miR-143 expression profiles in urinary bladder cancer: correlation with clinical and epidemiological parameters.

Abstract:

:Hsa-mir-143 and hsa-let-7c have been reported to be deregulated in multiple neoplasms. The main purpose of this study was to investigate the expression of these miRNAs in bladder cancer (BCa) and to analyze the association between their expression profiles and clinical and epidemiological parameters. Ninety BCa specimens were included. Expression patterns of miR-143 and let-7c were assessed by qRT-PCR using Taqman specific probes. Validated and predicted targets of these miRNA's were identified using CSmiRTar and DAVID tools, respectively. miR-143 was downregulated in tumors compared to controls (mean fold-change (FC) = 0.076). Its expression was significantly higher in MIBC compared to NMIBC (p = 0,001). Its value as a potential biomarker discriminating non invasive tumors from the invasive ones was confirmed by ROC curve (AUC = 0.768; p = 0.0001). Also, this down-regulation positively correlates with frequency of tobacco use (p = 0,04) and chronic alcohol consumption (p = 0,04). Let-7c was overexpressed in BCa samples (mean (FC = 9.92) compared to non tumoral ones but was not associated to clinical and epidemiological parameters. A comprehensive overview of miR-143 targets and pathways implicated in BCa initiation, diagnosis or prognosis using bioinformatical analysis, was conducted. While both deregulated miRNAs may contribute to urothelial tumorigenesis, the deregulation of miR-143 was significantly correlated to epidemiological and clinical parameters.

journal_name

Mol Biol Rep

authors

Boubaker NS,Spagnuolo M,Trabelsi N,Said R,Gurtner A,Regazzo G,Ayed H,Blel A,Karray O,Saadi A,Rammeh S,Chebil M,Rizzo MG,Piaggio G,Ouerhani S

doi

10.1007/s11033-019-05228-1

subject

Has Abstract

pub_date

2020-02-01 00:00:00

pages

1283-1292

issue

2

eissn

0301-4851

issn

1573-4978

pii

10.1007/s11033-019-05228-1

journal_volume

47

pub_type

杂志文章
  • A novel missense (A79V) mutation of goat PROP1 gene and its association with production traits.

    abstract::As a paired class homeodomain transcription factor, mutations of PROP1 (Prophet of POU1F1) are responsible for deficiencies of GH, PRL, TSH, LH and FSH. Regarding mutations of GH, PRL, and POU1F1 genes significantly associating with different production traits, PROP1 gene is a novel important candidate gene for detect...

    journal_title:Molecular biology reports

    pub_type: 杂志文章

    doi:10.1007/s11033-008-9418-x

    authors: Lan X,Pan C,Zhang L,Zhao M,Zhang C,Lei C,Chen H

    更新日期:2009-11-01 00:00:00

  • PI3K/AKT/mTOR pathway and autophagy regulator genes in paranasal squamous cell carcinoma metastasis.

    abstract::Although there are many studies on the role of PI3K/AKT/mTOR pathway and autophagy genes in the mechanism of head and neck cancer formation and prognostic significance, there is no study investigating the role of the genes in paranasal sinus carcinomas. The aim of the study was to assess the role of the PI3K/AKT/mTOR ...

    journal_title:Molecular biology reports

    pub_type: 杂志文章

    doi:10.1007/s11033-020-05458-8

    authors: Biray Avci C,Sezgin B,Goker Bagca B,Karci HB,Gode S

    更新日期:2020-05-01 00:00:00

  • Production of antibacterial peptide from bee venom via a new strategy for heterologous expression.

    abstract::Honey bee is important economic insect that not only pollinates fruits and crops but also provides products with various physiological activities. Bee venom is a functional agent that is widely applied in clinical treatment and pharmacy. Secapin is one of these agents that have a significant role in therapy. The funct...

    journal_title:Molecular biology reports

    pub_type: 杂志文章

    doi:10.1007/s11033-014-3706-4

    authors: Hou C,Guo L,Lin J,You L,Wu W

    更新日期:2014-12-01 00:00:00

  • CD40 signal expression in gastric cancer tissue and its correlation with prognosis of gastric cancer patients.

    abstract::CD40 signaling plays a critical role in the survival rate of gastric cancer patients. Tumour samples were collected from 73 patients with who were diagnosed as gastric cancer in general surgery department in the 1st affiliated hospital of Suzhou University between September 2002 and July 2003. All patients had not rec...

    journal_title:Molecular biology reports

    pub_type: 杂志文章

    doi:10.1007/s11033-012-1734-5

    authors: Li R,Chen WC,Pang XQ,Tian WY,Wang WP,Zhang XG

    更新日期:2012-09-01 00:00:00

  • Cloning, identification and expression analysis of ACC oxidase gene involved in ethylene production pathway.

    abstract::1-aminocyclopropane-1-carboxylic acid oxidase (ACO) enzyme is a member of the Fe II-dependent family of oxidases/oxygenases which require Fe(2+) as a cofactor, ascorbate as a cosubstrate and CO(2) as an activator. This enzyme catalyses the terminal step in the plant signaling of ethylene biosynthetic pathway. A 948 bp...

    journal_title:Molecular biology reports

    pub_type: 杂志文章

    doi:10.1007/s11033-012-2178-7

    authors: Jafari Z,Haddad R,Hosseini R,Garoosi G

    更新日期:2013-02-01 00:00:00

  • Evaluation of TRPM (transient receptor potential melastatin) genes expressions in myocardial ischemia and reperfusion.

    abstract::In the present study, the expression levels of TRPM1, TRPM2, TRPM3, TRPM4, TRPM5, TRPM6, TRPM7, and TRPM8 genes were evaluated in heart tissues after ischemia/reperfusion (IR). For this study, 30 albino male Wistar rats were equally divided into three groups as follows: Group 1: control group (n:10), Group II: ischemi...

    journal_title:Molecular biology reports

    pub_type: 杂志文章

    doi:10.1007/s11033-014-3139-0

    authors: Demir T,Yumrutas O,Cengiz B,Demiryurek S,Unverdi H,Kaplan DS,Bayraktar R,Ozkul N,Bagcı C

    更新日期:2014-05-01 00:00:00

  • Localization of small RNAs hybridizable to a B2 clone in the nuclear fraction of mouse cell lines.

    abstract::An RNA polymerase III transcript, 7SK nuclear RNA, was found to bear sequence homology to the B2 class of highly repeated elements in the mouse genome. Northern blot hybridizations between the small RNAs and two B2 clones showed that only one of them (p49C8) hybridized to 7SK RNA. Both clones, however, hybridized to 4...

    journal_title:Molecular biology reports

    pub_type: 杂志文章

    doi:10.1007/BF00580650

    authors: Gallant J,Lovely J,Krause M

    更新日期:1987-01-01 00:00:00

  • Serum levels of adiponectin and vitamin D correlate with activity of Rheumatoid Arthritis.

    abstract::Rheumatoid arthritis (RA) is a chronic inflammatory disease in which numerous cells and mediators affect inflammatory conditions and disease severity. To compare the serum levels of adiponectin, vitamin D, copper, and zinc in patients with RA and to investigate the relationship between these parameters and RA severity...

    journal_title:Molecular biology reports

    pub_type: 杂志文章

    doi:10.1007/s11033-019-04682-1

    authors: Khajoei S,Hassaninevisi M,Kianmehr N,Seif F,Khoshmirsafa M,Shekarabi M,Samei A,Haghighi A

    更新日期:2019-04-01 00:00:00

  • Detection of new biallelic polymorphisms in the human MxA gene.

    abstract::The interferon-inducible human MxA protein plays an important role in innate defense against an array of viruses. One might expect allelic diversity at the MxA locus to influence the timing and magnitude of its expression or even the range of viruses whose biological cycle is inhibited by the encoded product. Here we ...

    journal_title:Molecular biology reports

    pub_type: 杂志文章

    doi:10.1007/s11033-012-1708-7

    authors: Duc TT,Farnir F,Michaux C,Desmecht D,Cornet A

    更新日期:2012-08-01 00:00:00

  • CXCL12 and TP53 genetic polymorphisms as markers of susceptibility in a Brazilian children population with acute lymphoblastic leukemia (ALL).

    abstract::Acute lymphoblastic leukemia (ALL) is the most common pediatric malignancy. Genetic polymorphisms in the 3'UTR region of the CXCL12 (rs1801157) and TP53 codon 72 (rs1042522) genes may contribute to susceptibility to childhood ALL because they affect some important processes, such as metastasis regulation and tumor sup...

    journal_title:Molecular biology reports

    pub_type: 杂志文章

    doi:10.1007/s11033-013-2551-1

    authors: de Lourdes Perim A,Guembarovski RL,Oda JM,Lopes LF,Ariza CB,Amarante MK,Fungaro MH,de Oliveira KB,Watanabe MA

    更新日期:2013-07-01 00:00:00

  • Genome-wide analysis of BURP domain-containing genes in maize and sorghum.

    abstract::BURP domain-containing genes comprise a large plant-specific family, yet the functions are very poorly understood, especially in maize (Zea mays) and sorghum (Sorghum vulgare). In this study, 26 BURP family genes in maize (ZmBURP01-15) and sorghum (SbBURP01-11) were identified including the gene structure, phylogeneti...

    journal_title:Molecular biology reports

    pub_type: 杂志文章

    doi:10.1007/s11033-010-0587-z

    authors: Gan D,Jiang H,Zhang J,Zhao Y,Zhu S,Cheng B

    更新日期:2011-10-01 00:00:00

  • Biochemical characterization of two Azotobacter vinelandii FKBPs and analysis of their interaction with the small subunit of carbamoyl phosphate synthetase.

    abstract::FK-506 binding proteins (FKBPs) belong to the peptidyl-prolyl cis/trans isomerase superfamily (PPIases, EC: 5.2.1.8) which catalyzes the interconversion of peptidyl-prolyl bonds while they can also act on polypeptides, as folding helper enzymes. Here, we biochemically characterize two recombinant FKBPs, AvfkbA1 and Av...

    journal_title:Molecular biology reports

    pub_type: 杂志文章

    doi:10.1007/s11033-012-1869-4

    authors: Dimou M,Zografou C,Venieraki A,Katinakis P

    更新日期:2012-12-01 00:00:00

  • Molecular insight into the metabolic activities of a protein-rich micro alga, Arthrospira platensis by de novo transcriptome analysis.

    abstract::To gain genetic insights into the protein-rich microalga, the transcriptome of Arthrospira platensis was sequenced using Illumina technology and de novo assembly was carried out. A total of 6023 transcripts were present in the transcriptome among which 4616 transcripts were annotated with specific functions. Gene onto...

    journal_title:Molecular biology reports

    pub_type: 杂志文章

    doi:10.1007/s11033-018-4229-1

    authors: Kumaresan V,Sannasimuthu A,Arasu MV,Al-Dhabi NA,Arockiaraj J

    更新日期:2018-10-01 00:00:00

  • Molecular characterization of a gene POLR2H encoded an essential subunit for RNA polymerase II from the Giant Panda (Ailuropoda Melanoleuca).

    abstract::The Giant Panda is an endangered and valuable gene pool in genetic, its important functional gene POLR2H encodes an essential shared peptide H of RNA polymerases. The genomic DNA and cDNA sequences were cloned successfully for the first time from the Giant Panda (Ailuropoda melanoleuca) adopting touchdown-PCR and reve...

    journal_title:Molecular biology reports

    pub_type: 杂志文章

    doi:10.1007/s11033-012-2192-9

    authors: Du YJ,Hou YL,Hou WR

    更新日期:2013-02-01 00:00:00

  • Association of matrix metalloproteinase 3 and endogenous inhibitors with inflammatory markers in mitral valve disease and calcification.

    abstract::Calcific mitral valve stenosis (MVS) is a common disease characterized by extensive remodeling of the extracellular matrix via matrix metalloproteinases (MMPs). The mechanism of calcification due to extensive matrix remodeling remains unclear. In this study, we investigated the relationship between MMP-3, tissue inhib...

    journal_title:Molecular biology reports

    pub_type: 杂志文章

    doi:10.1007/s11033-018-4372-8

    authors: Aloui S,Zidi W,Ouali S,Guizani I,Hadj-Taieb S,Mourali MS,Feki M,Allal-Elasmi M

    更新日期:2018-12-01 00:00:00

  • Unfolding Nrf2 in diabetes mellitus.

    abstract::In spite of much awareness, diabetes mellitus continues to remain one of major reasons for mortality and morbidity rate all over the globe. Free radicals cause oxidative stress which is responsible for causing diabetes. The recent advancements in elucidation of ARE/keap1/Nrf2 pathway can help in better understanding o...

    journal_title:Molecular biology reports

    pub_type: 杂志文章,评审

    doi:10.1007/s11033-020-06081-3

    authors: Behl T,Kaur I,Sehgal A,Sharma E,Kumar A,Grover M,Bungau S

    更新日期:2021-01-03 00:00:00

  • Association of GSTM1T1 genes with COPD and prostate cancer in north Indian population.

    abstract::The glutathione S-transferase (GST) family of enzymes is known to play a pivotal role in phase II of biotransformation of xenobiotics, environmental carcinogens and pharmacological drugs. The objective of the present study was to investigate the role of GSTM1 and GSTT1 null genotypes as risk factors for chronic obstru...

    journal_title:Molecular biology reports

    pub_type: 杂志文章

    doi:10.1007/s11033-010-0287-8

    authors: Thakur H,Gupta L,Sobti RC,Janmeja AK,Seth A,Singh SK

    更新日期:2011-03-01 00:00:00

  • The use of pronase for electron microscopy of protein-complexed DNA.

    abstract::A method is described which demonstrates the posibility of visualizing protein-complexed DNA by using pronase for both deproteinization and spreading of DNA for electron microscopy. The results show that proteolytic digestion is complete even under conditions of short formaldehyde fixation and pronase is an excellent ...

    journal_title:Molecular biology reports

    pub_type: 杂志文章

    doi:10.1007/BF00778415

    authors: Tsaneva I,Tsanev R

    更新日期:1979-08-31 00:00:00

  • Potential protein partners for the N-terminal domain of human topoisomerase I revealed by phage display.

    abstract::Phage display procedure was applied to the N-terminal domain of human topoisomerase I. The consensus sequence identified for clones binding to the N-terminal domain was found in 35 human proteins that are either permanently or temporarily located in the nucleus. They are in majority involved in the DNA repair, transcr...

    journal_title:Molecular biology reports

    pub_type: 杂志文章

    doi:10.1023/a:1021237021338

    authors: Trzcińska AM,Girstun A,Piekiełko A,Kowalska-Loth B,Staroń K

    更新日期:2002-12-01 00:00:00

  • The effect of NF-κB antisense oligonucleotide on transdifferentiation of fibroblast in lung tissue of mice injured by bleomycin.

    abstract::To investigate the influence of NF-κB antisense oligonucleotide on transdifferentiation of fibroblast in the pathological process of bleomycin-induced pulmonary fibrosis in mice. 6 h before molding of C57BL/6 model of pulmonary fibrosis in mice, NF-κB antisense oligonucleotide was injected from caudal vein. Then the l...

    journal_title:Molecular biology reports

    pub_type: 杂志文章

    doi:10.1007/s11033-014-3273-8

    authors: Zhou Y,Zhang X,Tan M,Zheng R,Zhao L

    更新日期:2014-06-01 00:00:00

  • Novel single nucleotide polymorphisms of bovine SREBP1 gene is association with fatty acid composition and marbling score in commercial Korean cattle (Hanwoo).

    abstract::The sterol regulatory element binding factor 1 (SREBP1) gene plays an important role in the biosynthesis of fatty acids. The aim of this study was to investigate the association between SNPs within SREBP1 gene and fatty acid composition of muscle fat and marbling score in a commercial population of Korean cattle. Amon...

    journal_title:Molecular biology reports

    pub_type: 杂志文章

    doi:10.1007/s11033-012-2055-4

    authors: Lee Y,Oh D,Lee J,La B,Yeo J

    更新日期:2013-01-01 00:00:00

  • Molecular cloning and characterization of a 2C-methyl-D: -erythritol 2,4-cyclodiphosphate synthase gene from Cephalotaxus harringtonia.

    abstract::The full-length MECPS cDNA sequence (designated as Chmecps, GenBank Accession No.: DQ415658) was isolated by rapid amplification of cDNA ends (RACE) for the first time from Cephalotaxus harringtonia. The full-length cDNA of Chmecps was 1,146 bp containing a 753 bp open reading frame (ORF) encoding a polypeptide of 250...

    journal_title:Molecular biology reports

    pub_type: 杂志文章

    doi:10.1007/s11033-008-9377-2

    authors: Chen J,Xiao Y,Di P,Yu X,Chen W,Zhang L

    更新日期:2009-09-01 00:00:00

  • Genetic characterization of Benin's wild populations of Sarotherodon melanotheron melanotheron Rüppell, 1852.

    abstract::The Cichlid fish Sarotherodon melanotheron is typically found in West and Central African estuaries and lagoons. It represents a good candidate for promoting tilapia farming in brackish waters. Understanding the genetic diversity in its populations from the hydrographical basins of Southern Benin is primordial before ...

    journal_title:Molecular biology reports

    pub_type: 杂志文章

    doi:10.1007/s11033-018-4354-x

    authors: Amoussou TO,Youssao Abdou Karim I,Dayo GK,Imorou Toko I,Séré M,Chikou A,Toguyéni A

    更新日期:2018-12-01 00:00:00

  • UV crosslinking of RNA to nylon membrane enhances hybridization signals.

    abstract::An improvement in the detection by nucleic acid hybridization of size-fractionated RNA immobilized to nylon-based membranes is described. Electrophoretic transfer of RNA to nylon membranes permits a quantitative determination of different RNA transcripts on the same membrane after sequential hybridization using differ...

    journal_title:Molecular biology reports

    pub_type: 杂志文章

    doi:10.1007/BF00364822

    authors: Khandjian EW

    更新日期:1986-01-01 00:00:00

  • Role of Spata34 in cell proliferation and its expression pattern in postnatal development of rat testis.

    abstract::Spata34 is a testis-specific-expressed gene which exerts diverse functions in testis development. This study intends to examine the expression profiles of Spata34 in postnatal rat testis, and explore its potential roles in cell proliferation in vitro. We found that the mRNA and protein expression levels of Spata34 wer...

    journal_title:Molecular biology reports

    pub_type: 杂志文章

    doi:10.1007/s11033-018-4439-6

    authors: Nie D,Li H,Liu Y,Liao Z

    更新日期:2018-12-01 00:00:00

  • Kinetic and thermodynamic study of cloned thermostable endo-1,4-β-xylanase from Thermotoga petrophila in mesophilic host.

    abstract::The 1,044 bp endo-1,4-β-xylanase gene of a hyperthermophilic Eubacterium, "Thermotoga petrophila RKU 1" (T. petrophila) was amplified, from the genomic DNA of donor bacterium, cloned and expressed in mesophilic host E. coli strain BL21 Codon plus. The extracellular target protein was purified by heat treatment followe...

    journal_title:Molecular biology reports

    pub_type: 杂志文章

    doi:10.1007/s11033-012-1555-6

    authors: ul Haq I,Hussain Z,Khan MA,Muneer B,Afzal S,Majeed S,Akram F

    更新日期:2012-07-01 00:00:00

  • Gallic and vanillic acid suppress inflammation and promote myelination in an in vitro mouse model of neurodegeneration.

    abstract::Neuroinflammation affects millions of people around the world as a result of injury or stress. Neuroinflammation represents almost all types of neurological diseases such as multiple sclerosis and Alzheimer's disease. Neurodegenerative diseases comprise demyelination and synaptic loss. The inflammatory response is fur...

    journal_title:Molecular biology reports

    pub_type: 杂志文章

    doi:10.1007/s11033-018-4557-1

    authors: Siddiqui S,Kamal A,Khan F,Jamali KS,Saify ZS

    更新日期:2019-02-01 00:00:00

  • Genomic organization and promoter analysis of a transcriptional repressor gene from Fenneropenaeus chinensis.

    abstract::In this study, we cloned and sequenced genomic sequences from a Fenneropenaeus chinensis transcriptional repressor gene, FcTR. The FcTR gene is 2,671 bp in length and has four exons and three introns. The 873 bp promoter contains several transcription factor binding sites, including a TATA box and a cyclic AMP-respons...

    journal_title:Molecular biology reports

    pub_type: 杂志文章

    doi:10.1007/s11033-014-3780-7

    authors: Lai X,Shen S,Gao H,Yan B

    更新日期:2015-02-01 00:00:00

  • Yangyin Tongnao granules enhance neurogenesis in the peri-infarct area and upregulate brain-derived neurotrophic factor and vascular endothelial growth factor after focal cerebral ischemic infarction in rats.

    abstract::Yangyin Tongnao granules (YYTNG) have been extensively applied in the treatment of brain injury, mainly due to its antioxidant effects, inhibition of apoptosis, and enhancement of blood circulation. To analyze the effect of YYTNG on the recovery of neurological function and neurogenesis in the peri-infarct area after ...

    journal_title:Molecular biology reports

    pub_type: 杂志文章

    doi:10.1007/s11033-019-04824-5

    authors: Wang Y,Yang J,Du H,Zhang H,Wan H,He Y

    更新日期:2019-08-01 00:00:00

  • RA induces the neural-like cells generated from epigenetic modified NIH/3T3 cells.

    abstract::Recently, differentiated somatic cells had been reprogrammed to pluripotential state in vitro, and various tissue cells had been elicited from those cells. Epigenetic modifications allow differentiated cells to perpetuate the molecular memory needed for the cells to retain their identity. DNA methylation and histone d...

    journal_title:Molecular biology reports

    pub_type: 杂志文章

    doi:10.1007/s11033-009-9489-3

    authors: Zhang XM,Li QM,Su DJ,Wang N,Shan ZY,Jin LH,Lei L

    更新日期:2010-03-01 00:00:00