Siderophore-mediated cooperation and virulence in Pseudomonas aeruginosa.

Abstract:

:Why should organisms cooperate with each other? Helping close relatives that are likely to share the same genes (kin selection) is one important explanation that is likely to apply across taxa. The production of metabolically costly extracellular iron-scavenging molecules (siderophores) by microorganisms is a cooperative behaviour because it benefits nearby conspecifics. We review experiments focusing on the production of the primary siderophore (pyoverdin) of the opportunistic bacterial pathogen, Pseudomonas aeruginosa, which test kin selection theories that seek to explain the evolution of cooperation. First, cooperation is indeed favoured when individuals interact with their close relatives and when there is competition between groups of cooperators and noncooperators, such that the benefit of cooperation can be realized. Second, the relative success of cheats and cooperators is a function of their frequencies within populations. Third, elevated mutation rates can confer a selective disadvantage under conditions when cooperation is beneficial, because high mutation rates reduce how closely bacteria are related to each other. Fourth, cooperative pyoverdin production is also shown to be favoured by kin selection in vivo (caterpillars), and results in more virulent infections. Finally, we briefly outline ongoing and future work using this experimental system.

journal_name

FEMS Microbiol Ecol

authors

Buckling A,Harrison F,Vos M,Brockhurst MA,Gardner A,West SA,Griffin A

doi

10.1111/j.1574-6941.2007.00388.x

subject

Has Abstract

pub_date

2007-11-01 00:00:00

pages

135-41

issue

2

eissn

0168-6496

issn

1574-6941

pii

FEM388

journal_volume

62

pub_type

杂志文章,评审
  • Modification of Escherichia coli-bacteriophage interactions by surfactants and antibiotics in vitro.

    abstract::Although experiments indicate that the abiotic environment plays an important role in bacterial interactions with their parasitic viruses (bacteriophages or phages), it is not yet clear how exposure to compounds present in nature alters the impact of phages on bacterial growth and evolution. To address this question, ...

    journal_title:FEMS microbiology ecology

    pub_type: 杂志文章

    doi:10.1093/femsec/fiw211

    authors: Scanlan PD,Bischofberger AM,Hall AR

    更新日期:2017-01-01 00:00:00

  • Differences between aerobic and anaerobic degradation of microphytobenthic biofilm-derived organic matter within intertidal sediments.

    abstract::Within intertidal sediments, much of the dissolved organic carbon (DOC) consists of carbohydrate-rich extracellular polymeric substances (EPS) produced by microphytobenthic biofilms. EPS are an important source of carbon and energy for aerobic and anaerobic microorganisms owing to burial of microphytobenthos and downw...

    journal_title:FEMS microbiology ecology

    pub_type: 杂志文章

    doi:10.1111/1574-6941.12077

    authors: McKew BA,Dumbrell AJ,Taylor JD,McGenity TJ,Underwood GJ

    更新日期:2013-06-01 00:00:00

  • Control of biogeochemical cycling by mobility and metabolic strategies of microbes in the sediments: an integrated model study.

    abstract::An integrated modeling framework was developed to assess physical, biological and chemical processes in the sediment and at the sediment-water interface. Special focus is laid on the description of different functional groups of bacteria as defined according to their metabolic pathways, including fermentation, methano...

    journal_title:FEMS microbiology ecology

    pub_type: 杂志文章

    doi:10.1016/S0168-6496(03)00196-X

    authors: Wirtz KW

    更新日期:2003-12-01 00:00:00

  • Mathematical modelling of antimicrobial resistance in agricultural waste highlights importance of gene transfer rate.

    abstract::Antimicrobial resistance is of global concern. Most antimicrobial use is in agriculture; manures and slurry are especially important because they contain a mix of bacteria, including potential pathogens, antimicrobial resistance genes and antimicrobials. In many countries, manures and slurry are stored, especially ove...

    journal_title:FEMS microbiology ecology

    pub_type: 杂志文章

    doi:10.1093/femsec/fiw040

    authors: Baker M,Hobman JL,Dodd CE,Ramsden SJ,Stekel DJ

    更新日期:2016-04-01 00:00:00

  • Microbial diversity and biomineralization in low-temperature hydrothermal iron-silica-rich precipitates of the Lau Basin hydrothermal field.

    abstract::Iron-silica-rich low-temperature hydrothermal precipitates were collected from the CDE hydrothermal field located at the East Lau Spreading Center. Phylogenetic analysis showed that the precipitates were dominated by the members of α-proteobacteria and marine group I archaea. Ultrastructural analysis suggested the bac...

    journal_title:FEMS microbiology ecology

    pub_type: 杂志文章

    doi:10.1111/j.1574-6941.2012.01367.x

    authors: Li J,Zhou H,Peng X,Wu Z,Chen S,Fang J

    更新日期:2012-07-01 00:00:00

  • Microbial dynamics and flagellate grazing during transition to winter in Lakes Hoare and Bonney, Antarctica.

    abstract::The planktonic microbial communities of Lakes Hoare and Bonney were investigated during transition into winter. We hypothesized that the onset of darkness induces changes in the functional role of autotrophic and heterotrophic microplankton. Bacteria decreased in Lake Hoare during March-April, while in Lake Bonney bac...

    journal_title:FEMS microbiology ecology

    pub_type: 杂志文章

    doi:10.1111/j.1574-6941.2012.01423.x

    authors: Thurman J,Parry J,Hill PJ,Priscu JC,Vick TJ,Chiuchiolo A,Laybourn-Parry J

    更新日期:2012-11-01 00:00:00

  • Heterogeneity of carbon loss and its temperature sensitivity in East-European subarctic tundra soils.

    abstract::Arctic peatlands store large stocks of organic carbon which are vulnerable to the climate change but their fate is uncertain. There is increasing evidence that a part of it will be lost as a result of faster microbial mineralization. We studied the vulnerability of 3500-5900 years old bare peat uplifted from permafros...

    journal_title:FEMS microbiology ecology

    pub_type: 杂志文章

    doi:10.1093/femsec/fiw140

    authors: Diáková K,Čapek P,Kohoutová I,Mpamah PA,Bárta J,Biasi C,Martikainen PJ,Šantrůčková H

    更新日期:2016-09-01 00:00:00

  • Antibiotic resistance profiles of Pseudomonas aeruginosa isolated from various Greek aquatic environments.

    abstract::A large number of antibiotic-resistant P. aeruginosa isolates are continuously discharged into natural water basins mainly through sewage. However, the environmental reservoirs of antibiotic resistance factors are poorly understood. In this study, the antibiotic resistance patterns of 245 isolates from various aquatic...

    journal_title:FEMS microbiology ecology

    pub_type: 杂志文章

    doi:10.1093/femsec/fiw042

    authors: Olga P,Apostolos V,Alexis G,George V,Athena M

    更新日期:2016-05-01 00:00:00

  • Diversity of RuBisCO and ATP citrate lyase genes in soda lake sediments.

    abstract::Sediments from six soda lakes of the Kulunda Steppe (Altai, Russia) and from hypersaline alkaline lakes of Wadi Natrun (Egypt) were analyzed for the presence of cbb and aclB genes encoding key enzymes Ci assimilation (RuBisCO in Calvin-Benson and ATP citrate lyase in rTCA cycles, respectively). The cbbL gene (RuBisCO ...

    journal_title:FEMS microbiology ecology

    pub_type: 杂志文章

    doi:10.1111/j.1574-6941.2010.00996.x

    authors: Kovaleva OL,Tourova TP,Muyzer G,Kolganova TV,Sorokin DY

    更新日期:2011-01-01 00:00:00

  • Molecular diversity of diazotrophs in oligotrophic tropical seagrass bed communities.

    abstract::Denaturing gradient gel electrophoresis (DGGE) was employed to resolve PCR-amplified nifH sequences from vegetated and unvegetated sediments from two oligotrophic seagrass bed sites on San Salvador Island, Bahamas, in order to assess diazotroph species composition. All DGGE profiles from these sites showed the same pr...

    journal_title:FEMS microbiology ecology

    pub_type: 杂志文章

    doi:10.1111/j.1574-6941.2002.tb00912.x

    authors: Bagwell CE,Rocque JR,Smith GW,Polson SW,Friez MJ,Longshore JW,Lovell CR

    更新日期:2002-02-01 00:00:00

  • Survey of selected antibiotic resistance genes in agricultural and non-agricultural soils in south-central Idaho.

    abstract::Improving our understanding of antibiotic resistance in soils is important for the protection of human, animal and ecological health. In south-central Idaho, antibiotic resistance genes (ARGs) [blaCTX-M-1, erm(B), sul1, tet(B), tet(M) and tet(X)] and a class 1 integron-integrase gene (intI1) were quantified in agricul...

    journal_title:FEMS microbiology ecology

    pub_type: 杂志文章

    doi:10.1093/femsec/fiz071

    authors: Dungan RS,Strausbaugh CA,Leytem AB

    更新日期:2019-06-01 00:00:00

  • Identification of phenol- and p-cresol-producing intestinal bacteria by using media supplemented with tyrosine and its metabolites.

    abstract::To identify intestinal bacteria that produce phenols (phenol and p-cresol), we screened 153 strains within 152 species in 44 genera by culture-based assay using broth media supplemented with 200 µM each of tyrosine and its predicted microbial metabolic intermediates (4-hydroxyphenylpyruvate, DL-4-hydroxyphenyllactate,...

    journal_title:FEMS microbiology ecology

    pub_type: 杂志文章

    doi:10.1093/femsec/fiy125

    authors: Saito Y,Sato T,Nomoto K,Tsuji H

    更新日期:2018-09-01 00:00:00

  • Diverse, yet-to-be-cultured members of the Rubrobacter subdivision of the Actinobacteria are widespread in Australian arid soils.

    abstract::Phylogenetic analyses of ribosomal RNA gene sequences (rDNAs) retrieved from an Australian desert soil sample (Sturt National Park) revealed the presence of a number of clones which branched deeply from the high GC Gram-positive division line of descent. The most abundant group of these clones were related to Rubrobac...

    journal_title:FEMS microbiology ecology

    pub_type: 杂志文章

    doi:10.1111/j.1574-6941.2000.tb00733.x

    authors: Holmes AJ,Bowyer J,Holley MP,O'Donoghue M,Montgomery M,Gillings MR

    更新日期:2000-08-01 00:00:00

  • Examination of Gould's modified S1 (mS1) selective medium and Angle's non-selective medium for describing the diversity of Pseudomonas spp. in soil and root environments.

    abstract::Abstract Studies on the diversity of environmental culturable Pseudomonas populations are dependent on the isolation procedure. This procedure includes the use of selective media which may influence the recovery of strains and thus the diversity described. In this study, we assessed the use of two agar isolation media...

    journal_title:FEMS microbiology ecology

    pub_type: 杂志文章

    doi:10.1016/S0168-6496(03)00130-2

    authors: Tarnawski S,Hamelin J,Locatelli L,Aragno M,Fromin N

    更新日期:2003-07-01 00:00:00

  • Prokaryotic community structure and diversity in the sediments of an active submarine mud volcano (Kazan mud volcano, East Mediterranean Sea).

    abstract::We investigated 16S rRNA gene diversity at a high sediment depth resolution (every 5 cm, top 30 cm) in an active site of the Kazan mud volcano, East Mediterranean Sea. A total of 242 archaeal and 374 bacterial clones were analysed, which were attributed to 38 and 205 unique phylotypes, respectively (> or = 98% similar...

    journal_title:FEMS microbiology ecology

    pub_type: 杂志文章

    doi:10.1111/j.1574-6941.2010.00857.x

    authors: Pachiadaki MG,Lykousis V,Stefanou EG,Kormas KA

    更新日期:2010-06-01 00:00:00

  • A cold-loving crenarchaeon is a substantial part of a novel microbial community in cold sulphidic marsh water.

    abstract::In this paper, we report the identification and first characterization of a novel, cold-loving, prokaryotic community thriving among white-greenish 'streamers' in the cold (c. 10 degrees C) sulphurous water of the marsh Sippenauer Moor near Regensburg, Bavaria, Germany. It consists of the bacterial genus Thiothrix, th...

    journal_title:FEMS microbiology ecology

    pub_type: 杂志文章

    doi:10.1111/j.1574-6941.2006.00088.x

    authors: Koch M,Rudolph C,Moissl C,Huber R

    更新日期:2006-07-01 00:00:00

  • Survival of potentially pathogenic human-associated bacteria in the rhizosphere of hydroponically grown wheat.

    abstract::Plants may serve as reservoirs for human-associated bacteria (H-AB) in long-term space missions containing bioregenerative life support systems. The current study examined the abilities of five human-associated potential pathogens, Pseudomonas aeruginosa, Pseudomonas cepacia, Staphylococcus aureus, Streptococcus pyoge...

    journal_title:FEMS microbiology ecology

    pub_type: 杂志文章

    doi:10.1016/0168-6496(96)00020-7

    authors: Morales A,Garland JL,Lim DV

    更新日期:1996-07-01 00:00:00

  • Extremotolerance in fungi: evolution on the edge.

    abstract::Our planet offers many opportunities for life on the edge: high and low temperatures, high salt concentrations, acidic and basic conditions and toxic environments, to name but a few extremes. Recent studies have revealed the diversity of fungi that can occur in stressful environments that are hostile to most eukaryote...

    journal_title:FEMS microbiology ecology

    pub_type: 杂志文章,评审

    doi:10.1111/j.1574-6941.2009.00794.x

    authors: Gostincar C,Grube M,de Hoog S,Zalar P,Gunde-Cimerman N

    更新日期:2010-01-01 00:00:00

  • Molecular analysis of bacterial microbiota in the gut of the termite Reticulitermes speratus (Isoptera; Rhinotermitidae).

    abstract::The molecular diversity and community structure of bacteria from the gut of the termite Reticulitermes speratus were analyzed by the sequencing of near-full-length 16S rRNA genes, amplified by polymerase chain reaction. The results of the analysis of 1344 clones indicated a predominance of spirochetes in the gut. Spir...

    journal_title:FEMS microbiology ecology

    pub_type: 杂志文章

    doi:10.1016/S0168-6496(03)00026-6

    authors: Hongoh Y,Ohkuma M,Kudo T

    更新日期:2003-05-01 00:00:00

  • Characterization of bacterial communities in lithobionts and soil niches from Victoria Valley, Antarctica.

    abstract::Here we provide the first exploration of microbial diversity from three distinct Victoria Valley edaphic habitats, namely lithobionts (hypoliths, endoliths) and surface soils. Using a combination of terminal restriction fragment length polymorphism (T-RFLP) analysis and 16S rRNA gene amplicon pyrosequencing we assess ...

    journal_title:FEMS microbiology ecology

    pub_type: 杂志文章

    doi:10.1093/femsec/fiw051

    authors: Van Goethem MW,Makhalanyane TP,Valverde A,Cary SC,Cowan DA

    更新日期:2016-04-01 00:00:00

  • High wind speeds prevent formation of a distinct bacterioneuston community in the sea-surface microlayer.

    abstract::The sea-surface microlayer (SML) at the boundary between atmosphere and hydrosphere represents a demanding habitat for bacteria. Wind speed is a crucial but poorly studied factor for its physical integrity. Increasing atmospheric burden of CO2, as suggested for future climate scenarios, may particularly act on this ha...

    journal_title:FEMS microbiology ecology

    pub_type: 杂志文章

    doi:10.1093/femsec/fix041

    authors: Rahlff J,Stolle C,Giebel HA,Brinkhoff T,Ribas-Ribas M,Hodapp D,Wurl O

    更新日期:2017-05-01 00:00:00

  • Arbuscular mycorrhizal dynamics in a chronosequence of Caragana korshinskii plantations.

    abstract::Arbuscular mycorrhizal (AM) fungi in a chronosequence of 5-42-year-old Caragana korshinskii plantations in the semi-arid Loess Plateau region of northwestern China were investigated. AM fungi colonization, spore diversity and PCR-denatured gradient gel electrophoresis-based AM fungal SSU rRNA gene sequences were analy...

    journal_title:FEMS microbiology ecology

    pub_type: 杂志文章

    doi:10.1111/j.1574-6941.2008.00597.x

    authors: Liu Y,He L,An L,Helgason T,Feng H

    更新日期:2009-01-01 00:00:00

  • In vitro suppression of fungi caused by combinations of apparently non-antagonistic soil bacteria.

    abstract::We hypothesized that apparently non-antagonistic soil bacteria may contribute to suppression of fungi during competitive interactions with other bacteria. Four soil bacteria (Brevundimonas sp., Luteibacter sp., Pedobacter sp. and Pseudomonas sp.) that exhibited little or no visible antifungal activity on different aga...

    journal_title:FEMS microbiology ecology

    pub_type: 杂志文章

    doi:10.1111/j.1574-6941.2006.00197.x

    authors: de Boer W,Wagenaar AM,Klein Gunnewiek PJ,van Veen JA

    更新日期:2007-01-01 00:00:00

  • Kinetoplastid flagellates overlooked by universal primers dominate in the oxygenated hypolimnion of Lake Biwa, Japan.

    abstract::Kinetoplastid flagellates, microscopically often detected from various aquatic environments and considered ubiquitous are seldom reported in molecular diversity studies with universal eukaryote DNA primers. To investigate this inconsistency, we examined nanoflagellate diversity in Lake Biwa, Japan by 18S rRNA gene clo...

    journal_title:FEMS microbiology ecology

    pub_type: 杂志文章

    doi:10.1093/femsec/fiv083

    authors: Mukherjee I,Hodoki Y,Nakano S

    更新日期:2015-08-01 00:00:00

  • Investigations of Rhizobium biofilm formation.

    abstract::The development of nitrogen-fixing nodules of the Rhizobium-legume symbiosis, especially the early stages of root hair deformation and curling, infection thread formation, and nodule initiation, has been well studied from a genetic standpoint. In contrast, the factors important for the colonization of surfaces by rhiz...

    journal_title:FEMS microbiology ecology

    pub_type: 杂志文章

    doi:10.1111/j.1574-6941.2005.00044.x

    authors: Fujishige NA,Kapadia NN,De Hoff PL,Hirsch AM

    更新日期:2006-05-01 00:00:00

  • Distinct composition signatures of archaeal and bacterial phylotypes in the Wanda Glacier forefield, Antarctic Peninsula.

    abstract::Several studies have shown that microbial communities in Antarctic environments are highly diverse. However, considering that the Antarctic Peninsula is among the regions with the fastest warming rates, and that regional climate change has been linked to an increase in the mean rate of glacier retreat, the microbial d...

    journal_title:FEMS microbiology ecology

    pub_type: 杂志文章

    doi:10.1093/femsec/fiu005

    authors: Pessi IS,Osorio-Forero C,Gálvez EJ,Simões FL,Simões JC,Junca H,Macedo AJ

    更新日期:2015-01-01 00:00:00

  • Interindividual differences in response to treatment with butyrate-producing Butyricicoccus pullicaecorum 25-3T studied in an in vitro gut model.

    abstract::Butyrate-producing bacteria are promising probiotic candidates to target microbial dysbiosis in gastrointestinal disorders like inflammatory bowel diseases. Butyricicoccus pullicaecorum 25-3(T), a butyrate-producing clostridial cluster IV strain, is such a candidate. Little is known about its abundance in the colon mi...

    journal_title:FEMS microbiology ecology

    pub_type: 杂志文章

    doi:10.1093/femsec/fiv054

    authors: Geirnaert A,Wang J,Tinck M,Steyaert A,Van den Abbeele P,Eeckhaut V,Vilchez-Vargas R,Falony G,Laukens D,De Vos M,Van Immerseel F,Raes J,Boon N,Van de Wiele T

    更新日期:2015-06-01 00:00:00

  • Soil fungal community composition and functional similarity shift across distinct climatic conditions.

    abstract::A large part of ecosystem function in woodland systems depends on soil fungal communities. However, global climate change has the potential to fundamentally alter these communities as fungal species are filtered with changing environmental conditions. In this study, we examined the potential effects of climate on host...

    journal_title:FEMS microbiology ecology

    pub_type: 杂志文章

    doi:10.1093/femsec/fiaa193

    authors: Bui A,Orr D,Lepori-Bui M,Konicek K,Young HS,Moeller HV

    更新日期:2020-12-02 00:00:00

  • Microbial succession in the rhizosphere of live and decomposing barley roots as affected by the antagonistic strain Pseudomonas fluorescens DR54-BN14 or the fungicide imazalil.

    abstract::Abstract The protocol used in the present study was a long-term mesocosm experiment where the microbial succession around live barley roots and subsequent decomposing roots was assessed after seed coating with either the antagonistic strain Pseudomonas fluorescens DR54-BN14 or the fungicide imazalil. Four diversity me...

    journal_title:FEMS microbiology ecology

    pub_type: 杂志文章

    doi:10.1111/j.1574-6941.2003.tb01079.x

    authors: Thirup L,Johansen A,Winding A

    更新日期:2003-04-01 00:00:00

  • Taxonomic and functional metagenomic profiling of gastrointestinal tract microbiome of the farmed adult turbot (Scophthalmus maximus).

    abstract::Metagenomics combined with 16S rRNA gene sequence analyses was applied to unveil the taxonomic composition and functional diversity of the farmed adult turbot gastrointestinal (GI) microbiome. Proteobacteria and Firmicutes which existed in both GI content and mucus were dominated in the turbot GI microbiome. 16S rRNA ...

    journal_title:FEMS microbiology ecology

    pub_type: 杂志文章

    doi:10.1111/1574-6941.12174

    authors: Xing M,Hou Z,Yuan J,Liu Y,Qu Y,Liu B

    更新日期:2013-12-01 00:00:00