Joint models for a primary endpoint and multiple longitudinal covariate processes.

Abstract:

:Joint models are formulated to investigate the association between a primary endpoint and features of multiple longitudinal processes. In particular, the subject-specific random effects in a multivariate linear random-effects model for multiple longitudinal processes are predictors in a generalized linear model for primary endpoints. Li, Zhang, and Davidian (2004, Biometrics60, 1-7) proposed an estimation procedure that makes no distributional assumption on the random effects but assumes independent within-subject measurement errors in the longitudinal covariate process. Based on an asymptotic bias analysis, we found that their estimators can be biased when random effects do not fully explain the within-subject correlations among longitudinal covariate measurements. Specifically, the existing procedure is fairly sensitive to the independent measurement error assumption. To overcome this limitation, we propose new estimation procedures that require neither a distributional or covariance structural assumption on covariate random effects nor an independence assumption on within-subject measurement errors. These new procedures are more flexible, readily cover scenarios that have multivariate longitudinal covariate processes, and can be implemented using available software. Through simulations and an analysis of data from a hypertension study, we evaluate and illustrate the numerical performances of the new estimators.

journal_name

Biometrics

journal_title

Biometrics

authors

Li E,Wang N,Wang NY

doi

10.1111/j.1541-0420.2007.00822.x

subject

Has Abstract

pub_date

2007-12-01 00:00:00

pages

1068-78

issue

4

eissn

0006-341X

issn

1541-0420

pii

BIOM822

journal_volume

63

pub_type

杂志文章
  • An implicitly defined parametric model for censored survival data and covariates.

    abstract::Parametric survival functions are usually defined as explicit functions of time and covariates. However, consideration of some simple differential equations describing certain survival curves leads to a descriptive equation which cannot be explicitly solved for the survival function. Nevertheless, the resulting surviv...

    journal_title:Biometrics

    pub_type: 杂志文章

    doi:

    authors: Piantadosi S,Crowley J

    更新日期:1995-03-01 00:00:00

  • A novel statistical method for modeling covariate effects in bisulfite sequencing derived measures of DNA methylation.

    abstract::Identifying disease-associated changes in DNA methylation can help us gain a better understanding of disease etiology. Bisulfite sequencing allows the generation of high-throughput methylation profiles at single-base resolution of DNA. However, optimally modeling and analyzing these sparse and discrete sequencing data...

    journal_title:Biometrics

    pub_type: 杂志文章

    doi:10.1111/biom.13307

    authors: Zhao K,Oualkacha K,Lakhal-Chaieb L,Labbe A,Klein K,Ciampi A,Hudson M,Colmegna I,Pastinen T,Zhang T,Daley D,Greenwood CMT

    更新日期:2020-05-21 00:00:00

  • Efficient regression analysis with ranked-set sampling.

    abstract::This article is motivated by a lung cancer study where a regression model is involved and the response variable is too expensive to measure but the predictor variable can be measured easily with relatively negligible cost. This situation occurs quite often in medical studies, quantitative genetics, and ecological and ...

    journal_title:Biometrics

    pub_type: 杂志文章

    doi:10.1111/j.0006-341X.2004.00255.x

    authors: Chen Z,Wang YG

    更新日期:2004-12-01 00:00:00

  • A network-based analysis of the 1861 Hagelloch measles data.

    abstract::In this article, we demonstrate a statistical method for fitting the parameters of a sophisticated network and epidemic model to disease data. The pattern of contacts between hosts is described by a class of dyadic independence exponential-family random graph models (ERGMs), whereas the transmission process that runs ...

    journal_title:Biometrics

    pub_type: 历史文章,杂志文章

    doi:10.1111/j.1541-0420.2012.01748.x

    authors: Groendyke C,Welch D,Hunter DR

    更新日期:2012-09-01 00:00:00

  • Models for circular-linear and circular-circular data constructed from circular distributions based on nonnegative trigonometric sums.

    abstract::Johnson and Wehrly (1978, Journal of the American Statistical Association 73, 602-606) and Wehrly and Johnson (1980, Biometrika 67, 255-256) show one way to construct the joint distribution of a circular and a linear random variable, or the joint distribution of a pair of circular random variables from their marginal ...

    journal_title:Biometrics

    pub_type: 杂志文章

    doi:10.1111/j.1541-0420.2006.00716.x

    authors: Fernández-Durán JJ

    更新日期:2007-06-01 00:00:00

  • Numerical discretization-based estimation methods for ordinary differential equation models via penalized spline smoothing with applications in biomedical research.

    abstract::Differential equations are extensively used for modeling dynamics of physical processes in many scientific fields such as engineering, physics, and biomedical sciences. Parameter estimation of differential equation models is a challenging problem because of high computational cost and high-dimensional parameter space....

    journal_title:Biometrics

    pub_type: 杂志文章

    doi:10.1111/j.1541-0420.2012.01752.x

    authors: Wu H,Xue H,Kumar A

    更新日期:2012-06-01 00:00:00

  • Mixture models for estimating the size of a closed population when capture rates vary among individuals.

    abstract::We develop a parameterization of the beta-binomial mixture that provides sensible inferences about the size of a closed population when probabilities of capture or detection vary among individuals. Three classes of mixture models (beta-binomial, logistic-normal, and latent-class) are fitted to recaptures of snowshoe h...

    journal_title:Biometrics

    pub_type: 杂志文章

    doi:10.1111/1541-0420.00042

    authors: Dorazio RM,Royle JA

    更新日期:2003-06-01 00:00:00

  • A multilevel mixed effects varying coefficient model with multilevel predictors and random effects for modeling hospitalization risk in patients on dialysis.

    abstract::For patients on dialysis, hospitalizations remain a major risk factor for mortality and morbidity. We use data from a large national database, United States Renal Data System, to model time-varying effects of hospitalization risk factors as functions of time since initiation of dialysis. To account for the three-level...

    journal_title:Biometrics

    pub_type: 杂志文章

    doi:10.1111/biom.13205

    authors: Li Y,Nguyen DV,Kürüm E,Rhee CM,Chen Y,Kalantar-Zadeh K,Şentürk D

    更新日期:2020-09-01 00:00:00

  • Bayesian modeling of multiple lesion onset and growth from interval-censored data.

    abstract::In studying rates of occurrence and progression of lesions (or tumors), it is typically not possible to obtain exact onset times for each lesion. Instead, data consist of the number of lesions that reach a detectable size between screening examinations, along with measures of the size/severity of individual lesions at...

    journal_title:Biometrics

    pub_type: 杂志文章

    doi:10.1111/j.0006-341X.2004.00217.x

    authors: Dunson DB,Holloman C,Calder C,Gunn LH

    更新日期:2004-09-01 00:00:00

  • Multilevel functional clustering analysis.

    abstract::In this article, we investigate clustering methods for multilevel functional data, which consist of repeated random functions observed for a large number of units (e.g., genes) at multiple subunits (e.g., bacteria types). To describe the within- and between variability induced by the hierarchical structure in the data...

    journal_title:Biometrics

    pub_type: 杂志文章

    doi:10.1111/j.1541-0420.2011.01714.x

    authors: Serban N,Jiang H

    更新日期:2012-09-01 00:00:00

  • Binary regression analysis with pooled exposure measurements: a regression calibration approach.

    abstract::It has become increasingly common in epidemiological studies to pool specimens across subjects to achieve accurate quantitation of biomarkers and certain environmental chemicals. In this article, we consider the problem of fitting a binary regression model when an important exposure is subject to pooling. We take a re...

    journal_title:Biometrics

    pub_type: 杂志文章

    doi:10.1111/j.1541-0420.2010.01464.x

    authors: Zhang Z,Albert PS

    更新日期:2011-06-01 00:00:00

  • Sensitivity analysis for nonrandom dropout: a local influence approach.

    abstract::Diggle and Kenward (1994, Applied Statistics 43, 49-93) proposed a selection model for continuous longitudinal data subject to nonrandom dropout. It has provoked a large debate about the role for such models. The original enthusiasm was followed by skepticism about the strong but untestable assumptions on which this t...

    journal_title:Biometrics

    pub_type: 杂志文章

    doi:10.1111/j.0006-341x.2001.00007.x

    authors: Verbeke G,Molenberghs G,Thijs H,Lesaffre E,Kenward MG

    更新日期:2001-03-01 00:00:00

  • Composite sampling.

    abstract::In sampling certain types of materials, such as bags of fertilizer, or subsampling large quantities of water, as might be done in investigating the density of plankton in certain environmental situations, it is customary to composite the samples. That is, several samples are drawn, mixed into a composite sample, and a...

    journal_title:Biometrics

    pub_type: 杂志文章

    doi:

    authors: Rohde CA

    更新日期:1976-06-01 00:00:00

  • A mixed model for repeated dilution assays.

    abstract::We propose a generalized linear mixed model to estimate and test marginal effects on titers repeatedly measured by serial dilution assays. The link is log-log and the titer is assumed to follow a gamma distribution. The parameters are estimated by generalized estimating equations. The marginal effects are tested by me...

    journal_title:Biometrics

    pub_type: 杂志文章

    doi:

    authors: Bloch J,Chavance M

    更新日期:1998-06-01 00:00:00

  • Characterizing the relationship between HIV-1 genotype and phenotype: prediction-based classification.

    abstract::This paper establishes a framework for understanding the complex relationships between HIV-1 genotypic markers of resistance to antiretroviral drugs and clinical measures of disease progression. A new classification scheme based on the probabilities of how new patients will respond to antiretroviral therapy given the ...

    journal_title:Biometrics

    pub_type: 杂志文章

    doi:10.1111/j.0006-341x.2002.00145.x

    authors: Foulkes AS,De GV

    更新日期:2002-03-01 00:00:00

  • Sequential equivalence testing and repeated confidence intervals, with applications to normal and binary responses.

    abstract::We propose group sequential tests of the equivalence of two treatments based on ideas related to repeated confidence intervals. These tests adapt readily to unpredictable group sizes, to the possibility of continuing even though a boundary has been crossed, and to nonnormal observations. In comparing two binomial dist...

    journal_title:Biometrics

    pub_type: 杂志文章

    doi:

    authors: Jennison C,Turnbull BW

    更新日期:1993-03-01 00:00:00

  • Bayesian latent multi-state modeling for nonequidistant longitudinal electronic health records.

    abstract::Large amounts of longitudinal health records are now available for dynamic monitoring of the underlying processes governing the observations. However, the health status progression across time is not typically observed directly: records are observed only when a subject interacts with the system, yielding irregular and...

    journal_title:Biometrics

    pub_type: 杂志文章

    doi:10.1111/biom.13261

    authors: Luo Y,Stephens DA,Verma A,Buckeridge DL

    更新日期:2020-03-11 00:00:00

  • UMPU and alternative tests for association in 2 x 2 tables.

    abstract::The use of the uniformly most powerful among the unbiased (UMPU) test was recently suggested for the study of gametic association between two polymorphic loci as an alternative to the Fisher's exact test (Zapata and Alvarez, 1997, Annals of Human Genetics 61, 71-77). However, the proposed test is not UMPU for two-side...

    journal_title:Biometrics

    pub_type: 杂志文章

    doi:10.1111/j.0006-341x.2001.00535.x

    authors: Fuchs C

    更新日期:2001-06-01 00:00:00

  • Bayesian semiparametric models for survival data with a cure fraction.

    abstract::We propose methods for Bayesian inference for a new class of semiparametric survival models with a cure fraction. Specifically, we propose a semiparametric cure rate model with a smoothing parameter that controls the degree of parametricity in the right tail of the survival distribution. We show that such a parameter ...

    journal_title:Biometrics

    pub_type: 杂志文章

    doi:10.1111/j.0006-341x.2001.00383.x

    authors: Ibrahim JG,Chen MH,Sinha D

    更新日期:2001-06-01 00:00:00

  • Estimating the size of closed populations using inverse multiple-recapture sampling.

    abstract::A log-linear model for estimating the size of a closed population is defined for inverse multiple-recapture sampling with dependent samples. Efficient estimators of the log-linear model parameters and the population size are obtained by the method of minimum chi-square. A chi-square test of the general linear hypothes...

    journal_title:Biometrics

    pub_type: 杂志文章

    doi:

    authors: Bonett DG,Woodward JA,Bentler PM

    更新日期:1987-12-01 00:00:00

  • A generalized estimating equations approach for spatially correlated binary data: applications to the analysis of neuroimaging data.

    abstract::This paper proposes a generalized estimating equations approach for the analysis of spatially correlated binary data when there are large numbers of spatially correlated observations on a moderate number of subjects. This approach is useful when the scientific focus is on modeling the marginal mean structure. Proper m...

    journal_title:Biometrics

    pub_type: 杂志文章

    doi:

    authors: Albert PS,McShane LM

    更新日期:1995-06-01 00:00:00

  • Large scale maximum average power multiple inference on time-course count data with application to RNA-seq analysis.

    abstract::Experiments that longitudinally collect RNA sequencing (RNA-seq) data can provide transformative insights in biology research by revealing the dynamic patterns of genes. Such experiments create a great demand for new analytic approaches to identify differentially expressed (DE) genes based on large-scale time-course c...

    journal_title:Biometrics

    pub_type: 杂志文章

    doi:10.1111/biom.13144

    authors: Cao M,Zhou W,Breidt FJ,Peers G

    更新日期:2020-03-01 00:00:00

  • Dynamic comparison of Kaplan-Meier proportions: monitoring a randomized clinical trial with a long-term binary endpoint.

    abstract::The approach to early termination for efficacy in a trial where events occur over time but the primary question of interest relates to a long-term binary endpoint is not straightforward. This article considers comparison of treatment groups with Kaplan-Meier (KM) proportions evaluated at increasing times from randomiz...

    journal_title:Biometrics

    pub_type: 杂志文章

    doi:10.1111/j.1541-0420.2007.00874.x

    authors: Brittain E,Follmann D,Yang S

    更新日期:2008-03-01 00:00:00

  • Estimation of completeness and adjustment of age-specific and age-standardized incidence rates.

    abstract::This note discusses the use of capture-mark-recapture methods and log-linear, linear, product models for incomplete tables (Espeland, 1986, Communications in Statistics--Simulation and Computing 15, 405-424) to estimate completeness of reporting in a disease registry and to estimate incompleteness-adjusted incidence r...

    journal_title:Biometrics

    pub_type: 杂志文章

    doi:

    authors: Hilsenbeck SG,Kurucz C,Duncan RC

    更新日期:1992-12-01 00:00:00

  • Statistical significance for hierarchical clustering.

    abstract::Cluster analysis has proved to be an invaluable tool for the exploratory and unsupervised analysis of high-dimensional datasets. Among methods for clustering, hierarchical approaches have enjoyed substantial popularity in genomics and other fields for their ability to simultaneously uncover multiple layers of clusteri...

    journal_title:Biometrics

    pub_type: 杂志文章

    doi:10.1111/biom.12647

    authors: Kimes PK,Liu Y,Neil Hayes D,Marron JS

    更新日期:2017-09-01 00:00:00

  • A comment on optimal allocations for bioequivalence studies.

    abstract::A method purporting to provide optimal allocations in bioequivalence studies fails to do so on both statistical and practical grounds. Reasons as to why this is so are given. ...

    journal_title:Biometrics

    pub_type: 评论,杂志文章

    doi:10.1111/j.0006-341x.1999.01314.x

    authors: Senn S,Grieve AP

    更新日期:1999-12-01 00:00:00

  • Biased and unbiased estimation in longitudinal studies with informative visit processes.

    abstract::The availability of data in longitudinal studies is often driven by features of the characteristics being studied. For example, clinical databases are increasingly being used for research to address longitudinal questions. Because visit times in such data are often driven by patient characteristics that may be related...

    journal_title:Biometrics

    pub_type: 杂志文章

    doi:10.1111/biom.12501

    authors: McCulloch CE,Neuhaus JM,Olin RL

    更新日期:2016-12-01 00:00:00

  • Randomization inference with general interference and censoring.

    abstract::Interference occurs between individuals when the treatment (or exposure) of one individual affects the outcome of another individual. Previous work on causal inference methods in the presence of interference has focused on the setting where it is a priori assumed that there is "partial interference," in the sense that...

    journal_title:Biometrics

    pub_type: 杂志文章

    doi:10.1111/biom.13125

    authors: Loh WW,Hudgens MG,Clemens JD,Ali M,Emch ME

    更新日期:2020-03-01 00:00:00

  • On confidence intervals for the hazard ratio in randomized clinical trials.

    abstract::The log-rank test is widely used to compare two survival distributions in a randomized clinical trial, while partial likelihood (Cox, 1975) is the method of choice for making inference about the hazard ratio under the Cox (1972) proportional hazards model. The Wald 95% confidence interval of the hazard ratio may inclu...

    journal_title:Biometrics

    pub_type: 杂志文章

    doi:10.1111/biom.12528

    authors: Lin DY,Dai L,Cheng G,Sailer MO

    更新日期:2016-12-01 00:00:00

  • A two-stage stepwise estimation procedure.

    abstract::This article proposes a two-stage simultaneous confidence procedure for the comparisons of k pairs of population means, without using multiplicity adjustment of more than two populations. The proposed procedure can be broadly applied to parametric or nonparametric models. It is robust and versatile because its derivat...

    journal_title:Biometrics

    pub_type: 杂志文章

    doi:10.1111/j.1541-0420.2007.00902.x

    authors: Chen JT

    更新日期:2008-06-01 00:00:00