Two dnaB genes are associated with the origin of replication of pQBR55, an exogenously isolated plasmid from the rhizosphere of sugar beet.

abstract：:A total of 39 phenol- and p-cresol-degraders isolated from the river water continuously polluted with phenolic compounds of oil shale leachate were studied. Species identification by BIOLOG GN analysis revealed 21 strains of Pseudomonas fluorescens (4, 8 and 9 of biotypes A, C and G, respectively), 12 of Pseudomonas m...

journal_title：FEMS microbiology ecology

authors： Heinaru E,Truu J,Stottmeister U,Heinaru A

更新日期：2000-03-01 00:00:00

abstract：:Although experiments indicate that the abiotic environment plays an important role in bacterial interactions with their parasitic viruses (bacteriophages or phages), it is not yet clear how exposure to compounds present in nature alters the impact of phages on bacterial growth and evolution. To address this question, ...

journal_title：FEMS microbiology ecology

authors： Scanlan PD,Bischofberger AM,Hall AR

更新日期：2017-01-01 00:00:00

abstract：:Anthropogenic-derived sources of selection are typically implicated as mechanisms for maintaining antibiotic resistance in the environment. Here we report an additional mechanism for maintaining antibiotic resistance in the environment through bacterial exposure to metals. Using a culture-independent approach, bacteri...

journal_title：FEMS microbiology ecology

authors： Wright MS,Loeffler Peltier G,Stepanauskas R,McArthur JV

更新日期：2006-11-01 00:00:00

abstract：:Terrestrial sites contaminated with 2,4,6-trinitrotoluene (TNT) are a widespread and persistent problem and often contain non-vegetated areas with TNT concentrations well in excess of 1000 mg kg(-1). In this study, we examined the effect of TNT on denitrification activity in field soils, and compared the sensitivity o...

journal_title：FEMS microbiology ecology

authors： Siciliano SD,Roy R,Greer CW

更新日期：2000-04-01 00:00:00

abstract：:Molecular and culture based methods were used to survey endolithic, photosynthetic communities from hot spring-formed travertine rocks of various ages, ranging from<10 to greater than 300,000 years. Much of this travertine contained a 1-3-mm-thick greenish band composed mainly of cyanobacteria 1-5 mm below the rock su...

journal_title：FEMS microbiology ecology

authors： Norris TB,Castenholz RW

更新日期：2006-09-01 00:00:00

abstract：:The gut microbiota of insects contributes positively to the physiology of its host mainly by participating in food digestion, protecting against pathogens, or provisioning vitamins or amino acids, but the dynamics of this complex ecosystem is not well understood so far. In this study, we have characterized the gut mic...

journal_title：FEMS microbiology ecology

authors： Pérez-Cobas AE,Maiques E,Angelova A,Carrasco P,Moya A,Latorre A

更新日期：2015-04-01 00:00:00

abstract：:Butyrate-producing bacteria are promising probiotic candidates to target microbial dysbiosis in gastrointestinal disorders like inflammatory bowel diseases. Butyricicoccus pullicaecorum 25-3(T), a butyrate-producing clostridial cluster IV strain, is such a candidate. Little is known about its abundance in the colon mi...

journal_title：FEMS microbiology ecology

authors： Geirnaert A,Wang J,Tinck M,Steyaert A,Van den Abbeele P,Eeckhaut V,Vilchez-Vargas R,Falony G,Laukens D,De Vos M,Van Immerseel F,Raes J,Boon N,Van de Wiele T

更新日期：2015-06-01 00:00:00

abstract：:Although most chitons (Mollusca: Polyplacophora) are shallow-water molluscs, diverse species also occur in deep-sea habitats. We investigated the feeding strategies of two species, Leptochiton boucheti and Nierstraszella lineata, recovered on sunken wood sampled in the western Pacific, close to the Vanuatu Islands. Th...

journal_title：FEMS microbiology ecology

authors： Duperron S,Pottier MA,Léger N,Gaudron SM,Puillandre N,Le Prieur S,Sigwart JD,Ravaux J,Zbinden M

更新日期：2013-03-01 00:00:00

abstract：:Low-molecular-weight organic compounds in root exudates play a key role in plant-microorganism interactions by influencing the structure and function of soil microbial communities. Model exudate solutions, based on organic acids (OAs) (quinic, lactic, maleic acids) and sugars (glucose, sucrose, fructose), previously i...

journal_title：FEMS microbiology ecology

authors： Shi S,Richardson AE,O'Callaghan M,DeAngelis KM,Jones EE,Stewart A,Firestone MK,Condron LM

更新日期：2011-09-01 00:00:00

abstract：:Biological oxidation of CH(4) is an important constraint on the emission of this gas from areas, such as landfills to the atmosphere. We studied the effect of temperature on methanotrophic bacteria in three different landfill cover soils, incubated in the laboratory. In samples of a young cover, consisting of wood chi...

journal_title：FEMS microbiology ecology

authors： Börjesson G,Sundh I,Svensson B

更新日期：2004-06-01 00:00:00

abstract：:Molecular bacterial community composition was characterized from three geographically distinct spacecraft-associated clean rooms to determine whether such populations are influenced by the surrounding environment or the maintenance of the clean rooms. Samples were collected from facilities at the Jet Propulsion Labora...

journal_title：FEMS microbiology ecology

authors： Moissl C,Osman S,La Duc MT,Dekas A,Brodie E,DeSantis T,Venkateswaran K

更新日期：2007-09-01 00:00:00

abstract：:The response of sulfate reducing bacteria (SRB) to oxygen stress under oligotrophic conditions in particle-free systems was studied in (i) sterile Berlin drinking water; (ii) mineral medium; and (iii) in coculture experiments with aerobic bacteria. Using a polyphasic approach including anaerobic cultivation, fluoresce...

journal_title：FEMS microbiology ecology

authors： Bade K,Manz W,Szewzyk U

更新日期：2000-06-01 00:00:00

abstract：:A large number of antibiotic-resistant P. aeruginosa isolates are continuously discharged into natural water basins mainly through sewage. However, the environmental reservoirs of antibiotic resistance factors are poorly understood. In this study, the antibiotic resistance patterns of 245 isolates from various aquatic...

journal_title：FEMS microbiology ecology

authors： Olga P,Apostolos V,Alexis G,George V,Athena M

更新日期：2016-05-01 00:00:00

abstract：:As water is a source of nosocomial infections in hospitals, the presence of fastidious Gram-negative bacteria in water samples taken in a university hospital was investigated. Water samples were inoculated onto agar plates and into amoebal microplates for co-culture. Sixty-eight alpha proteobacteria isolates were obta...

journal_title：FEMS microbiology ecology

authors： La Scola B,Barrassi L,Raoult D

更新日期：2000-12-01 00:00:00

abstract：:The bias of widely used degenerate nifH-specific primer sets was first tested using denaturing gradient gel electrophoresis (DGGE), and their application for profiling of complex communities assessed for roots of Oryza longistaminata. When primers (P) with mismatches at nondegenerate positions were used on genomic DNA...

journal_title：FEMS microbiology ecology

authors： Demba Diallo M,Reinhold-Hurek B,Hurek T

更新日期：2008-08-01 00:00:00

abstract：:Bacteriophages are ubiquitous in various environments. Our previous study revealed the diversity of the cyanophage community in paddy floodwater. In this study, the phylogeny and genetic diversity of cyanophage communities in paddy field soils were reported. The viral capsid assembly protein gene (g20) of cyanophage w...

journal_title：FEMS microbiology ecology

authors： Wang G,Asakawa S,Kimura M

更新日期：2011-05-01 00:00:00

abstract：:We present a method for the rapid and simple extraction of DNA from marine sediments using electroelution. It effectively separates DNA from compounds, including humic substances, that interfere with subsequent DNA quantification and amplification. After extraction of the DNA from the sediment into an aqueous solution...

journal_title：FEMS microbiology ecology

authors： Kallmeyer J,Smith DC

更新日期：2009-07-01 00:00:00

abstract：:Lactobacillus reuteri ATCC 55730 is a probiotic strain that produces, in the presence of glycerol, reuterin, a broad-spectrum antimicrobial substance. This strain has been shown to prevent intestinal infections in vivo; however, its mechanisms of action, and more specifically whether reuterin production occurs within ...

journal_title：FEMS microbiology ecology

authors： Cleusix V,Lacroix C,Vollenweider S,Le Blay G

更新日期：2008-01-01 00:00:00

abstract：:The interface between biological and geochemical components in the surface crust of a saline soil was investigated using X-ray diffraction, and variable pressure scanning electron microscopy in combination with energy dispersive X-ray spectrometry. Mineral compounds such as halite and gypsum were identified crystalliz...

journal_title：FEMS microbiology ecology

authors： Canfora L,Vendramin E,Vittori Antisari L,Lo Papa G,Dazzi C,Benedetti A,Iavazzo P,Adamo P,Jungblut AD,Pinzari F

更新日期：2016-06-01 00:00:00

abstract：:Arctic peatlands store large stocks of organic carbon which are vulnerable to the climate change but their fate is uncertain. There is increasing evidence that a part of it will be lost as a result of faster microbial mineralization. We studied the vulnerability of 3500-5900 years old bare peat uplifted from permafros...

journal_title：FEMS microbiology ecology

authors： Diáková K,Čapek P,Kohoutová I,Mpamah PA,Bárta J,Biasi C,Martikainen PJ,Šantrůčková H

更新日期：2016-09-01 00:00:00

abstract：:Extreme acidophiles (microorganisms with pH optima of < 3) can colonize and exploit subterranean environments, such as abandoned metal sulfide mines, that have the potential for developing widespread or isolated pockets of acidity. Although acidophiles can utilize a wide range of electron donors, inorganic materials (...

journal_title：FEMS microbiology ecology

authors： Johnson DB

更新日期：2012-07-01 00:00:00

abstract：:Replant diseases often occur when pome and stone fruits are grown in soil that had previously been planted with the same or similar plant species. They typically lead to reductions in plant growth, crop yield and production duration. In this project, greenhouse assays were used to identify a peach orchard soil that ca...

journal_title：FEMS microbiology ecology

authors： Bent E,Loffredo A,Yang JI,McKenry MV,Becker JO,Borneman J

更新日期：2009-05-01 00:00:00

abstract：:Antarctic soils are known to be oligotrophic and of having low buffering capacities. It is expected that this is particularly the case for inland high-altitude regions. We hypothesized that the bedrock type and the presence of macrobiota in these soils enforce a high selective pressure on their bacterial communities. ...

journal_title：FEMS microbiology ecology

authors： Tytgat B,Verleyen E,Sweetlove M,D'hondt S,Clercx P,Van Ranst E,Peeters K,Roberts S,Namsaraev Z,Wilmotte A,Vyverman W,Willems A

更新日期：2016-09-01 00:00:00

abstract：:In drinking water (DW) and the distribution systems, bacterial growth and biofilm formation have to be controlled both for limiting taste or odour development and preventing clogging or biocorrosion problems. After a contamination with undesired bacteria, factors like nutrient availability and temperature will influen...

journal_title：FEMS microbiology ecology

authors： Van Nevel S,De Roy K,Boon N

更新日期：2013-09-01 00:00:00

abstract：:In disease-suppressive soil, plants rely upon mutualistic associations between roots and specific microbes for nutrient acquisition and disease suppression. Notably, the transmission of suppressiveness by the cysts of sugar beet cyst nematode from suppressive to conducive soils has been previously observed in greenhou...

journal_title：FEMS microbiology ecology

authors： Hussain M,Hamid MI,Tian J,Hu J,Zhang X,Chen J,Xiang M,Liu X

更新日期：2018-10-01 00:00:00

abstract：:Predation and competition are two main factors that determine the size and composition of aquatic bacterial populations. Using a simplified bacterial community, composed of three strains characterized by different responses to predation, a short-term laboratory experiment was performed to evaluate adaptations and rela...

journal_title：FEMS microbiology ecology

authors： Corno G

更新日期：2006-12-01 00:00:00

abstract：:This study analysed the nitrifier community in the biofilter of a zero discharge, recirculating aquaculture system (RAS) for the production of marine shrimp in a low density (low ammonium production) system. The ammonia-oxidizing populations were examined by targeting 16S rRNA and amoA genes of ammonia-oxidizing bacte...

journal_title：FEMS microbiology ecology

authors： Brown MN,Briones A,Diana J,Raskin L

更新日期：2013-01-01 00:00:00

abstract：:Bacterioplankton community structures under contrasting subtropical marine environments (Hong Kong waters) were analyzed using 16S rRNA gene denaturing gradient gel electrophoresis (DGGE) and subsequent sequencing of predominant bands for samples collected bimonthly from 2004 to 2006 at five stations. Generally, bacte...

journal_title：FEMS microbiology ecology

authors： Zhang R,Lau SC,Ki JS,Thiyagarajan V,Qian PY

更新日期：2009-09-01 00:00:00

abstract：:Interactions among microorganisms found in coral mucus can be either symbiotic or competitive. It has been hypothesized that microbial communities found on the surface of coral play a role in coral holobiont defense, possibly through production of antimicrobial substances. Selected microorganisms isolated from the muc...

journal_title：FEMS microbiology ecology

authors： Shnit-Orland M,Kushmaro A

更新日期：2009-03-01 00:00:00

abstract：:Herbivorous fishes play important ecological roles in coral reefs by consuming algae that can otherwise outcompete corals, but we know little about the gut microbiota that facilitates this process. This study focussed on the gut microbiota of an ecologically important coral reef fish, the convict surgeonfish Acanthuru...

journal_title：FEMS microbiology ecology

authors： Parata L,Nielsen S,Xing X,Thomas T,Egan S,Vergés A

更新日期：2020-01-01 00:00:00