Plant root carbohydrates affect growth behaviour of endophytic microfungi.

abstract：:The second step of nitrification, the oxidation of nitrite to nitrate, is vital for the functioning of the nitrogen cycle, but our understanding of the ecological roles of the involved microorganisms is still limited. The known diversity of Nitrospira, the most widely distributed nitrite-oxidizing bacteria, has increa...

journal_title：FEMS microbiology ecology

authors： Nowka B,Off S,Daims H,Spieck E

更新日期：2015-03-01 00:00:00

abstract：:Marine sponges host bacterial communities with important ecological and economic roles in nature and society, yet these benefits depend largely on the stability of host-symbiont interactions and their susceptibility to changing environmental conditions. Here, we investigated the temporal stability of complex host-micr...

journal_title：FEMS microbiology ecology

authors： Erwin PM,Coma R,López-Sendino P,Serrano E,Ribes M

更新日期：2015-10-01 00:00:00

abstract：:Ectomycorrhizal (ECM) fungal communities show temporal dynamics. Such dynamics have been mainly assessed with 1 year of investigations and have been related to the seasonal changes in environment. Recent study in sub-tropical region has revealed that stochastic temporal-based process can affect ECM fungal community, m...

journal_title：FEMS microbiology ecology

authors： Sugiyama Y,Matsuoka S,Osono T

更新日期：2020-07-01 00:00:00

abstract：:Pollution of nearshore waters with disease-causing microorganisms impacts ecosystems health through illness and deaths in people and wildlife, as well as negative socioeconomic consequences of impaired marine resources. Insight on pathogen ecology in coastal habitats is crucial for accurately mitigating inputs and imp...

journal_title：FEMS microbiology ecology

authors： Shapiro K,Silver M,Byrne BA,Berardi T,Aguilar B,Melli A,Smith WA

更新日期：2018-11-01 00:00:00

abstract：:A new fluorescence staining and flow cytometry protocol was developed to monitor several physiological states in biocontrol strain Pseudomonas fluorescens DR54 during storage survival in a stationary-phase culture, preparation of clay carrier for seed formulation, and establishment in a sugar beet spermosphere. The hi...

journal_title：FEMS microbiology ecology

authors： Nielsen TH,Sjøholm OR,Sørensen J

更新日期：2009-03-01 00:00:00

abstract：:Pressure-resistant circulating systems were constructed to enable the investigation of attached and unattached microbial populations under in situ pressure (2.5 MPa), diversity, dissolved gas and chemistry conditions. Three parallel flow cell cabinets were configured to allow observation of the effect on microbial met...

journal_title：FEMS microbiology ecology

authors： Pedersen K

更新日期：2012-07-01 00:00:00

abstract：:Carbon transfer between plants via a common extraradical network of arbuscular mycorrhizal (AM) fungal hyphae has been investigated abundantly, but the results remain equivocal. We studied the transfer of carbon through this fungal network, from a Medicago truncatula donor plant to a receiver (1) M. truncatula plant g...

journal_title：FEMS microbiology ecology

authors： Voets L,Goubau I,Olsson PA,Merckx R,Declerck S

更新日期：2008-08-01 00:00:00

abstract：:Anaerobic ammonium oxidizing (anammox) bacteria are detected in many natural ecosystems and wastewater treatment plants worldwide. This study describes the enrichment of anammox bacteria in the presence of acetate. The results obtained extend the concept that the anammox bacteria can be enriched to high densities in t...

journal_title：FEMS microbiology ecology

authors： Kartal B,van Niftrik L,Rattray J,van de Vossenberg JL,Schmid MC,Sinninghe Damsté J,Jetten MS,Strous M

更新日期：2008-01-01 00:00:00

abstract：:This study was conducted to determine the feasibility of labeling phospholipid-derived fatty acids (PLFA) of an active microbial population with a (13)C-labeled organic substrate in the denitrifying zone of a petroleum hydrocarbon-contaminated aquifer during a single-well push-pull test. Anoxic test solution was prepa...

journal_title：FEMS microbiology ecology

authors： Pombo SA,Pelz O,Schroth MH,Zeyer J

更新日期：2002-09-01 00:00:00

abstract：:The advent of next-generation sequencing has allowed huge amounts of DNA sequence data to be produced, advancing the capabilities of microbial ecosystem studies. The current challenge is to identify from which microorganisms and genes the DNA originated. Several tools and databases are available for annotating DNA seq...

journal_title：FEMS microbiology ecology

authors： Randle-Boggis RJ,Helgason T,Sapp M,Ashton PD

更新日期：2016-07-01 00:00:00

abstract：:We present an individual-based experimental framework to identify and estimate the main parameters governing bacterial conjugation at the individual cell scale. From this analysis, we have established that transient periods of unregulated plasmid transfer within newly formed transconjugant cells, together with contact...

journal_title：FEMS microbiology ecology

authors： Seoane J,Yankelevich T,Dechesne A,Merkey B,Sternberg C,Smets BF

更新日期：2011-01-01 00:00:00

abstract：:The molecular diversity and community structure of bacteria from the gut of the termite Reticulitermes speratus were analyzed by the sequencing of near-full-length 16S rRNA genes, amplified by polymerase chain reaction. The results of the analysis of 1344 clones indicated a predominance of spirochetes in the gut. Spir...

journal_title：FEMS microbiology ecology

authors： Hongoh Y,Ohkuma M,Kudo T

更新日期：2003-05-01 00:00:00

abstract：:Fifty-six mercury-resistant (Hg(R)) Bacillus strains were isolated from natural environments at various sites of the world. Southern hybridisation and polymerase chain reaction (PCR) analysis showed that 21 of the 56 isolates have closely related or identical mer operons to that of Bacillus megaterium MB1. These 21 is...

journal_title：FEMS microbiology ecology

authors： Narita M,Matsui K,Huang CC,Kawabata Z,Endo G

更新日期：2004-04-01 00:00:00

abstract：:Truffles are hypogeous ectomycorrhizal fungi. They belong to the genus Tuber and are currently considered a hot spot in fungal biology due to their ecological and economic relevance. Among all the species, Tuber magnatum is the most appreciated because of its special taste and aroma. The aim of this work was to set up...

journal_title：FEMS microbiology ecology

authors： Zampieri E,Murat C,Cagnasso M,Bonfante P,Mello A

更新日期：2010-01-01 00:00:00

abstract：:The Pseudomonas genus, which includes environmental and pathogenic species, is known to present antibiotic resistances, and can receive resistance genes from multi-resistant enteric bacteria released into the environment via faecal rejects. This study was aimed to investigate the resistome of Pseudomonas populations t...

journal_title：FEMS microbiology ecology

authors： Camiade M,Bodilis J,Chaftar N,Riah-Anglet W,Gardères J,Buquet S,Ribeiro AF,Pawlak B

更新日期：2020-02-01 00:00:00

abstract：:Anaerobic fungi (Neocallimastigales) are active degraders of fibrous plant material in the rumen. However, only limited information is available relating to how quickly they colonize ingested feed particles. The aim of this study was to determine the dynamics of initial colonization of forage by anaerobic fungi in the...

journal_title：FEMS microbiology ecology

authors： Edwards JE,Kingston-Smith AH,Jimenez HR,Huws SA,Skøt KP,Griffith GW,McEwan NR,Theodorou MK

更新日期：2008-12-01 00:00:00

abstract：:Primary succession after glacier retreat has been widely studied in plant communities, but bacterial succession is still poorly understood. In particular, few studies of microbial succession have been performed in the Arctic. We investigated the shifts in bacterial community structure and soil physicochemical properti...

journal_title：FEMS microbiology ecology

authors： Kim M,Jung JY,Laffly D,Kwon HY,Lee YK

更新日期：2017-01-01 00:00:00

abstract：:Bacteriophages are ubiquitous in various environments. Our previous study revealed the diversity of the cyanophage community in paddy floodwater. In this study, the phylogeny and genetic diversity of cyanophage communities in paddy field soils were reported. The viral capsid assembly protein gene (g20) of cyanophage w...

journal_title：FEMS microbiology ecology

authors： Wang G,Asakawa S,Kimura M

更新日期：2011-05-01 00:00:00

abstract：:Elevated atmospheric carbon dioxide concentrations ([CO(2) ]) might change the abundance and the function of soil microorganisms in the depth profile of agricultural soils by plant-mediated reactions. The seasonal pattern of abundance and activity of nitrate-reducing bacteria was studied in a Mini-FACE experiment plan...

journal_title：FEMS microbiology ecology

authors： Marhan S,Philippot L,Bru D,Rudolph S,Franzaring J,Högy P,Fangmeier A,Kandeler E

更新日期：2011-05-01 00:00:00

abstract：:Plants may serve as reservoirs for human-associated bacteria (H-AB) in long-term space missions containing bioregenerative life support systems. The current study examined the abilities of five human-associated potential pathogens, Pseudomonas aeruginosa, Pseudomonas cepacia, Staphylococcus aureus, Streptococcus pyoge...

journal_title：FEMS microbiology ecology

authors： Morales A,Garland JL,Lim DV

更新日期：1996-07-01 00:00:00

abstract：:Photosynthetic picoeukaryotes (PPEs) are major oceanic primary producers. However, the diversity of such communities remains poorly understood, especially in the northwestern (NW) Pacific. We investigated the abundance and diversity of PPEs, and recorded environmental variables, along a transect from the coast to the ...

journal_title：FEMS microbiology ecology

authors： Choi DH,An SM,Chun S,Yang EC,Selph KE,Lee CM,Noh JH

更新日期：2016-02-01 00:00:00

abstract：:Using different techniques of molecular biology we investigated the bacterial diversity of the chemocline of the meromictic Lake Cadagno. Cloning of a total community 16S rDNA PCR product and subsequent screening with a combination of amplified ribosomal DNA restriction analysis and temporal temperature gradient gel e...

journal_title：FEMS microbiology ecology

authors： Bosshard PP,Santini Y,Grüter D,Stettler R,Bachofen R

更新日期：2000-02-01 00:00:00

abstract：:The presence and in vitro expression of homologues to 22 bacterial human virulence determinants amongst culturable soil bacteria were investigated. About 25% of the bacterial isolates contained virulence gene homologues representing toxin (hblA, cytK2), adhesin (fimH), regulator (phoQ) and resistance (yfbI) determinan...

journal_title：FEMS microbiology ecology

authors： Søborg DA,Hendriksen NB,Kroer N

更新日期：2014-11-01 00:00:00

abstract：:Antimicrobial resistance is of global concern. Most antimicrobial use is in agriculture; manures and slurry are especially important because they contain a mix of bacteria, including potential pathogens, antimicrobial resistance genes and antimicrobials. In many countries, manures and slurry are stored, especially ove...

journal_title：FEMS microbiology ecology

authors： Baker M,Hobman JL,Dodd CE,Ramsden SJ,Stekel DJ

更新日期：2016-04-01 00:00:00

abstract：:In eastern Canada, climate change-related warming and increased precipitation may alter winter snow cover, with potential consequences for soil conditions, nitrogen (N) cycling, and microbes. We conducted a 2-year field study aimed at determining the influence of snow removal, snow accumulation, and ambient snow in a ...

journal_title：FEMS microbiology ecology

authors： Brin LD,Goyer C,Zebarth BJ,Burton DL,Chantigny MH

更新日期：2019-07-01 00:00:00

abstract：:The impact of low pathogenic influenza viruses such as subtype H9N2, which infect the respiratory and the gastrointestinal tracts of chickens, on microbial composition are not known. Twenty-day-old specific pathogen-free chickens were assigned to two treatment groups, control (uninfected) and H9N2-infected (challenged...

journal_title：FEMS microbiology ecology

authors： Yitbarek A,Weese JS,Alkie TN,Parkinson J,Sharif S

更新日期：2018-01-01 00:00:00

abstract：:Although efforts have been made the past few years, knowledge on genomic and phenotypic diversity and occurrence of the denitrification ability in Gram-positive bacteria are still fragmentary. Many environmental monitoring approaches have used nir, nor, and nos genes as marker genes for detection of denitrification or...

journal_title：FEMS microbiology ecology

authors： Verbaendert I,Hoefman S,Boeckx P,Boon N,De Vos P

更新日期：2014-07-01 00:00:00

abstract：:Methane emissions from freshwater environments contribute substantially to global warming but are under strong control of aerobic methane-oxidizing bacteria. Recently discovered methane seeps (pockmarks) in freshwater lake sediments have the potential to bypass this control by their strong outgassing activity. Whether...

journal_title：FEMS microbiology ecology

authors： Bornemann M,Bussmann I,Tichy L,Deutzmann J,Schink B,Pester M

更新日期：2016-08-01 00:00:00

abstract：:Bacillus pumilus is a Gram-positive bacterium with a wide range of attributed applications, namely as a plant growth promoting rhizobacteria (PGPR), animal, and human probiotic. However, a rare putative role in human diseases has been reported, namely in food poisoning or as anthrax-like cutaneous infectious agent. Th...

journal_title：FEMS microbiology ecology

authors： Branquinho R,Meirinhos-Soares L,Carriço JA,Pintado M,Peixe LV

更新日期：2014-12-01 00:00:00

abstract：:Subsurface removal of arsenic by injection with oxygenated groundwater has been proposed as a viable technology for obtaining 'safe' drinking water in Bangladesh. While the oxidation of ferrous iron to solid ferric iron minerals, to which arsenic adsorbs, is assumed to be driven by abiotic reactions, metal-cycling mic...

journal_title：FEMS microbiology ecology

authors： Hassan Z,Sultana M,van Breukelen BM,Khan SI,Röling WF

更新日期：2015-04-01 00:00:00