Bayesian calibration of a stochastic kinetic computer model using multiple data sources.

abstract：:We develop a Bayesian nonparametric mixture modeling framework for quantal bioassay settings. The approach is built upon modeling dose-dependent response distributions. We adopt a structured nonparametric prior mixture model, which induces a monotonicity restriction for the dose-response curve. Particular emphasis is ...

journal_title：Biometrics

authors： Fronczyk K,Kottas A

更新日期：2014-03-01 00:00:00

abstract：:The estimation of maternal genetic variances by a multivariate maximum likelihood method is discussed. As an illustration the method is applied to data on Tribolium using a model based on partitioning the maternal genetic effect into additive and dominance components. An alternative model due to Falconer (1965) is als...

journal_title：Biometrics

authors： Thompson R

更新日期：1976-12-01 00:00:00

abstract：:This paper proposes a two-stage phase I-II clinical trial design to optimize dose-schedule regimes of an experimental agent within ordered disease subgroups in terms of the toxicity-efficacy trade-off. The design is motivated by settings where prior biological information indicates it is certain that efficacy will imp...

journal_title：Biometrics

authors： Lin R,Thall PF,Yuan Y

更新日期：2020-03-01 00:00:00

abstract：:Estimating the number of clusters in a data set is a crucial step in cluster analysis. In this article, motivated by the gap method (Tibshirani, Walther, and Hastie, 2001, Journal of the Royal Statistical Society B63, 411-423), we propose the weighted gap and the difference of difference-weighted (DD-weighted) gap met...

journal_title：Biometrics

authors： Yan M,Ye K

更新日期：2007-12-01 00:00:00

abstract：:Moment methods for analyzing repeated binary responses have been proposed by Liang and Zeger (1986, Biometrika 73, 13-22), and extended by Prentice (1988, Biometrics 44, 1033-1048). In their generalized estimating equations (GEE), both Liang and Zeger (1986) and Prentice (1988) estimate the parameters associated with ...

journal_title：Biometrics

authors： Lipsitz SR,Fitzmaurice GM,Orav EJ,Laird NM

更新日期：1994-03-01 00:00:00

abstract：:In this study we are concerned with the construction of confidence intervals for the conditional probability of misallocation associated with Anderson's classification statistics, W. The available methods of computing confidence intervals for the conditional probability are not satisfactory in practice, mainly because...

journal_title：Biometrics

authors： McLachlan GJ

更新日期：1975-03-01 00:00:00

abstract：:In this article, we propose a graphical technique for assessing the goodness-of-fit of a stationary hidden Markov model (HMM). We show that plots of the estimated distribution against the empirical distribution detect lack of fit with high probability for large sample sizes. By considering plots of the univariate and ...

journal_title：Biometrics

authors： MacKay Altman R

更新日期：2004-06-01 00:00:00

abstract：:In biomedical cohort studies for assessing the association between an outcome variable and a set of covariates, usually, some covariates can only be measured on a subgroup of study subjects. An important design question is-which subjects to select into the subgroup to increase statistical efficiency. When the outcome ...

journal_title：Biometrics

authors： Wang L,Williams ML,Chen Y,Chen J

更新日期：2020-03-01 00:00:00

abstract：:In epidemiologic studies of time to an event, mean lifetime is often of direct interest. We propose methods to estimate group- (e.g., treatment-) specific differences in restricted mean lifetime for studies where treatment is not randomized and lifetimes are subject to both dependent and independent censoring. The pro...

journal_title：Biometrics

authors： Zhang M,Schaubel DE

更新日期：2011-09-01 00:00:00

abstract：:We describe a Bayesian quantile regression model that uses a confirmatory factor structure for part of the design matrix. This model is appropriate when the covariates are indicators of scientifically determined latent factors, and it is these latent factors that analysts seek to include as predictors in the quantile ...

journal_title：Biometrics

authors： Burgette LF,Reiter JP

更新日期：2012-03-01 00:00:00

abstract：:ChIP-chip (or ChIP-on-chip) is a technology for isolation and identification of genomic sites occupied by specific DNA-binding proteins in living cells. The ChIP-chip signals can be obtained over the whole genome by tiling arrays, where a peak shape is generally observed around a protein-binding site. In this article,...

journal_title：Biometrics

authors： Zheng M,Barrera LO,Ren B,Wu YN

更新日期：2007-09-01 00:00:00

abstract：:This paper considers the problem of extending the classical moving average models to time series with conditional distributions given by generalized linear models. These models have the advantage of easy construction and estimation. Statistical modelling techniques are also proposed. Some simulation results and an ill...

journal_title：Biometrics

authors： Li WK

更新日期：1994-06-01 00:00:00

abstract：:Bayesian experimental design for a clinical trial involves specifying a utility function that models the purpose of the trial, in this case the selection of patients for a diagnostic test. The best sample of patients is selected by maximizing expected utility. This optimization task poses difficulties due to a high-di...

journal_title：Biometrics

authors： Buzoianu M,Kadane JB

更新日期：2009-09-01 00:00:00

abstract：:Spatial data have become increasingly common in epidemiology and public health research thanks to advances in GIS (Geographic Information Systems) technology. In health research, for example, it is common for epidemiologists to incorporate geographically indexed data into their studies. In practice, however, the spati...

journal_title：Biometrics

authors： Huque MH,Bondell HD,Carroll RJ,Ryan LM

更新日期：2016-09-01 00:00:00

abstract：:We estimate how the effect of antiretroviral treatment depends on the time from HIV-infection to initiation of treatment, using observational data. A major challenge in making inferences from such observational data arises from biases associated with the nonrandom assignment of treatment, for example bias induced by d...

journal_title：Biometrics

authors： Lok JJ,DeGruttola V

更新日期：2012-09-01 00:00:00

abstract：:We propose a generalized linear mixed model to estimate and test marginal effects on titers repeatedly measured by serial dilution assays. The link is log-log and the titer is assumed to follow a gamma distribution. The parameters are estimated by generalized estimating equations. The marginal effects are tested by me...

journal_title：Biometrics

authors： Bloch J,Chavance M

更新日期：1998-06-01 00:00:00

abstract：:In recent years, increasing attention has been devoted to the problem of the stability of multivariable regression models, understood as the resistance of the model to small changes in the data on which it has been fitted. Resampling techniques, mainly based on the bootstrap, have been developed to address this issue....

journal_title：Biometrics

authors： De Bin R,Janitza S,Sauerbrei W,Boulesteix AL

更新日期：2016-03-01 00:00:00

abstract：:This paper focuses on the methodology developed for analyzing a multivariate interval-censored data set from an AIDS observational study. A purpose of the study was to determine the natural history of the opportunistic infection cytomeglovirus (CMV) in an HIV-infected individual. For this observational study, laborato...

journal_title：Biometrics

authors： Goggins WB,Finkelstein DM

更新日期：2000-09-01 00:00:00

abstract：:The situation considered is the prediction of a future observation from a simple exponential survival distribution in a hierarchical Bayes context. It is shown that when the hyperparameters need to be estimated from the data, a sample reuse approach is superior to maximum likelihood and method of moments estimation pr...

journal_title：Biometrics

authors： Geisser S

更新日期：1990-03-01 00:00:00

abstract：:We consider modeling correlated survival data when cluster sizes may be informative to the outcome of interest based on a within-cluster resampling (WCR) approach and a weighted score function (WSF) method. We derive the large sample properties for the WCR estimators under the Cox proportional hazards model. We establ...

journal_title：Biometrics

authors： Cong XJ,Yin G,Shen Y

更新日期：2007-09-01 00:00:00

abstract：:Some covariate-adaptive randomization methods have been used in clinical trials for a long time, but little theoretical work has been done about testing hypotheses under covariate-adaptive randomization until Shao et al. (2010) who provided a theory with detailed discussion for responses under linear models. In this a...

journal_title：Biometrics

authors： Shao J,Yu X

更新日期：2013-12-01 00:00:00

abstract：:Recurrent events data are commonly encountered in medical studies. In many applications, only the number of events during the follow-up period rather than the recurrent event times is available. Two important challenges arise in such studies: (a) a substantial portion of subjects may not experience the event, and (b) ...

journal_title：Biometrics

authors： Diao G,Zeng D,Hu K,Ibrahim JG

更新日期：2019-12-01 00:00:00

abstract：:We present an approach for analyzing internal dependencies in counting processes. This covers the case with repeated events on each of a number of individuals, and more generally, the situation where several processes are observed for each individual. We define dynamic covariates, i.e., covariates depending on the pas...

journal_title：Biometrics

authors： Aalen OO,Fosen J,Weedon-Fekjaer H,Borgan O,Husebye E

更新日期：2004-09-01 00:00:00

abstract：:Estimation of treatment effects in randomized studies is often hampered by possible selection bias induced by conditioning on or adjusting for a variable measured post-randomization. One approach to obviate such selection bias is to consider inference about treatment effects within principal strata, that is, principal...

journal_title：Biometrics

authors： Long DM,Hudgens MG

更新日期：2013-12-01 00:00:00

abstract：:A method is proposed for calculating the probabilities of assignment of a patient to treatments; it involves minimizing a quadratic criterion subject to a balance constraint. The optimal probabilities are very easy to compute. Numerical illustration is given and comparisons are drawn with the entropy-based methods of ...

journal_title：Biometrics

authors： Titterington DM

更新日期：1983-12-01 00:00:00

abstract：:The log-rank test is widely used to compare two survival distributions in a randomized clinical trial, while partial likelihood (Cox, 1975) is the method of choice for making inference about the hazard ratio under the Cox (1972) proportional hazards model. The Wald 95% confidence interval of the hazard ratio may inclu...

journal_title：Biometrics

authors： Lin DY,Dai L,Cheng G,Sailer MO

更新日期：2016-12-01 00:00:00

abstract：:This article is motivated by a lung cancer study where a regression model is involved and the response variable is too expensive to measure but the predictor variable can be measured easily with relatively negligible cost. This situation occurs quite often in medical studies, quantitative genetics, and ecological and ...

journal_title：Biometrics

authors： Chen Z,Wang YG

更新日期：2004-12-01 00:00:00

abstract：:There has been great interest in developing nonlinear structural equation models and associated statistical inference procedures, including estimation and model selection methods. In this paper a general semiparametric structural equation model (SSEM) is developed in which the structural equation is composed of nonpar...

journal_title：Biometrics

authors： Guo R,Zhu H,Chow SM,Ibrahim JG

更新日期：2012-06-01 00:00:00

abstract：:Understanding HIV incidence, the rate at which new infections occur in populations, is critical for tracking and surveillance of the epidemic. In this article, we derive methods for determining sample sizes for cross-sectional surveys to estimate incidence with sufficient precision. We further show how to specify samp...

journal_title：Biometrics

authors： Konikoff J,Brookmeyer R

更新日期：2015-12-01 00:00:00

abstract：:I discuss diagnostic methods for discriminant analysis. The equivalence with linear regression is noted and regression diagnostics are considered. The leverage is a function of the linear discriminant function and the Mahalanobis distance of the observation from the group mean. The distribution of this distance is app...

journal_title：Biometrics

authors： Lachenbruch PA

更新日期：1997-12-01 00:00:00