Abstract:
:Signaling pathways in all organisms consist of series of phosphorylation and dephosphorylation events that define directionality and allow different levels of feedback-regulation. Mass spectrometry-based proteomic analyses in recent years have led to a proteome-wide identification of thousands of phosphorylation sites in various plant species. Given this magnitude of mostly qualitative information about protein phosphorylation, discovery of specific phosphoproteins with regulatory functions represents a major challenge. In future large-scale experiments, combinations of data-driven modeling strategies based on quantitative data, targeted kinase-substrate screens, and verification in biochemical and genetic experiments are required to specifically spot phosphorylation sites with specific roles in signaling pathway modulation.
journal_name
Curr Opin Plant Bioljournal_title
Current opinion in plant biologyauthors
Schulze WXdoi
10.1016/j.pbi.2009.12.008subject
Has Abstractpub_date
2010-06-01 00:00:00pages
280-87issue
3eissn
1369-5266issn
1879-0356pii
S1369-5266(10)00002-6journal_volume
13pub_type
杂志文章,评审abstract::Plant cells sense, weigh and integrate various endogenous and exogenous cues in order to optimize acclimation and resource allocation. The thiol/disulfide redox network appears to be in the core of this versatile integration process. In plant cells its complexity exceeds by far that of other organisms. Recent research...
journal_title:Current opinion in plant biology
pub_type: 杂志文章,评审
doi:10.1016/j.pbi.2011.12.002
更新日期:2012-06-01 00:00:00
abstract::Plant-infecting viruses cause significant crop losses around the world and the majority of emerging threats to crop production have a viral etiology. Significant progress has been made and continues to be made in understanding how viruses induce disease and overcome some forms of resistance-particularly resistance bas...
journal_title:Current opinion in plant biology
pub_type: 杂志文章,评审
doi:10.1016/j.pbi.2013.06.004
更新日期:2013-08-01 00:00:00
abstract::Zinc is an essential micronutrient. Genes responsible for zinc uptake have now been identified from yeast and plants. These genes belong to an extended family of cation transporters called the ZIP gene family. Zinc efflux genes that belong to another transporter family, the CDF family, have also been identified in yea...
journal_title:Current opinion in plant biology
pub_type: 杂志文章,评审
doi:10.1016/s1369-5266(99)80042-9
更新日期:1999-06-01 00:00:00
abstract::Recent studies indicate that, in a manner similar to classical plant hormones, sugars can act as signaling molecules that control gene expression and developmental processes in plants. Crucial evidence includes uncoupling glucose signaling from its metabolism, identification of glucose sensors, and isolation and chara...
journal_title:Current opinion in plant biology
pub_type: 杂志文章,评审
doi:10.1016/s1369-5266(99)00014-x
更新日期:1999-10-01 00:00:00
abstract::Membraneless compartments are formed from the dynamic physical association of proteins and RNAs through liquid-liquid phase separation, and have recently emerged as an exciting new mechanism to explain the dynamic organization of biochemical processes in the cell. In this review, we provide an overview of the current ...
journal_title:Current opinion in plant biology
pub_type: 杂志文章,评审
doi:10.1016/j.pbi.2018.05.005
更新日期:2018-10-01 00:00:00
abstract::A series of papers in the last year reported major advances in our understanding of abscisic acid (ABA) signaling: the identification of soluble ABA receptors, the elucidation of a core ABA signaling pathway and structural insights into the mechanism of ABA perception and signaling. Here we summarize these advances, w...
journal_title:Current opinion in plant biology
pub_type: 杂志文章,评审
doi:10.1016/j.pbi.2010.09.007
更新日期:2010-10-01 00:00:00
abstract::Karrikins are butenolides in smoke and char that stimulate seed germination. Karrikin action in Arabidopsis requires the F-box protein MAX2 and the α/β-hydrolase KAI2, a paralogue of D14 that is required for perception of strigolactones (SL). SL response involves hydrolysis by D14, whereas karrikins bind to KAI2 witho...
journal_title:Current opinion in plant biology
pub_type: 杂志文章,评审
doi:10.1016/j.pbi.2013.07.005
更新日期:2013-10-01 00:00:00
abstract::Recent advances in DNA targeting allow unprecedented control over gene function and expression. Targeting based on TAL effectors is arguably the most promising for systems biology and metabolic engineering. Multiple, orthogonal TAL-effector reagents of different types can be used in the same cell. Furthermore, variati...
journal_title:Current opinion in plant biology
pub_type: 杂志文章
doi:10.1016/j.pbi.2014.05.007
更新日期:2014-06-01 00:00:00
abstract::Quantification of genotype-to-phenotype associations is central to many scientific investigations, yet the ability to obtain consistent results may be thwarted without appropriate statistical analyses. Models for association can consider confounding effects in the materials and complex genetic interactions. Selecting ...
journal_title:Current opinion in plant biology
pub_type: 杂志文章,评审
doi:10.1016/j.pbi.2015.02.010
更新日期:2015-04-01 00:00:00
abstract::Developmental plasticity is a defining feature of plants allowing them to colonize a wide range of different ecosystems by promoting environmental adaptation. Their postembryonic development requires life-long maintenance of stem cells, which are embedded into specialized tissues, called meristems. The shoot apical me...
journal_title:Current opinion in plant biology
pub_type: 杂志文章,评审
doi:10.1016/j.pbi.2016.11.014
更新日期:2017-02-01 00:00:00
abstract::The green plants (Viridiplantae) are an essential kingdom of life, responsible via photosynthesis for the majority of global primary production, and directly utilized by humankind for nutrition, animal feed, fuel, clothing, medicine and other purposes. There are an estimated 391 000 species of land plants, in addition...
journal_title:Current opinion in plant biology
pub_type: 杂志文章,评审
doi:10.1016/j.pbi.2018.11.001
更新日期:2019-04-01 00:00:00
abstract::Growth of fungal hyphae is guided by a variety of chemical gradients, including nutrients, mating pheromones or host compounds. Over 100 years after chemotropism was first reported in fungus-plant interactions, our knowledge on the host signals, fungal receptors and cellular pathways is still rudimentary. Genetic anal...
journal_title:Current opinion in plant biology
pub_type: 杂志文章,评审
doi:10.1016/j.pbi.2015.07.004
更新日期:2015-08-01 00:00:00
abstract::Growth and development of plants are driven by the continuous production of new cells at the meristems; hence, it is of pivotal importance for plants to precisely regulate the timing and extent of cell proliferation. Although over the past decades the molecular components underlying cell cycle progression have been th...
journal_title:Current opinion in plant biology
pub_type: 杂志文章,评审
doi:10.1016/j.pbi.2014.09.012
更新日期:2015-02-01 00:00:00
abstract::Although cytokinin plays a central role in plant development, our knowledge of the biosynthesis, distribution, perception and signal transduction of cytokinin is limited. Recent molecular-genetic studies have, however, implicated involvement of a two-component system in cytokinin signal transduction. Furthermore, new ...
journal_title:Current opinion in plant biology
pub_type: 杂志文章,评审
doi:10.1016/s1369-5266(98)80263-x
更新日期:1998-10-01 00:00:00
abstract::In contrast to animals, gametes in plants form a separate haploid generation, the gametophyte. The female gametophyte of flowering plants consists of just four different cell types that play distinct roles in the reproductive process. Differentiation of the distinct cell fates is tightly controlled and appears to foll...
journal_title:Current opinion in plant biology
pub_type: 杂志文章,评审
doi:10.1016/j.pbi.2007.07.011
更新日期:2007-12-01 00:00:00
abstract::Apoptotic cell death in animals is regulated by cysteine proteinases called caspases. Recently, vacuolar processing enzyme (VPE) was identified as a plant caspase. VPE deficiency prevents cell death during hypersensitive response and cell death of limited cell layers at the early stage of embryogenesis. Because plants...
journal_title:Current opinion in plant biology
pub_type: 杂志文章,评审
doi:10.1016/j.pbi.2005.05.016
更新日期:2005-08-01 00:00:00
abstract::Reactive oxygen species (ROS) play a key signal transduction role in cells. They are involved in the regulation of growth, development, responses to environmental stimuli and cell death. The level of ROS in cells is determined by interplay between ROS producing pathways and ROS scavenging mechanisms, part of the ROS g...
journal_title:Current opinion in plant biology
pub_type: 杂志文章,评审
doi:10.1016/j.pbi.2011.07.014
更新日期:2011-12-01 00:00:00
abstract::The genome of the plastid has generated much interest as a target for plant transformation. The characteristics of plastid transgenes both reflect the prokaryotic origin of plastid organelles and provide a unique set of features that are currently lacking in genes introduced into the plant nucleus. Recent progress has...
journal_title:Current opinion in plant biology
pub_type: 杂志文章,评审
doi:10.1016/s1369-5266(00)00153-9
更新日期:2001-04-01 00:00:00
abstract::Considerable interest in lignin biosynthesis has been fueled by the many roles that lignin plays in development and in resistance to biotic and abiotic stress, as well as its importance to industry and agriculture. Although the pathway leading to the lignin polymer has been studied for decades, new insights into the e...
journal_title:Current opinion in plant biology
pub_type: 杂志文章,评审
doi:10.1016/s1369-5266(02)00257-1
更新日期:2002-06-01 00:00:00
abstract::The pan-tropical wild relatives of rice grow in a wide variety of habitats: forests, savanna, mountainsides, rivers and lakes. The completion of the sequencing of the rice nuclear and cytoplasmic genomes affords an opportunity to widen our understanding of the genomes of the genus Oryza. Research on the Oryza genus ha...
journal_title:Current opinion in plant biology
pub_type: 杂志文章,评审
doi:10.1016/s1369-5266(03)00009-8
更新日期:2003-04-01 00:00:00
abstract::Suberized cell walls form physiologically important plant-environment interfaces because they act as barriers that limit water and nutrient transport and protect plants from invasion by pathogens. Plants respond to environmental stimuli by modifying the degree of suberization in root cell walls. Salt stress or drought...
journal_title:Current opinion in plant biology
pub_type: 杂志文章,评审
doi:10.1016/j.pbi.2007.04.004
更新日期:2007-06-01 00:00:00
abstract::SUMOylation is an essential post-translational modification that affects several cellular processes, from gene replication to stress response. Studies using the SUMO (de)conjugation machinery have provided evidence regarding its potential to improve crop performance and productivity under normal and adverse conditions...
journal_title:Current opinion in plant biology
pub_type: 杂志文章,评审
doi:10.1016/j.pbi.2019.04.009
更新日期:2019-06-01 00:00:00
abstract::Mechanisms that mediate the control of flowering time have been accessed through a molecular genetic approach in Arabidopsis. Flowering is regulated by different pathways and, in the past year, all of the known components of the so-called autonomous pathway have been identified. The autonomous pathway comprises a comb...
journal_title:Current opinion in plant biology
pub_type: 杂志文章,评审
doi:10.1016/j.pbi.2004.07.002
更新日期:2004-10-01 00:00:00
abstract::With a size approximating that of the human genome, the maize genome is about to become the largest plant genome yet sequenced. Contributing to that size are a whole-genome duplication event and a retrotransposition explosion that produced a large amount of repetitive DNA. This DNA is greatly under-represented in cDNA...
journal_title:Current opinion in plant biology
pub_type: 杂志文章,评审
doi:10.1016/j.pbi.2006.01.009
更新日期:2006-04-01 00:00:00
abstract::Changes in gene expression during systemic acquired resistance (SAR) require the phenolic signaling molecule salicylic acid (SA) and are modulated by the interaction between the NON EXPRESSOR OF PATHOGENESIS-RELATED GENES1 (NPR1) protein and members of the TGA family of transcription factors. In the past two years, th...
journal_title:Current opinion in plant biology
pub_type: 杂志文章,评审
doi:10.1016/j.pbi.2005.05.003
更新日期:2005-08-01 00:00:00
abstract::Innate defense in wild plant populations is an invaluable resource for understanding how sustainable disease control can be achieved in crops through research that is rooted in molecular and evolutionary biology. Much progress has been made from molecular research into pathogen detection and defense induction. Bacteri...
journal_title:Current opinion in plant biology
pub_type: 杂志文章,评审
doi:10.1016/j.pbi.2006.05.011
更新日期:2006-08-01 00:00:00
abstract::The ubiquitin proteasome system is a key regulator of many biological processes in all eukaryotes. This mechanism employs several types of enzymes, the most important of which are the ubiquitin E3 ligases that catalyse the attachment of polyubiquitin chains to target proteins for their subsequent degradation by the 26...
journal_title:Current opinion in plant biology
pub_type: 杂志文章,评审
doi:10.1016/j.pbi.2006.09.003
更新日期:2006-12-01 00:00:00
abstract::Progress has been made toward understanding the biosynthesis and modifications of the cellulose and the hemicellulose/pectin matrix of woody cell walls (and hence wood properties) by identifying 1600 carbohydrate active enzymes (CAZYmes) in Populus, and pinpointing key candidates involved in various developmental stag...
journal_title:Current opinion in plant biology
pub_type: 杂志文章,评审
doi:10.1016/j.pbi.2008.03.003
更新日期:2008-06-01 00:00:00
abstract::The arbuscular mycorrhiza (AM) is a symbiosis between most terrestrial plants and fungi of the ancient phylum Glomeromycota. AM improves the uptake of water and mineral nutrients, such as phosphorus (P) and nitrogen (N), of the host plant in exchange for photosynthetically fixed carbon. Successful colonization and a f...
journal_title:Current opinion in plant biology
pub_type: 杂志文章,评审
doi:10.1016/j.pbi.2009.06.001
更新日期:2009-08-01 00:00:00
abstract::The phytohormones gibberellin (GA) and abscisic acid (ABA) play essential and often antagonistic roles in regulating plant growth, development and stress responses. The long-awaited identification of receptors for both GA and ABA has shed light upon the initial events that surround the perception of these two phytohor...
journal_title:Current opinion in plant biology
pub_type: 杂志文章,评审
doi:10.1016/j.pbi.2006.07.007
更新日期:2006-10-01 00:00:00