Taxonomic reassessment of the genus Dichotomius (Coleoptera: Scarabaeinae) through integrative taxonomy.

Abstract:

:Dung beetles of the subfamily Scarabaeinae are widely recognised as important providers of multiple ecosystem services and are currently experiencing revisions that have improved our understanding of higher-level relationships in the subfamily. However, the study of phylogenetic relationships at the level of genus or species is still lagging behind. In this study we investigated the New World beetle genus Dichotomius, one of the richest within the New World Scarabaeinae, using the most comprehensive molecular and morphological dataset for the genus to date (in terms of number of species and individuals). Besides evaluating phylogenetic relationships, we also assessed species delimitation through a novel Bayesian approach (iBPP) that enables morphological and molecular data to be combined. Our findings support the monophyly of the genus Dichotomius but not that of the subgenera Selenocopris and Dichotomius sensu stricto (s.s). Also, our results do not support the recent synonymy of Selenocopris with Luederwaldtinia. Some species-groups within the genus were recovered, and seem associated with elevational distribution. Our species delimitation analyses were largely congruent irrespective of the set of parameters applied, but the most robust results were obtained when molecular and morphological data were combined. Although our current sampling and analyses were not powerful enough to make definite interpretations on the validity of all species evaluated, we can confidently recognise D. nisus, D. belus and D. mamillatus as valid and well differentiated species. Overall, our study provides new insights into the phylogenetic relationships and classification of dung beetles and has broad implications for their systematics and evolutionary analyses.

journal_name

PeerJ

journal_title

PeerJ

authors

Pardo-Diaz C,Lopera Toro A,Peña Tovar SA,Sarmiento-Garcés R,Sanchez Herrera M,Salazar C

doi

10.7717/peerj.7332

subject

Has Abstract

pub_date

2019-08-05 00:00:00

pages

e7332

issn

2167-8359

pii

7332

journal_volume

7

pub_type

杂志文章

相关文献

PeerJ文献大全
  • Retrospective observation of drug susceptibility of Candida strains in the years 1999, 2004, and 2015.

    abstract:INTRODUCTION:There is much literature devoted to the problem of drug resistance and decreased susceptibility of fungi to commonly used antifungals. AIM:To analyze drug susceptibility of Candida albicans and non-Candida albicans strains isolated from the hands of people without any symptoms of disease over a 16-year pe...

    journal_title:PeerJ

    pub_type: 杂志文章

    doi:10.7717/peerj.3038

    authors: Łukaszuk C,Krajewska-Kułak E,Kułak W

    更新日期:2017-02-23 00:00:00

  • Tnni1b-ECR183-d2, an 87 bp cardiac enhancer of zebrafish.

    abstract:Background:Several heart malformations are associated with mutations in the regulatory regions of cardiac genes. Troponin I type 1b (tnni1b) is important for the formation of the atrioventricular canal in zebrafish hearts; however, the regulation of tnni1b is poorly understand. We aimed to identify a small but function...

    journal_title:PeerJ

    pub_type: 杂志文章

    doi:10.7717/peerj.10289

    authors: Zhang Y,Wang F,Wu F,Wang Y,Wang X,Gui Y,Li Q

    更新日期:2020-11-04 00:00:00

  • Spectral characteristics of the mutant form GGBP/H152C of D-glucose/D-galactose-binding protein labeled with fluorescent dye BADAN: influence of external factors.

    abstract::The mutant form GGBP/H152C of the D-glucose/D-galactose-binding protein with the solvatochromic dye BADAN linked to cysteine residue Cys 152 can be used as a potential base for a sensitive element of glucose biosensor system. We investigated the influence of various external factors on the physical-chemical properties...

    journal_title:PeerJ

    pub_type: 杂志文章

    doi:10.7717/peerj.275

    authors: Fonin AV,Stepanenko OV,Povarova OI,Volova CA,Philippova EM,Bublikov GS,Kuznetsova IM,Demchenko AP,Turoverov KK

    更新日期:2014-03-18 00:00:00

  • Rosiglitazone accelerates wound healing by improving endothelial precursor cell function and angiogenesis in db/db mice.

    abstract:Background & Aims:Endothelial precursor cell (EPC) dysfunction is one of the risk factors for diabetes mellitus (DM) which results in delayed wound healing. Rosiglitazone (RSG) is a frequently prescribed oral glucose-lowering drug. Previous studies have shown the positive effects of RSG on ameliorating EPC dysfunction ...

    journal_title:PeerJ

    pub_type: 杂志文章

    doi:10.7717/peerj.7815

    authors: Zhou G,Han X,Wu Z,Shi Q,Bao X

    更新日期:2019-10-17 00:00:00

  • Osteogenesis imperfecta: potential therapeutic approaches.

    abstract::Osteogenesis imperfecta (OI) is a genetic disorder that is usually caused by disturbed production of collagen type I. Depending on its severity in the patient, this disorder may create difficulties and challenges for the dental practitioner. The goal of this article is to provide guidelines based on scientific evidenc...

    journal_title:PeerJ

    pub_type: 杂志文章

    doi:10.7717/peerj.5464

    authors: Rousseau M,Retrouvey JM,Members of the Brittle Bone Disease Consortium.

    更新日期:2018-08-17 00:00:00

  • Isthminia panamensis, a new fossil inioid (Mammalia, Cetacea) from the Chagres Formation of Panama and the evolution of 'river dolphins' in the Americas.

    abstract::In contrast to dominant mode of ecological transition in the evolution of marine mammals, different lineages of toothed whales (Odontoceti) have repeatedly invaded freshwater ecosystems during the Cenozoic era. The so-called 'river dolphins' are now recognized as independent lineages that converged on similar morpholo...

    journal_title:PeerJ

    pub_type: 杂志文章

    doi:10.7717/peerj.1227

    authors: Pyenson ND,Vélez-Juarbe J,Gutstein CS,Little H,Vigil D,O'Dea A

    更新日期:2015-09-01 00:00:00

  • Effects of agricultural management on phyllosphere fungal diversity in vineyards and the association with adjacent native forests.

    abstract::Agriculture is one of the main drivers of land conversion, and agriculture practices can impact on microbial diversity. Here we characterized the phyllosphere fungal diversity associated with Carménère grapevines under conventional and organic agricultural management. We also explored the fungal diversity present in t...

    journal_title:PeerJ

    pub_type: 杂志文章

    doi:10.7717/peerj.5715

    authors: Castañeda LE,Miura T,Sánchez R,Barbosa O

    更新日期:2018-10-29 00:00:00

  • Body composition estimation from selected slices: equations computed from a new semi-automatic thresholding method developed on whole-body CT scans.

    abstract:BACKGROUND:Estimating volumes and masses of total body components is important for the study and treatment monitoring of nutrition and nutrition-related disorders, cancer, joint replacement, energy-expenditure and exercise physiology. While several equations have been offered for estimating total body components from M...

    journal_title:PeerJ

    pub_type: 杂志文章

    doi:10.7717/peerj.3302

    authors: Lacoste Jeanson A,Dupej J,Villa C,Brůžek J

    更新日期:2017-05-18 00:00:00

  • Comparative genomics of Synechococcus and proposal of the new genus Parasynechococcus.

    abstract::Synechococcus is among the most important contributors to global primary productivity. The genomes of several strains of this taxon have been previously sequenced in an effort to understand the physiology and ecology of these highly diverse microorganisms. Here we present a comparative study of Synechococcus genomes. ...

    journal_title:PeerJ

    pub_type: 杂志文章

    doi:10.7717/peerj.1522

    authors: Coutinho F,Tschoeke DA,Thompson F,Thompson C

    更新日期:2016-01-14 00:00:00

  • Jaw anatomy of Potamogale velox (Tenrecidae, Afrotheria) with a focus on cranial arteries and the coronoid canal in mammals.

    abstract::Afrotheria is a strongly supported clade within placental mammals, but morphological synapomorphies for the entire group have only recently come to light. Soft tissue characters represent an underutilized source of data for phylogenetic analysis, but nonetheless provide features shared by some or all members of Afroth...

    journal_title:PeerJ

    pub_type: 杂志文章

    doi:10.7717/peerj.1906

    authors: Brocklehurst RJ,Crumpton N,Button E,Asher RJ

    更新日期:2016-04-12 00:00:00

  • Love the one you're with: replicate viral adaptations converge on the same phenotypic change.

    abstract::Parallelism is important because it reveals how inherently stochastic adaptation is. Even as we come to better understand evolutionary forces, stochasticity limits how well we can predict evolutionary outcomes. Here we sought to quantify parallelism and some of its underlying causes by adapting a bacteriophage (ID11) ...

    journal_title:PeerJ

    pub_type: 杂志文章

    doi:10.7717/peerj.2227

    authors: Miller CR,Nagel AC,Scott L,Settles M,Joyce P,Wichman HA

    更新日期:2016-07-19 00:00:00

  • Nanocontainer designed from an infectious hypodermal and hematopoietic necrosis virus (IHHNV) has excellent physical stability and ability to deliver shrimp tissues.

    abstract:Background:A virus-like particle (VLP) is an excellent tool for a compound delivery system due to its simple composition, symmetrical structure and self-assembly. Its surface modification both chemically and genetically is established, leading to the target-specific delivery and improved encapsulation efficiency. Howev...

    journal_title:PeerJ

    pub_type: 杂志文章

    doi:10.7717/peerj.6079

    authors: Kiatmetha P,Chotwiwatthanakun C,Jariyapong P,Santimanawong W,Ounjai P,Weerachatyanukul W

    更新日期:2018-12-18 00:00:00

  • Cryptic diversity among Yazoo Darters (Percidae: Etheostoma raneyi) in disjunct watersheds of northern Mississippi.

    abstract::The Yazoo Darter, Etheostoma raneyi (Percidae), is an imperiled freshwater fish species endemic to tributaries of the Yocona and Little Tallahatchie rivers of the upper Yazoo River basin, in northern Mississippi, USA. The two populations are allopatric, isolated by unsuitable lowland habitat between the two river drai...

    journal_title:PeerJ

    pub_type: 杂志文章

    doi:10.7717/peerj.9014

    authors: Sterling KA,Nielsen SV,Brown AJ,Warren ML Jr,Noonan BP

    更新日期:2020-05-04 00:00:00

  • Effects of rhodioloside on the neurological functions of rats with total cerebral ischemia/reperfusion and cone neuron injury in the hippocampal CA1 region.

    abstract::Rhodioloside, the main effective constituent of Rhodiola rosea, demonstrates antiaging and antioxidative stress functions and inhibits calcium overloading in cells. These functions imply that rhodioloside may exert protective effects on hippocampal neurons after total cerebral ischemia/reperfusion injury. In this stud...

    journal_title:PeerJ

    pub_type: 杂志文章

    doi:10.7717/peerj.10056

    authors: Zhang Y,Guo X,Wang G,Liu J,Liang P,Wang H,Zhu C,Wu Q

    更新日期:2020-11-09 00:00:00

  • Low-carbohydrate diets differing in carbohydrate restriction improve cardiometabolic and anthropometric markers in healthy adults: A randomised clinical trial.

    abstract:Background:Low-carbohydrate, high-fat (LCHF) diets are useful for treating a range of health conditions, but there is little research evaluating the degree of carbohydrate restriction on outcome measures. This study compares anthropometric and cardiometabolic outcomes between differing carbohydrate-restricted diets. O...

    journal_title:PeerJ

    pub_type: 杂志文章

    doi:10.7717/peerj.6273

    authors: Harvey CJDC,Schofield GM,Zinn C,Thornley SJ,Crofts C,Merien FLR

    更新日期:2019-02-05 00:00:00

  • Evolution of the scholarly mega-journal, 2006-2017.

    abstract::Mega-journals are a new kind of scholarly journal made possible by electronic publishing. They are open access (OA) and funded by charges, which authors pay for the publishing services. What distinguishes mega-journals from other OA journals is, in particular, a peer review focusing only on scientific trustworthiness....

    journal_title:PeerJ

    pub_type: 杂志文章

    doi:10.7717/peerj.4357

    authors: Björk BC

    更新日期:2018-02-09 00:00:00

  • Self-centeredness and selflessness: happiness correlates and mediating psychological processes.

    abstract::The main objective of this research was to test central assumptions from the Self-centeredness/Selflessness Happiness Model. According to this model, while self-centered psychological functioning induces fluctuating happiness, authentic-durable happiness results from selflessness. Distinct mediating processes are supp...

    journal_title:PeerJ

    pub_type: 杂志文章

    doi:10.7717/peerj.3306

    authors: Dambrun M

    更新日期:2017-05-11 00:00:00

  • Epidemiology of Salmonella sp. in California cull dairy cattle: prevalence of fecal shedding and diagnostic accuracy of pooled enriched broth culture of fecal samples.

    abstract:BACKGROUND:The primary objective of this cross-sectional study was to estimate the crude, seasonal and cull-reason stratified prevalence of Salmonella fecal shedding in cull dairy cattle on seven California dairies. A secondary objective was to estimate and compare the relative sensitivity (Se) and specificity (Sp) for...

    journal_title:PeerJ

    pub_type: 杂志文章

    doi:10.7717/peerj.2386

    authors: Abu Aboud OA,Adaska JM,Williams DR,Rossitto PV,Champagne JD,Lehenbauer TW,Atwill R,Li X,Aly SS

    更新日期:2016-08-30 00:00:00

  • Evaluation of a new Argovit as an antiviral agent included in feed to protect the shrimp Litopenaeus vannamei against White Spot Syndrome Virus infection.

    abstract::In this study, four experimental assays were conducted to evaluate the use of a new silver nanoparticle formulation named Argovit-4, which was prepared with slight modifications to enhance its biological activity against white spot syndrome virus (WSSV) in shrimp culture. The goals of these assays were to (1) determin...

    journal_title:PeerJ

    pub_type: 杂志文章

    doi:10.7717/peerj.8446

    authors: Romo-Quiñonez CR,Álvarez-Sánchez AR,Álvarez-Ruiz P,Chávez-Sánchez MC,Bogdanchikova N,Pestryakov A,Mejia-Ruiz CH

    更新日期:2020-02-27 00:00:00

  • Climatic niche comparison across a cryptic species complex.

    abstract::According to current molecular evidence, the Chionaspis pinifoliae heterophyllae species complex has been recognized as 10 cryptic species. In this study, we construct potential distribution maps for seven cryptic species based on climatic variables. This was done to assess the main environmental factors that have con...

    journal_title:PeerJ

    pub_type: 杂志文章

    doi:10.7717/peerj.7042

    authors: Zhao Q,Zhang H,Wei J

    更新日期:2019-05-31 00:00:00

  • Physician consultation in young children with recurrent pain-a population-based study.

    abstract::Background. Recurrent pain is a common experience in childhood, but only few children with recurrent pain attend a physician. Previous studies yielded conflicting findings with regard to predictors of health care utilization in children with recurrent pain. Methods. The present study analyzes data from the German Heal...

    journal_title:PeerJ

    pub_type: 杂志文章

    doi:10.7717/peerj.916

    authors: Hirschfeld G,Wager J,Zernikow B

    更新日期:2015-04-28 00:00:00

  • Combining UAV-based hyperspectral imagery and machine learning algorithms for soil moisture content monitoring.

    abstract::Soil moisture content (SMC) is an important factor that affects agricultural development in arid regions. Compared with the space-borne remote sensing system, the unmanned aerial vehicle (UAV) has been widely used because of its stronger controllability and higher resolution. It also provides a more convenient method ...

    journal_title:PeerJ

    pub_type: 杂志文章

    doi:10.7717/peerj.6926

    authors: Ge X,Wang J,Ding J,Cao X,Zhang Z,Liu J,Li X

    更新日期:2019-05-03 00:00:00

  • Transcriptome analysis of immature xylem in the Chinese fir at different developmental phases.

    abstract::Background.Chinese fir [Cunninghamia lanceolata (Lamb.) Hook.] is one of the most important native tree species for timber production in southern China. An understanding of overall fast growing stage, stem growth stage and senescence stage cambium transcriptome variation is lacking. We used transcriptome sequencing to...

    journal_title:PeerJ

    pub_type: 杂志文章

    doi:10.7717/peerj.2097

    authors: Zhang Y,Han X,Sang J,He X,Liu M,Qiao G,Zhuo R,He G,Hu J

    更新日期:2016-06-07 00:00:00

  • On the intrinsic sterility of 3D printing.

    abstract::3D printers that build objects using extruded thermoplastic are quickly becoming commonplace tools in laboratories. We demonstrate that with appropriate handling, these devices are capable of producing sterile components from a non-sterile feedstock of thermoplastic without any treatment after fabrication. The fabrica...

    journal_title:PeerJ

    pub_type: 杂志文章

    doi:10.7717/peerj.2661

    authors: Neches RY,Flynn KJ,Zaman L,Tung E,Pudlo N

    更新日期:2016-12-01 00:00:00

  • A miniature inverted-repeat transposable element, AddIn-MITE, located inside a WD40 gene is conserved in Andropogoneae grasses.

    abstract::Miniature inverted-repeat transposable elements (MITEs) have been associated with genic regions in plant genomes and may play important roles in the regulation of nearby genes via recruitment of small RNAs (sRNA) to the MITEs loci. We identified eight families of MITEs in the sugarcane genome assembly with MITE-Hunter...

    journal_title:PeerJ

    pub_type: 杂志文章

    doi:10.7717/peerj.6080

    authors: Grativol C,Thiebaut F,Sangi S,Montessoro P,Santos WDS,Hemerly AS,Ferreira PCG

    更新日期:2019-01-11 00:00:00

  • Systematics of stalked jellyfishes (Cnidaria: Staurozoa).

    abstract::Staurozoan classification is highly subjective, based on phylogeny-free inferences, and suborders, families, and genera are commonly defined by homoplasies. Additionally, many characters used in the taxonomy of the group have ontogenetic and intraspecific variation, and demand new and consistent assessments to establi...

    journal_title:PeerJ

    pub_type: 杂志文章

    doi:10.7717/peerj.1951

    authors: Miranda LS,Hirano YM,Mills CE,Falconer A,Fenwick D,Marques AC,Collins AG

    更新日期:2016-05-05 00:00:00

  • New records of a lost species and a geographic range expansion for sengis in the Horn of Africa.

    abstract::The Somali Sengi or Somali Elephant-shrew ('Elephantulus' revoilii, Macroscelidea, Mammalia) has been considered a "lost species" and is primarily known from about 39 museum specimens, with no new vouchered occurrence records since the early 1970s. The scientific literature contains no data concerning living Somali Se...

    journal_title:PeerJ

    pub_type: 杂志文章

    doi:10.7717/peerj.9652

    authors: Heritage S,Rayaleh H,Awaleh DG,Rathbun GB

    更新日期:2020-08-18 00:00:00

  • Protein signatures using electrostatic molecular surfaces in harmonic space.

    abstract::We developed a novel method based on the Fourier analysis of protein molecular surfaces to speed up the analysis of the vast structural data generated in the post-genomic era. This method computes the power spectrum of surfaces of the molecular electrostatic potential, whose three-dimensional coordinates have been eit...

    journal_title:PeerJ

    pub_type: 杂志文章

    doi:10.7717/peerj.185

    authors: Carvalho CS,Vlachakis D,Tsiliki G,Megalooikonomou V,Kossida S

    更新日期:2013-10-22 00:00:00

  • Analysis of the spike, ORF3, and nucleocapsid genes of porcine epidemic diarrhea virus circulating on Thai swine farms, 2011-2016.

    abstract::Porcine epidemic diarrhea virus (PEDV) outbreaks on pig farms have caused significant economic loss in the swine industry since it was first reported in Thailand a decade ago. Anecdotal evidence suggests that PEDV is now endemic in this region, therefore genome information of circulating PEDV is important for molecula...

    journal_title:PeerJ

    pub_type: 杂志文章

    doi:10.7717/peerj.6843

    authors: Tuanthap S,Vongpunsawad S,Phupolphan C,Duang-In A,Wattanaphansak S,Assavacheep P,Theamboonlers A,Luengyosluechakul S,Amonsin A,Poovorawan Y

    更新日期:2019-04-30 00:00:00

  • Association between herd management practices and antimicrobial resistance in Salmonella spp. from cull dairy cattle in Central California.

    abstract:Background:In this study cull dairy cows from six California dairy herds were sampled seasonally over the course of a year. The objectives were to determine the prevalence of antimicrobial resistant (AMR) Salmonella spp. shed in cull cow feces, and the factors associated with fecal shedding of AMR and multidrug resista...

    journal_title:PeerJ

    pub_type: 杂志文章

    doi:10.7717/peerj.6546

    authors: Pereira R,Williams DR,Rossitto P,Adaska J,Okello E,Champagne J,Lehenbauer TW,Li X,Chase J,Nguyen T,Pires AFA,Atwill ER,Aly SS

    更新日期:2019-03-21 00:00:00