E. (2001) ...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi026717b

    authors: Aussenac F,Tavares M,Dufourc EJ

    更新日期:2003-02-18 00:00:00

  • Molecular mechanisms and binding site location for the noncompetitive antagonist crystal violet on nicotinic acetylcholine receptors.

    abstract::We investigated the molecular mechanisms and the binding site location for the fluorophor crystal violet (CrV), a noncompetitive antagonist of the nicotinic acetylcholine receptor (AChR). To this end, radiolabeled competition binding, fluorescence spectroscopy, Schild-type analysis, patch-clamp recordings, and molecul...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi051752e

    authors: Arias HR,Bhumireddy P,Spitzmaul G,Trudell JR,Bouzat C

    更新日期:2006-02-21 00:00:00

  • E6*, the 50 amino acid product of the most abundant spliced transcript of the e6 oncoprotein in high-risk human papillomavirus, is a promiscuous folder and binder.

    abstract::High-risk human papillomavirus E6 participates in tumorigenic progression, mainly by its ability to promote p53 degradation. HPV transcripts show a complex splicing pattern, where E6* is the most abundant transcript in high-risk HPV types, comprising the first 50 amino acids of E6. No structural or biochemical informa...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi101941c

    authors: Heer A,Alonso LG,de Prat-Gay G

    更新日期:2011-03-01 00:00:00

  • Nonphotochemical quenching of excitation energy in photosystem II. A picosecond time-resolved study of the low yield of chlorophyll a fluorescence induced by single-turnover flash in isolated spinach thylakoids.

    abstract::Chlorophyll a fluorescence emission is widely used as a noninvasive measure of a number of parameters related to photosynthetic efficiency in oxygenic photosynthetic organisms. The most important component for the estimation of photochemistry is the relative increase in fluorescence yield between dark-adapted samples ...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi9806854

    authors: Vasil'ev S,Bruce D

    更新日期:1998-08-04 00:00:00

  • Examination of sodium/glucose cotransport by using a visible glucose analogue.

    abstract::The glucose derivative, 2,2,6,6-tetramethylpiperidine-1-oxylglucose (TEMPO-glucose) was synthesized and examined for its ability to substitute for glucose as a substrate for the intestinal brush border membrane Na+/glucose cotransporter. TEMPO-glucose inhibited Na(+)-dependent phlorizin binding with an apparent KI of ...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi00231a012

    authors: Peerce BE

    更新日期:1991-04-30 00:00:00

  • Identification of the six ligands to manganese(II) in transition-state-analogue complexes of creatine kinase: oxygen-17 superhyperfine coupling from selectively labeled ligands.

    abstract::The complete coordination scheme for Mn(II) in transition-state-analogue complexes with creatine kinase has been determined by electron paramagnetic resonance (EPR) spectroscopy. Perturbations in the EPR spectra for Mn(II) due to superhyperfine coupling to 17O of selectively labeled ligands have been used to identify ...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi00565a002

    authors: Reed GH,Leyh TS

    更新日期:1980-11-25 00:00:00

  • NMR studies of DNA support the role of pre-existing minor groove variations in nucleosome indirect readout.

    abstract::We investigated how the intrinsic sequence-dependent properties probed via the phosphate linkages (BI ↔ BII equilibrium) influence the preferred shape of free DNA, and how this affects the nucleosome formation. First, this exploits NMR solution studies of four B-DNA dodecamers that together cover 39 base pairs of the ...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi500504y

    authors: Xu X,Ben Imeddourene A,Zargarian L,Foloppe N,Mauffret O,Hartmann B

    更新日期:2014-09-09 00:00:00

  • Ethidium bromide complexes with self-complementary deoxytetranucleotides. Demonstration and discussion of sequence preferences in the intercalative binding of ethidium bromide.

    abstract::The binding of ethidium bromide to the self-complementary deoxytetranucleotides containing guanine and cytosine bases has been studied by circular dichroism, visible absorption, and fluorescence spectroscopies. The circular dichroism spectrum of each of the four deoxytetranucleotides was measured and compared to the s...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi00616a002

    authors: Kastrup RV,Young MA,Krugh TR

    更新日期:1978-11-14 00:00:00

  • Shape and volume of fragments Fab' and (Fab')2 of anti-poly(D-alanyl) antibodies in the presence and absence of tetra-D-alanine as determined by small-angle x-ray scattering.

    abstract::The conformation of two fragments derived from anti-poly(D-alanyl) antibodies, the divalent fragment (Fab')2 and the monovalent fragment Fab', was studied by small-angle X-ray scattering before and after interaction with the tetra-D-alanine amide hapten. More than 90% of the combining sites were occupied by the hapten...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi00677a035

    authors: Pilz I,Kratky O,Licht A,Sela M

    更新日期:1975-03-25 00:00:00

  • O-phosphoserine content of intermediate filament subunits.

    abstract::Purified subunits of intermediate filaments obtained from a variety of tissues and cell types contain O-phosphoserine and, in some cases, smaller amounts of O-phosphothreonine. The O-phosphoserine content was estimated by reaction of performic acid oxidized subunits with methylamine in NaOH. Decamin of BHK-21 and CHO ...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi00530a030

    authors: Steinert PM,Wantz ML,Idler WW

    更新日期:1982-01-05 00:00:00

  • Digestion of RNA of chromatin and nuclear ribonucleoprotein by staphylococcal nuclease.

    abstract::Following a 1-h [3H]uridine pulse of cells of a human colon carcinoma line, 15% of the radioactivity in heterogeneous nuclear RNA associated with both chromatin and nuclear ribonucleoprotein was not digested to acid soluble fragments during a 2-h incubation with staphylococcal nuclease (EC 3.1.4.7). These [3H]uridine-...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi00662a026

    authors: Augenlicht LH,McCormick M,Lipkin M

    更新日期:1976-08-24 00:00:00

  • GTP hydrolysis of cell division protein FtsZ: evidence that the active site is formed by the association of monomers.

    abstract::The essential prokaryotic cell division protein FtsZ is a tubulin homologue that forms a ring at the division site. FtsZ forms polymers in a GTP-dependent manner. Recent biochemical evidence has shown that FtsZ forms multimeric structures in vitro and in vivo and functions as a self-activating GTPase. Structural analy...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi011370i

    authors: Scheffers DJ,de Wit JG,den Blaauwen T,Driessen AJ

    更新日期:2002-01-15 00:00:00

  • Extension of the polarity-dependent "switch phenomenon" of the gp120 binding domain as a target for antiviral chemotherapy.

    abstract::A 15-residue fragment within the major continuous domain of gp120 from HIV-1 that can bind independently to the CD4 receptor has been shown to have the property of behaving as a solvent polarity-dependent conformational switch. The switch behavior (cooperative transition from beta-sheet to helical conformation as a fu...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi952045w

    authors: Graf von Stosch A,Kinzel V,Reed J

    更新日期:1996-01-16 00:00:00

  • A ParE-ParC fusion protein is a functional topoisomerase.

    abstract::Type II topoisomerases are responsible for DNA unlinking during DNA replication and chromosome segregation. Although eukaryotic enzymes are homodimers and prokaryotic enzymes are heterotetramers, both prokaryotic and eukaryotic type II topoisomerases belong to a single protein family. The amino- and carboxyl-terminal ...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi0155201

    authors: Lavasani LS,Hiasa H

    更新日期:2001-07-24 00:00:00

  • Receptor activation by human C5a des Arg74 but not intact C5a is dependent on an interaction between Glu199 of the receptor and Lys68 of the ligand.

    abstract::Despite the expression of only one type of receptor, there is great variation in the ability of different cell types to discriminate between C5a and its more stable metabolite, C5a des Arg74. The mechanism that underlies this phenomenon is not understood but presumably involves differences in the interaction with the ...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi990139q

    authors: Crass T,Bautsch W,Cain SA,Pease JE,Monk PN

    更新日期:1999-07-27 00:00:00

  • Vinca site agents induce structural changes in tubulin different from and antagonistic to changes induced by colchicine site agents.

    abstract::Vinca site agents are antimicrotubule compounds that bind to the same site on tubulin as do the vinca alkaloids. These include agents that induce the formation of nonmicrotubule oligomers of tubulin (vinblastine and vincristine) and agents that do not (maytansine and rhizoxin). All of these quench the fluorescence of ...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi00021a012

    authors: Sackett DL

    更新日期:1995-05-30 00:00:00

  • Interaction of diacylglycerols with phosphatidylcholine vesicles as studied by differential scanning calorimetry and fluorescence probe depolarization.

    abstract::Mixtures of 1,2-dipalmitoylglycerol (1,2-DPG), 1,2-dioleylglycerol (1,2-DOG), 1,2-dicapryloylglycerol (1,2-DCG), 1,3-dioleylglycerol (1,3-DOG), and 1,3-dicapryloylglycerol (1,3-DCG) with dipalmitoylphosphatidylcholine (DPPC) have been studied by means of differential scanning calorimetry (DSC) and fluorescence depolar...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi00425a022

    authors: Ortiz A,Villalaín J,Gómez-Fernández JC

    更新日期:1988-12-13 00:00:00

  • Spectra, membrane binding, and potentiometric responses of new charge shift probes.

    abstract::The properties of a series of new potentiometric membrane probes have been explored. The probes all contain an (aminostyryl)pyridinium chromophore or a more highly conjugated analogue. The spectral properties of the dyes are discussed in terms of the excitation-induced charge shift from the pyridine to the aniline; th...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi00342a010

    authors: Fluhler E,Burnham VG,Loew LM

    更新日期:1985-10-08 00:00:00

  • Calcium and membrane-binding properties of monomeric and multimeric annexin II.

    abstract::The calcium-dependent interaction of several annexins with membranes was studied. A novel technique was developed that allowed estimation of calcium binding to aggregating systems. This consisted of immobilized phospholipids on phenyl-Sepharose. Proteins associated with this affinity gel in the presence of radioactive...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi00249a009

    authors: Evans TC Jr,Nelsestuen GL

    更新日期:1994-11-15 00:00:00

  • Crystal structure of Escherichia coli penicillin-binding protein 5 bound to a tripeptide boronic acid inhibitor: a role for Ser-110 in deacylation.

    abstract::Penicillin-binding protein 5 (PBP 5) from Escherichia coli is a well-characterized d-alanine carboxypeptidase that serves as a prototypical enzyme to elucidate the structure, function, and catalytic mechanism of PBPs. A comprehensive understanding of the catalytic mechanism underlying d-alanine carboxypeptidation and ...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi0473004

    authors: Nicola G,Peddi S,Stefanova M,Nicholas RA,Gutheil WG,Davies C

    更新日期:2005-06-14 00:00:00

  • Mapping a ketosynthase:acyl carrier protein binding interface via unnatural amino acid-mediated photo-cross-linking.

    abstract::Probing and interrogating protein interactions that involve acyl carrier proteins (ACP's) in fatty acid synthases and polyketide synthases are critical to understanding the molecular basis for the programmed assembly of complex natural products. Here, we have used unnatural amino acid mutagenesis to site specifically ...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi500936u

    authors: Ye Z,Williams GJ

    更新日期:2014-12-09 00:00:00

  • Molecular cloning and developmental expression of the caveolin gene family in the amphibian Xenopus laevis.

    abstract::Caveolae are approximately 50-100 nm invaginations of the plasma membrane thought to form as a result of a local accumulation of cholesterol, sphingolipids, and a unique family of three proteins known as the caveolins: Cav-1, -2, and -3. Here, we report the identification, sequence, and developmental expression of the...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi020043n

    authors: Razani B,Park DS,Miyanaga Y,Ghatpande A,Cohen J,Wang XB,Scherer PE,Evans T,Lisanti MP

    更新日期:2002-06-25 00:00:00