Rapid detection and differentiation of bovine herpesvirus 1 and 5 glycoprotein C gene in clinical specimens by multiplex-PCR.

Abstract:

:A multiplex polymerase chain reaction (multiplex-PCR) to detect and differentiate bovine herpesvirus 1 (BoHV-1) and 5 (BoHV-5) was developed using primers for the gene sequence that encodes the glycoprotein C. The technique was assessed against the BoHV-1 and BoHV-5 cell culture adapted strains, and clinical samples collected from animals with clinical signs of BoHV-1 (n = 10) or BoHV-5 (n = 7) infection and with diagnosis confirmed by virus isolation in cell culture and semi-nested PCR. Fifteen clinical samples from asymptomatic animals were included as control group. For the evaluation of the amplifiability of the extracted nucleic acid from clinical specimens was included a bovine internal control that amplified a 626 bp fragment of the ND5 gene present in the bovine mitochondrial DNA. For DNA extraction, a combination of the phenol/chloroform/isoamyl alcohol and silica/guanidine isothiocyanate methods was used. The specificity of the BoHV-1 and BoHV-5 amplicons from standard strains were confirmed by sequence analysis. All the positive clinical samples for BoHV included in this study were characterized as BoHV-1 or BoHV-5 by the difference in length of the amplified product visualized in a agarose gel (354 bp size for BoHV-1, and 159 bp for BoHV-5). The internal control was amplified in all clinical specimens. Non-specific reactions were not observed when the multiplex-PCR was assessed with other viruses (bovine viral diarrhea virus and rabies virus) and BoHV-negative clinical samples from fetuses and adult cattle obtained from a slaughterhouse.

journal_name

J Virol Methods

authors

Claus MP,Alfieri AF,Folgueras-Flatschart AV,Wosiacki SR,Médici KC,Alfieri AA

doi

10.1016/j.jviromet.2005.05.001

subject

Has Abstract

pub_date

2005-09-01 00:00:00

pages

183-8

issue

1-2

eissn

0166-0934

issn

1879-0984

pii

S0166-0934(05)00146-1

journal_volume

128

pub_type

杂志文章
  • Addition of exogenous polypeptides on the mammalian reovirus outer capsid using reverse genetics.

    abstract::Addition of exogenous peptide sequences on viral capsids is a powerful approach to study the process of viral infection or to retarget viruses toward defined cell types. Until recently, it was not possible to manipulate the genome of mammalian reovirus and this was an obstacle to the addition of exogenous sequence tag...

    journal_title:Journal of virological methods

    pub_type: 杂志文章

    doi:10.1016/j.jviromet.2011.11.021

    authors: Brochu-Lafontaine V,Lemay G

    更新日期:2012-02-01 00:00:00

  • Evaluation of a semi-automatic radioimmunoassay for hepatitis B surface antigen (HBsAg).

    abstract::The recently developed semi-automatic Hepatube system was evaluated in comparison to another radioimmunoassay for the detection of hepatitis B surface antigen (HBsAg), the manual Ausria II-125 test. After incubation of serum in anti-HBs coated tubes, the Hepatube system uses a machine to wash the tubes and to add trac...

    journal_title:Journal of virological methods

    pub_type: 杂志文章

    doi:10.1016/0166-0934(83)90074-5

    authors: de Vries J,Kruining J,Heijtink RA

    更新日期:1983-02-01 00:00:00

  • Development and validation of a foot-and-mouth disease virus SAT serotype-specific 3ABC assay to differentiate infected from vaccinated animals.

    abstract::The effective control of foot-and-mouth disease (FMD) requires sensitive, specific and rapid diagnostic tools. However, the control and eradication of FMD in Africa is complicated by, among other factors, the existence of five of the seven FMD virus (FMDV) serotypes, including the SAT-serotypes 1, 2 and 3 that are gen...

    journal_title:Journal of virological methods

    pub_type: 杂志文章

    doi:10.1016/j.jviromet.2018.02.006

    authors: Chitray M,Grazioli S,Willems T,Tshabalala T,De Vleeschauwer A,Esterhuysen JJ,Brocchi E,De Clercq K,Maree FF

    更新日期:2018-05-01 00:00:00

  • Characterisation of isolates and strains of citrus tristeza closterovirus using restriction analysis of the coat protein gene amplified by the polymerase chain reaction.

    abstract::Citrus Tristeza Virus (CTV) exists as a large number of distinct strains differing in biological properties and with different distributions in citrus producing countries. Strategies such as eradication or cross protection, aimed at controlling severe variants of the pathogen, require procedures to identify virus stra...

    journal_title:Journal of virological methods

    pub_type: 杂志文章

    doi:10.1016/0166-0934(93)90065-y

    authors: Gillings M,Broadbent P,Indsto J,Lee R

    更新日期:1993-10-01 00:00:00

  • Duplex Real Time PCR for the detection of hepatitis A virus in shellfish using Feline Calicivirus as a process control.

    abstract::The consumption of bivalve shellfish is a common cause of foodborne outbreaks of viral origin. The evaluation of the sanitary quality of these products, however, is still based on bacterial indicators of fecal contamination (Reg. (EC) No. 2073/2005 and No.1441/2007) even if it is known that they are not reliable indic...

    journal_title:Journal of virological methods

    pub_type: 杂志文章

    doi:10.1016/j.jviromet.2009.09.003

    authors: Di Pasquale S,Paniconi M,De Medici D,Suffredini E,Croci L

    更新日期:2010-01-01 00:00:00

  • The development of a real-time reverse transcription-polymerase chain reaction (rRT-PCR) assay using TaqMan technology for the pan detection of bluetongue virus (BTV).

    abstract::Bluetongue virus (BTV) is an infectious, non-contagious viral disease of domestic and wild ruminants that is transmitted by adult females of certain Culicoides species. Since 2006, several serotypes including BTV-1, 2, 4, 6, 8, 9 and 16, have spread from the Mediterranean basin into Northern Europe for the first time....

    journal_title:Journal of virological methods

    pub_type: 杂志文章

    doi:10.1016/j.jviromet.2017.03.009

    authors: Mulholland C,McMenamy MJ,Hoffmann B,Earley B,Markey B,Cassidy J,Allan G,Welsh MD,McKillen J

    更新日期:2017-07-01 00:00:00

  • Evaluating SARS-CoV-2 spike and nucleocapsid proteins as targets for antibody detection in severe and mild COVID-19 cases using a Luminex bead-based assay.

    abstract::Large-scale serosurveillance of severe acute respiratory syndrome coronavirus type 2 (SARS-CoV-2) will only be possible if serological tests are sufficiently reliable, rapid and affordable. Many assays are either labour-intensive and require specialised facilities (e.g. virus neutralization assays), or are expensive w...

    journal_title:Journal of virological methods

    pub_type: 杂志文章

    doi:10.1016/j.jviromet.2020.114025

    authors: Mariën J,Ceulemans A,Michiels J,Heyndrickx L,Kerkhof K,Foque N,Widdowson MA,Mortgat L,Duysburgh E,Desombere I,Jansens H,Van Esbroeck M,Ariën KK

    更新日期:2021-02-01 00:00:00

  • An inhibition enzyme-linked immunosorbent assay for the detection of antibody to Rift Valley fever virus in humans, domestic and wild ruminants.

    abstract::This paper describes the development and validation of an inhibition ELISA based on gamma-irradiated tissue culture-derived antigen for the detection of antibody to Rift Valley fever virus (RVFV) in humans, domestic and wild ruminants. Validation data sets derived from field-collected sera in Africa (humans=1367, catt...

    journal_title:Journal of virological methods

    pub_type: 杂志文章

    doi:10.1016/j.jviromet.2005.02.008

    authors: Paweska JT,Mortimer E,Leman PA,Swanepoel R

    更新日期:2005-07-01 00:00:00

  • Development of RT-qPCR assays for the detection of three latent viruses of pome.

    abstract::Latent fruit tree viruses present economic threat to the industry and nurseries as diseases they cause not only reduce fruit quality and production yield, but can also be spread inadvertently through propagation due to the lack of viral symptoms on an infected mother plant. As a result, these viruses require appropria...

    journal_title:Journal of virological methods

    pub_type: 杂志文章

    doi:10.1016/j.jviromet.2020.113836

    authors: Beaver-Kanuya E,Harper SJ

    更新日期:2020-04-01 00:00:00

  • Comparison of two commercial kits and an in-house ELISA for the detection of equine rotavirus in foal feces.

    abstract::Group A rotaviruses (RVA) are important infectious agents associated with diarrhea in the young of several animal species including foals. Currently, a variety of diagnosis methods are commercially available, like ELISA, latex agglutination and immunochromatographic assays. These commercial tests are mainly designed f...

    journal_title:Journal of virological methods

    pub_type: 杂志文章

    doi:10.1016/j.jviromet.2015.05.002

    authors: Miño S,Kern A,Barrandeguy M,Parreño V

    更新日期:2015-09-15 00:00:00

  • Receptor-mediated transport of oligodeoxynucleotides into hepatic cells.

    abstract::Receptor-mediated endocytosis was employed for a highly efficient transport of oligodeoxynucleotides into hepatoma cell line PLC/PRF/5. The oligodeoxynucleotides were bound to the asialofetuin-poly-L-lysine conjugate and this complex was internalized by the cells via asialoglycoprotein receptor, an endocytic receptor ...

    journal_title:Journal of virological methods

    pub_type: 杂志文章

    doi:10.1016/0166-0934(93)90181-p

    authors: Reinis M,Damková M,Korec E

    更新日期:1993-04-01 00:00:00

  • Evaluation of three different filters and two methods for recovering viruses from drinking water.

    abstract::Among the enteric viruses implicated in waterborne outbreaks, human norovirus and hepatitis A virus (HAV) are a serious public health issue. Most foodborne viruses are difficult or currently unlikely to cultivate. Because of the lack of a cell culture method, real-time reverse transcriptase PCR is commonly used for th...

    journal_title:Journal of virological methods

    pub_type: 杂志文章

    doi:10.1016/j.jviromet.2020.113939

    authors: Hennechart-Collette C,Dehan O,Fraisse A,Martin-Latil S,Perelle S

    更新日期:2020-10-01 00:00:00

  • Generic detection and differentiation of tobamoviruses by a spot nested RT-PCR-RFLP using dI-containing primers along with homologous dG-containing primers.

    abstract::A spot nested RT-PCR-RFLP method to detect and identify all members of the Tobamovirus genus is described. It involves a one-step RT-PCR, in which the combination of degenerate deoxyinosine (dI)-substituted primers amplified part of the polymerase region of tobamoviruses, followed by a nested PCR amplification that in...

    journal_title:Journal of virological methods

    pub_type: 杂志文章

    doi:10.1016/j.jviromet.2004.01.004

    authors: Dovas CI,Efthimiou K,Katis NI

    更新日期:2004-05-01 00:00:00

  • Predicting herd protection against foot-and-mouth disease by testing individual and bulk tank milk samples.

    abstract::Four groups of cattle were tested for antibodies against foot-and-mouth disease (FMD) virus type O(1) over three 70 day vaccination cycles using the liquid-phase-blocking-ELISA (LPBE). First lactation cows showed the lowest titres and group protection levels (GPLs) against FMD virus strains with 'r' values < or =0.5 w...

    journal_title:Journal of virological methods

    pub_type: 杂志文章

    doi:10.1016/s0166-0934(01)00342-1

    authors: Armstrong RM,Mathew ES

    更新日期:2001-09-01 00:00:00

  • Rapid detection of human parvovirus B19 DNA by dot-hybridization and the polymerase chain reaction.

    abstract::The results of a comparison of three DNA-detection methods for human parvovirus B19 DNA are described. The sensitivity of detection of virus from hybridization assays using 32P-radiolabeled DNA and RNA probes was compared with a method for enzymatically amplifying specific target DNA sequences (polymerase chain reacti...

    journal_title:Journal of virological methods

    pub_type: 杂志文章

    doi:10.1016/0166-0934(89)90085-2

    authors: Salimans MM,Holsappel S,van de Rijke FM,Jiwa NM,Raap AK,Weiland HT

    更新日期:1989-01-01 00:00:00

  • Demonstration of calicivirus in human faeces by immunosorbent and immunogold-labelling electron microscopy methods.

    abstract::Immunosorbent electron microscopy (ISEM) and immuno-gold staining (IGS) electron microscopy methods have been applied to human faeces, shown by direct electron microscopy (EM) to contain calicivirus. Caliciviruses were successfully trapped on grids coated with positive rabbit or human antisera against calicivirus, but...

    journal_title:Journal of virological methods

    pub_type: 杂志文章

    doi:10.1016/0166-0934(86)90034-0

    authors: Kjeldsberg E

    更新日期:1986-11-01 00:00:00

  • Quantitative detection of HIV-1 RNA using NucliSens EasyQ HIV-1 assay.

    abstract::HIV-1 RNA viral load has become the major biological marker for disease prognosis and outcome of antiretroviral therapy in the treatment of HIV-infected individuals. The aim of this study was to compare the performance of the new CE marked NucliSens EasyQ HIV-1 assay with NucliSens HIV-1 QT assay (reference method). N...

    journal_title:Journal of virological methods

    pub_type: 杂志文章

    doi:10.1016/j.jviromet.2005.04.017

    authors: Yao J,Liu Z,Ko LS,Pan G,Jiang Y

    更新日期:2005-10-01 00:00:00

  • A generic real-time TaqMan assay for specific detection of lapinized Chinese vaccines against classical swine fever.

    abstract::Classical swine fever (CSF) is a highly contagious disease, causing severe economic losses in the pig industry worldwide. Vaccination of pigs with lapinized Chinese vaccines is still practised in some regions of the world, where the virus is enzootic, in order to prevent and control the disease. However, a single real...

    journal_title:Journal of virological methods

    pub_type: 杂志文章

    doi:10.1016/j.jviromet.2011.05.003

    authors: Liu L,Xia H,Everett H,Sosan O,Crooke H,Meindl-Böhmer A,Qiu HJ,Moennig V,Belák S,Widén F

    更新日期:2011-08-01 00:00:00

  • Development and application of a universal Taqman real-time PCR for quantitation of duck hepatitis B virus DNA.

    abstract::To develop a quantitative assay for universal detection of duck hepatitis B virus (DHBV) DNA, a Taqman real-time fluorescent quantitative polymerase chain reaction (FQ-PCR) assay was developed using primers and probes based on genomic sequences located at nucleotide 241-414 of the DHBV Core region which possesses the ...

    journal_title:Journal of virological methods

    pub_type: 杂志文章

    doi:10.1016/j.jviromet.2013.03.025

    authors: Wang Y,Li Y,Yang C,Hui L,Han Q,Ma L,Wang Q,Yang G,Liu Z

    更新日期:2013-07-01 00:00:00

  • Solid phase reverse passive hemadsorption test for hepatitis B surface antigen.

    abstract::A solid phase reverse passive hemadsorption test (SP-RPHAd) for hepatitis B surface antigen detection is described. It was compared with a commercial reverse passive hemagglutination assay (Hepatest, Wellcome, U.K.). SP-RPHAd is four-fold less expensive than Hepatest and undiluted sera can be used instead of eight-fol...

    journal_title:Journal of virological methods

    pub_type: 杂志文章

    doi:10.1016/0166-0934(87)90115-7

    authors: Duverlie G,Driencourt M,Roussel C,Daniel P

    更新日期:1987-11-01 00:00:00

  • OLIGSCAN: a computer program to assist in the design of PCR primers homologous to multiple DNA sequences.

    abstract::OLIGSCAN (oligonucleotide scanner) is a computer program for IBM-PC-compatible computers that allows the user to scan up to 200 DNA sequences for homology to oligonucleotide sequences of interest. Once a core sequence of longer than the user-defined minimum length is found, the remainder of the oligonucleotide is comp...

    journal_title:Journal of virological methods

    pub_type: 杂志文章

    doi:10.1016/0166-0934(92)90143-2

    authors: Montpetit ML,Cassol S,Salas T,O'Shaughnessy MV

    更新日期:1992-02-01 00:00:00

  • A rapid RT-LAMP assay for the detection of all four lineages of Peste des Petits Ruminants Virus.

    abstract::Peste des petits ruminants (PPR) is a viral disease of small ruminants that is caused by the PPR virus (PPRV) and is a significant burden on subsistence farmers across the developing world. Loop-mediated isothermal amplification (LAMP) provides cost-effective, rapid, specific and sensitive detection of nucleic acid an...

    journal_title:Journal of virological methods

    pub_type: 杂志文章

    doi:10.1016/j.jviromet.2019.113730

    authors: Rajko-Nenow P,Flannery J,Arnold H,Howson ELA,Darpel K,Stedman A,Corla A,Batten C

    更新日期:2019-12-01 00:00:00

  • Predicting whole genome sequencing success for archived avian influenza virus (Orthomyxoviridae) samples using real-time and droplet PCRs.

    abstract::Long-term viral archives are valuable sources of research data. Each archive can store hundreds of thousands of diverse sample types. In the current era of whole genome sequencing, archived samples become a rich source of evolutionary and epidemiological data that can span years, and even decades. However, the ability...

    journal_title:Journal of virological methods

    pub_type: 杂志文章

    doi:10.1016/j.jviromet.2019.113777

    authors: Hopken MW,Piaggio AJ,Pabilonia KL,Pierce J,Anderson T,Abdo Z

    更新日期:2020-02-01 00:00:00

  • Low copy target detection by Droplet Digital PCR through application of a novel open access bioinformatic pipeline, 'definetherain'.

    abstract::Droplet Digital PCR (ddPCR) represents a new and alternative platform to conventional quantitative-PCR (qPCR) for the quantitation of DNA templates. However, the proposed improvement in sensitivity and reproducibility offered by ddPCR is not yet fully proven, partly because the delineation between positive and negativ...

    journal_title:Journal of virological methods

    pub_type: 杂志文章

    doi:10.1016/j.jviromet.2014.02.020

    authors: Jones M,Williams J,Gärtner K,Phillips R,Hurst J,Frater J

    更新日期:2014-06-01 00:00:00

  • Quantification of a legume begomovirus to evaluate soybean genotypes for resistance to yellow mosaic disease.

    abstract::Mungbean yellow mosaic India virus (MYMIV) infecting soybean and other legumes causes yellow mosaic disease (YMD). Evaluation of soybean genotypes for YMD resistance involves field screening at disease hot spots or in a protected environment using infectious clones or viruliferous whiteflies as sources of virus inocul...

    journal_title:Journal of virological methods

    pub_type: 杂志文章

    doi:10.1016/j.jviromet.2019.03.002

    authors: Ramesh SV,Shivakumar M,Ramteke R,Bhatia VS,Chouhan BS,Goyal S,Singh A,Praveen S,Gill BS,Chand S

    更新日期:2019-06-01 00:00:00

  • A method for detecting human enteroviruses in aquatic sediments.

    abstract::A method is described for detecting enteroviruses in both freshwater and marine sediments. Viruses were recovered from sediments by elution into 6% beef extract at pH 9.0 and concentration with polyethylene glycol 6000. The recovery efficiency ranged from 6 to 55% for marine sediments and 16 to 77% for freshwater sedi...

    journal_title:Journal of virological methods

    pub_type: 杂志文章

    doi:10.1016/0166-0934(85)90101-6

    authors: Lewis GD,Loutit MW,Austin FJ

    更新日期:1985-02-01 00:00:00

  • An international collaborative study to assess a set of reference reagents for HIV-1 PCR.

    abstract::An international collaborative study was performed to evaluate a set of PCR reference reagents for HIV diagnosis. Twenty-six laboratories from 9 countries analysed a proficiency panel of 10 coded DNA samples using the PCR reference reagents and protocols. For comparison, these coded samples were then assessed using a ...

    journal_title:Journal of virological methods

    pub_type: 杂志文章

    doi:10.1016/0166-0934(92)90018-9

    authors: Bootman JS,Kitchin PA

    更新日期:1992-04-01 00:00:00

  • A rapid and sensitive micro scale assay for quantitative detection of cell protective effects: application for the isolation of a monoclonal antibody against HeLa cell proteins involved in poliovirus attachment.

    abstract::A combined assay consisting of a pre-cpe-protection assay and a double-antibody sandwich ELISA for detecting poliovirus was developed on a microtiter scale in order to quantify inhibition of virus replication caused by cell protective antibodies. The system was of high sensitivity and allowed the measurement of the pr...

    journal_title:Journal of virological methods

    pub_type: 杂志文章

    doi:10.1016/0166-0934(91)90080-j

    authors: Barnert RH,Zeichhardt H,Habermehl KO

    更新日期:1991-11-01 00:00:00

  • Applicability of integrated cell culture reverse transcriptase quantitative PCR (ICC-RTqPCR) for the simultaneous detection of the four human enteric enterovirus species in disinfection studies.

    abstract::A newly developed integrated cell culture reverse transcriptase quantitative PCR (ICC-RTqPCR) method and its applicability in UV disinfection studies is described. This method utilizes a cell culture system coupled with four RTqPCR assays to detect four species of human enterovirus (e.g., Enterovirus A, Enterovirus B,...

    journal_title:Journal of virological methods

    pub_type: 杂志文章

    doi:10.1016/j.jviromet.2018.05.008

    authors: Ryu H,Schrantz KA,Brinkman NE,Boczek LA

    更新日期:2018-08-01 00:00:00

  • Novel and highly sensitive SYBR® Green real-time pcr for poxvirus detection in odontocete cetaceans.

    abstract::Poxviruses are emerging pathogens in cetaceans, temporarily named 'Cetaceanpoxvirus' (CePV, family Poxviridae), classified into two main lineages: CePV-1 in odontocetes and CePV-2 in mysticetes. Only a few studies performed the molecular detection of CePVs, based on DNA-polymerase gene and/or DNA-topoisomerase I gene ...

    journal_title:Journal of virological methods

    pub_type: 杂志文章

    doi:10.1016/j.jviromet.2018.06.002

    authors: Sacristán C,Catão-Dias JL,Ewbank AC,Ferreira-Machado E,Neves E,Santos-Neto EB,Azevedo A,Laison-Brito J Jr,De Castilho PV,Daura-Jorge FG,Simões-Lopes PC,Carballo M,García-Párraga D,Sánchez-Vizcaíno JM,Esperón F

    更新日期:2018-09-01 00:00:00