A genetic-phenotypic classification for syndromic micrognathia.

Abstract:

:Micrognathia is a common craniofacial deformity which represents hypoplastic development of the mandible, accompanied by retrognathia and consequent airway problems. Usually, micrognathia is accompanied by multiple systematic defects, known as syndromic micrognathia, and is in close association with genetic factors. Now, large quantities of pathogenic genes of syndromic micrognathia have been revealed. However, how these different pathogenic genes could lead to similar phenotypes, and whether there are some common characteristics among these pathogenic genes are still unknown. In this study, we proposed a genetic-phenotypic classification of syndromic micrognathia based on pathogenic genes information obtained from Phenolyzer, DAVID, OMIM, and PubMed database. Pathogenic genes of syndromic micrognathia could be divided into four groups based on gene function, including cellular processes and structures, cell metabolism, cartilage and bone development, and neuromuscular function. In addition, these four groups exhibited various clinical characteristics, and the affected systems, such as central nervous system, skeletal system, cardiovascular system, oral and dental system, respiratory system and muscle, were different in these four groups. This classification could provide meaningful insights into the pathogenesis of syndromic micrognathia, and offer some clues for understanding the molecular mechanism, as well as guiding precise clinical diagnosis and treatment for syndromic micrognathia.

journal_name

J Hum Genet

authors

Chen Q,Zhao Y,Qian Y,Lu C,Shen G,Dai J

doi

10.1038/s10038-019-0630-4

subject

Has Abstract

pub_date

2019-09-01 00:00:00

pages

875-883

issue

9

eissn

1434-5161

issn

1435-232X

pii

10.1038/s10038-019-0630-4

journal_volume

64

pub_type

杂志文章
  • Quantifying the uncertainty in heritability.

    abstract::The use of mixed models to determine narrow-sense heritability and related quantities such as SNP heritability has received much recent attention. Less attention has been paid to the inherent variability in these estimates. One approach for quantifying variability in estimates of heritability is a frequentist approach...

    journal_title:Journal of human genetics

    pub_type: 杂志文章

    doi:10.1038/jhg.2014.15

    authors: Furlotte NA,Heckerman D,Lippert C

    更新日期:2014-05-01 00:00:00

  • APOBEC3H polymorphisms and susceptibility to HIV-1 infection in an Indian population.

    abstract::Human APOBEC3H (A3H) is a member of APOBEC cytidine deaminase family intensively constraining the HIV-1 replication. A3H is known to be polymorphic with different protein stability and anti-HIV-1 activity in vitro. We recently reported that A3H haplotypes composed of two functional polymorphisms, rs139292 (N15del) and...

    journal_title:Journal of human genetics

    pub_type: 杂志文章

    doi:10.1038/jhg.2015.136

    authors: Naruse TK,Sakurai D,Ohtani H,Sharma G,Sharma SK,Vajpayee M,Mehra NK,Kaur G,Kimura A

    更新日期:2016-03-01 00:00:00

  • Nineteen-year follow-up of a patient with severe glutathione synthetase deficiency.

    abstract::Glutathione synthetase deficiency is a rare autosomal recessive disorder resulting in low levels of glutathione and an increased susceptibility to oxidative stress. Patients with glutathione synthetase deficiency typically present in the neonatal period with hemolytic anemia, metabolic acidosis and neurological impair...

    journal_title:Journal of human genetics

    pub_type: 杂志文章

    doi:10.1038/jhg.2016.20

    authors: Atwal PS,Medina CR,Burrage LC,Sutton VR

    更新日期:2016-07-01 00:00:00

  • A novel GDAP1 Q218E mutation in autosomal dominant Charcot-Marie-Tooth disease.

    abstract::A wide range of phenotypes have been reported in autosomal recessive (AR) Charcot-Marie-Tooth disease (CMT) patients carrying mutations in the ganglioside-induced differentiation-associated protein 1 (GDAP1) gene, such as axonal, demyelinating, and intermediate forms of AR CMT. There have been very few reports of GDAP...

    journal_title:Journal of human genetics

    pub_type: 杂志文章

    doi:10.1007/s10038-008-0249-3

    authors: Chung KW,Kim SM,Sunwoo IN,Cho SY,Hwang SJ,Kim J,Kang SH,Park KD,Choi KG,Choi IS,Choi BO

    更新日期:2008-01-01 00:00:00

  • Four sisters compound heterozygotes for the pre- and full mutation in fragile X syndrome and a complete inactivation of X-functional chromosome: implications for genetic counseling.

    abstract::Fragile X syndrome (FXS) is a neurodevelopmental disorder and a leading monogenic form of cognitive impairment and autism. It is the most common form of inherited mental retardation in males and a significant cause of mental retardation in females. It is caused by the instability and subsequent expansion of the CGG re...

    journal_title:Journal of human genetics

    pub_type: 杂志文章

    doi:10.1038/jhg.2010.140

    authors: Martorell L,Nascimento MT,Colome R,Genovés J,Naudó M,Nascimento A

    更新日期:2011-01-01 00:00:00

  • Mutation spectrum of MMACHC in Chinese patients with combined methylmalonic aciduria and homocystinuria.

    abstract::The cblC type of combined methylmalonic aciduria (MMA) and homocystinuria (HC) is the most common inborn error of vitamin B(12) metabolism and is caused by mutations in the MMACHC gene. To elucidate the spectrum of mutations that causes combined MMA and HC in Chinese patients, the MMACHC gene was sequenced in 79 unrel...

    journal_title:Journal of human genetics

    pub_type: 杂志文章

    doi:10.1038/jhg.2010.81

    authors: Liu MY,Yang YL,Chang YC,Chiang SH,Lin SP,Han LS,Qi Y,Hsiao KJ,Liu TT

    更新日期:2010-09-01 00:00:00

  • De novo 617G-A nucleotide mutation in the ACVR1 gene in a Taiwanese patient with fibrodysplasia ossificans progressiva.

    abstract::Fibrodysplasia ossificans progressiva (FOP) is a rare congenital disease with autosomal dominant transmission characterized by the presence of malformations of the big toes and of postnatal progressive heterotopic endochondral osteogenesis. We report the case of 3-year-old girl with dysplasia of the first metatarsal b...

    journal_title:Journal of human genetics

    pub_type: 杂志文章

    doi:10.1007/s10038-006-0069-2

    authors: Lin GT,Chang HW,Liu CS,Huang PJ,Wang HC,Cheng YM

    更新日期:2006-01-01 00:00:00

  • In vivo genome editing via the HITI method as a tool for gene therapy.

    abstract::Using genome-editing technologies to correct specific mutations represents a potentially transformative new approach for treating genetic disorders. Despite rapid advances in the field of genome editing, it is still unclear whether the long-standing goal of in vivo targeted transgene integration is feasible. This is p...

    journal_title:Journal of human genetics

    pub_type: 杂志文章,评审

    doi:10.1038/s10038-017-0352-4

    authors: Suzuki K,Izpisua Belmonte JC

    更新日期:2018-02-01 00:00:00

  • Identification of biallelic EXTL3 mutations in a novel type of spondylo-epi-metaphyseal dysplasia.

    abstract::Spondylo-epi-metaphyseal dysplasia (SEMD) is a group of inherited skeletal diseases characterized by the anomalies in spine, epiphyses and metaphyses. SEMD is highly heterogeneous and >20 distinct entities have been identified. Here we describe a novel type of SEMD in two unrelated Turkish patients who presented with ...

    journal_title:Journal of human genetics

    pub_type: 杂志文章

    doi:10.1038/jhg.2017.38

    authors: Guo L,Elcioglu NH,Mizumoto S,Wang Z,Noyan B,Albayrak HM,Yamada S,Matsumoto N,Miyake N,Nishimura G,Ikegawa S

    更新日期:2017-08-01 00:00:00

  • HLA and CTLA4 polymorphisms may confer a synergistic risk in the susceptibility to Graves' disease.

    abstract::Graves' disease (GD) is an autoimmune disease characterized by hyperthyroidism due to the presence of autoantibodies against thyroid-stimulating hormone receptor, which is measured as thyroid-stimulating hormone-binding inhibitory immunoglobulin (TBII). Most of the GD patients are TBII-positive, but TBII is undetectab...

    journal_title:Journal of human genetics

    pub_type: 杂志文章

    doi:10.1038/jhg.2010.20

    authors: Takahashi M,Kimura A

    更新日期:2010-05-01 00:00:00

  • Effect of enzyme replacement therapy on the growth of patients with Morquio A.

    abstract::Mucopolysaccharidosis IVA (MPS IVA) is a degenerative systemic skeletal dysplasia, in which children exhibit marked short stature and become physically handicapped. This study evaluated the growth patterns of patients treated with enzyme replacement therapy (ERT), compared with those of untreated patients. Cross-secti...

    journal_title:Journal of human genetics

    pub_type: 杂志文章

    doi:10.1038/s10038-019-0604-6

    authors: Doherty C,Stapleton M,Piechnik M,Mason RW,Mackenzie WG,Yamaguchi S,Kobayashi H,Suzuki Y,Tomatsu S

    更新日期:2019-07-01 00:00:00

  • Characterization of genomic rearrangements of the alpha1-acid glycoprotein/orosomucoid gene in Ghanaians.

    abstract::In this study, the structure of the alpha1-acid glycoprotein (AGP), or orosomucoid (ORM), gene was investigated in a Ghanaian mother and her child, who shared an unusual variant, ORM1 S2(C), found by isoelectric focusing. Three remarkable changes of nucleotide sequence were observed: (1) The two ORM1 alleles, ORMI*S a...

    journal_title:Journal of human genetics

    pub_type: 杂志文章

    doi:10.1007/s100380170023

    authors: Yuasa I,Nakamura H,Henke L,Henke J,Nakagawa M,Irizawa Y,Umetsu K

    更新日期:2001-01-01 00:00:00

  • DNA polymorphisms in ITPA including basis of inosine triphosphatase deficiency.

    abstract::Intracellular concentrations of the nucleotide inosine triphosphate (ITP) are regulated by ITP-ase (EC 3.6.1.19), which is encoded by ITPA on chromosome 20p. Subjects with complete deficiency of ITP-ase activity (MIM 147520) have elevated ITP concentrations in erythrocytes, but no obvious clinical abnormalities. Based...

    journal_title:Journal of human genetics

    pub_type: 杂志文章

    doi:10.1007/s100380200095

    authors: Cao H,Hegele RA

    更新日期:2002-01-01 00:00:00

  • Strategies for genome-wide association studies: optimization of study designs by the stepwise focusing method.

    abstract::Recently, the use of genome-wide linkage disequilibrium (LD) analysis to localize traits has attracted much attention because of the introduction of high-throughput genotyping systems. However, a limitation of such studies is often the total cost of genotyping in addition to sample size. Therefore, it is important to ...

    journal_title:Journal of human genetics

    pub_type: 杂志文章

    doi:10.1007/s100380200050

    authors: Saito A,Kamatani N

    更新日期:2002-01-01 00:00:00

  • Characterization of the human nasal embryonic LHRH factor gene, NELF, and a mutation screening among 65 patients with idiopathic hypogonadotropic hypogonadism (IHH).

    abstract::As the mouse nasal embryonic LHRH factor gene (Nelf) encodes a guidance molecule for the migration of the olfactory axon and gonadotropin-releasing hormone neurons, its human homolog, NELF, is a candidate gene for Kallmann syndrome, a disease of idiopathic hypogonadotropic hypogonadism (IHH) with anosmia or hyposmia. ...

    journal_title:Journal of human genetics

    pub_type: 杂志文章

    doi:10.1007/s10038-004-0137-4

    authors: Miura K,Acierno JS Jr,Seminara SB

    更新日期:2004-01-01 00:00:00

  • Haplotype-based analysis of alpha 2A, 2B, and 2C adrenergic receptor genes captures information on common functional loci at each gene.

    abstract::The alpha 2-adrenergic receptors (alpha2-AR) mediate physiological effects of epinephrine and norepinephrine. Three genes encode alpha2-AR subtypes carrying common functional polymorphisms (ADRA2A Asn251Lys, ADRA2B Ins/Del301-303 and ADRA2C Ins/Del322-325). We genotyped these functional markers plus a panel of single ...

    journal_title:Journal of human genetics

    pub_type: 杂志文章

    doi:10.1007/s10038-004-0211-y

    authors: Belfer I,Buzas B,Hipp H,Phillips G,Taubman J,Lorincz I,Evans C,Lipsky RH,Enoch MA,Max MB,Goldman D

    更新日期:2005-01-01 00:00:00

  • Polyalanine expansion of PHOX2B in congenital central hypoventilation syndrome: rs17884724:A>C is associated with 7-alanine expansion.

    abstract::With congenital central hypoventilation syndrome (CCHS), most patients have a de novo 5-13 polyalanine expansion mutation in PHOX2B. We reported previously that de novo polyalanine expansion mutations were of paternal origin and were derived from unequal sister chromatid exchange during spermatogenesis in six and four...

    journal_title:Journal of human genetics

    pub_type: 杂志文章

    doi:10.1038/jhg.2009.109

    authors: Arai H,Otagiri T,Sasaki A,Umetsu K,Hayasaka K

    更新日期:2010-01-01 00:00:00

  • Gender bias in the multiethnic genetic composition of central Argentina.

    abstract::A sample of central Argentina (Córdoba) was genotyped for the first hypervariable region (HVS-I) plus a set of coding region mitochondrial DNA (mtDNA) single nucleotide polymorphisms (SNPs) (N = 102) and compared with a data set of Y-chromosome short tandem repeats (Y-STRs; N = 100) previously genotyped in the same in...

    journal_title:Journal of human genetics

    pub_type: 杂志文章

    doi:10.1007/s10038-008-0297-8

    authors: Salas A,Jaime JC,Álvarez-Iglesias V,Carracedo Á

    更新日期:2008-01-01 00:00:00

  • Association between genetic variation in the gene for death-associated protein-3 (DAP3) and adult asthma.

    abstract::Lung epithelium plays a central role in modulation of the lung inflammatory response, and lung repair and airway epithelial cells are targets in asthma and viral infection. Activated T lymphocytes release cytokines such as interferon-gamma (IFN-gamma) that induce apoptosis, or programmed cell death, of damaged epithel...

    journal_title:Journal of human genetics

    pub_type: 杂志文章

    doi:10.1007/s10038-004-0161-4

    authors: Hirota T,Obara K,Matsuda A,Akahoshi M,Nakashima K,Hasegawa K,Takahashi N,Shimizu M,Sekiguchi H,Kokubo M,Doi S,Fujiwara H,Miyatake A,Fujita K,Enomoto T,Kishi F,Suzuki Y,Saito H,Nakamura Y,Shirakawa T,Tamari M

    更新日期:2004-01-01 00:00:00

  • Clinical characterization and further confirmation of the autosomal recessive SLC12A2 disease.

    abstract::Heterozygous pathogenic variants in SLC12A2 are reported in patients with nonsyndromic hearing loss. Recently, homozygous loss-of-function variants have been reported in two patients with syndromic intellectual disability, with or without hearing loss. However, the clinical and molecular spectrum of SLC12A2 disease ha...

    journal_title:Journal of human genetics

    pub_type: 杂志文章

    doi:10.1038/s10038-021-00904-2

    authors: Bilal Shamsi M,Saleh M,Almuntashri M,Alharby E,Samman M,Peake RWA,Al-Fadhli FM,Alasmari A,Faqeih EA,Almontashiri NAM

    更新日期:2021-01-27 00:00:00

  • Different roles of MTHFR C677T and A1298C polymorphisms in colorectal adenoma and colorectal cancer: a meta-analysis.

    abstract::Association studies on the MTHFR polymorphisms (C677T and A1298C) in colorectal cancer (CRC) and colorectal adenoma have shown conflicting results. We performed a meta-analysis to better assess the purported associations. Overall, the 677T allele (10,131 patients and 15,362 controls) showed a small but significant pro...

    journal_title:Journal of human genetics

    pub_type: 杂志文章,meta分析

    doi:10.1007/s10038-006-0082-5

    authors: Huang Y,Han S,Li Y,Mao Y,Xie Y

    更新日期:2007-01-01 00:00:00

  • MicroRNA-141 confers resistance to cisplatin-induced apoptosis by targeting YAP1 in human esophageal squamous cell carcinoma.

    abstract::MicroRNAs (miRNAs) are endogenous non-coding RNAs that function as negative regulators of gene expression. Alterations in miRNA expression have been shown to affect tumor growth and response to chemotherapy. In this study, we explored the possible role of miRNAs in cisplatin resistance in esophageal squamous cell carc...

    journal_title:Journal of human genetics

    pub_type: 杂志文章

    doi:10.1038/jhg.2011.1

    authors: Imanaka Y,Tsuchiya S,Sato F,Shimada Y,Shimizu K,Tsujimoto G

    更新日期:2011-04-01 00:00:00

  • Autosomal dominant cutis laxa with progeroid features due to a novel, de novo mutation in ALDH18A1.

    abstract::De novo dominant mutations in the aldehyde dehydrogenase 18 family member A1 (ALDH18A1) gene have recently been shown to cause autosomal dominant cutis laxa with progeroid features (MIM 616603). To date, all de novo dominant mutations have been found in a single highly conserved amino acid residue at position p.Arg138...

    journal_title:Journal of human genetics

    pub_type: 杂志文章

    doi:10.1038/jhg.2017.18

    authors: Bhola PT,Hartley T,Bareke E,Care4Rare Canada Consortium.,Boycott KM,Nikkel SM,Dyment DA

    更新日期:2017-06-01 00:00:00

  • Recapitulation of genome-wide association studies on pulse pressure and mean arterial pressure in the Korean population.

    abstract::Increased pulse pressure (PP) and decreased mean arterial pressure (MAP) are strong prognostic predictors of adverse cardiovascular events. Recently, the International Consortium for Blood Pressure Genome-Wide Association Studies (ICBP-GWAS) reported eight loci that influenced PP and MAP. The ICBP-GWAS examined 51 coh...

    journal_title:Journal of human genetics

    pub_type: 杂志文章

    doi:10.1038/jhg.2012.31

    authors: Hong KW,Min H,Heo BM,Joo SE,Kim SS,Kim Y

    更新日期:2012-06-01 00:00:00

  • Genetic associations and expression of extra-short isoforms of disrupted-in-schizophrenia 1 in a neurocognitive subgroup of schizophrenia.

    abstract::Disrupted-in-schizophrenia 1 (DISC1) was reported to be associated with schizophrenia. In a previous study, we found significant association with schizophrenia patients with deficient sustained attention assessed by continuous performance test (CPT). This study aimed to identify risk polymorphisms in this specific neu...

    journal_title:Journal of human genetics

    pub_type: 杂志文章

    doi:10.1038/s10038-019-0597-1

    authors: Liu CM,Liu YL,Hwu HG,Fann CS,Yang UC,Hsu PC,Chang CC,Chen WJ,Hwang TJ,Hsieh MH,Liu CC,Chien YL,Lin YT,Tsuang MT

    更新日期:2019-07-01 00:00:00

  • The SCARB1 gene is associated with lipid response to dietary and pharmacological interventions.

    abstract::The scavenger receptor class B type 1 (SCARB1) gene is a key component in the reverse cholesterol transport pathway and thus plays an important role in lipid metabolism. Studies suggest that the SCARB1 gene may contribute to variation in plasma lipid levels at fasting; however, the results have been inconsistent, and ...

    journal_title:Journal of human genetics

    pub_type: 杂志文章

    doi:10.1007/s10038-008-0302-2

    authors: Liu Y,Ordovas JM,Gao G,Province M,Straka RJ,Tsai MY,Lai CQ,Zhang K,Borecki I,Hixson JE,Allison DB,Arnett DK

    更新日期:2008-01-01 00:00:00

  • KOHBRA BRCA risk calculator (KOHCal): a model for predicting BRCA1 and BRCA2 mutations in Korean breast cancer patients.

    abstract::The widely used Western BRCA mutation prediction models underestimated the risk of having a BRCA mutation in Korean breast cancer patients. This study aimed to identify predictive factors for BRCA1/2 mutations and to develop a Korean BRCA risk calculator. The model was constructed by logistic regression model, and it ...

    journal_title:Journal of human genetics

    pub_type: 杂志文章

    doi:10.1038/jhg.2015.164

    authors: Kang E,Park SK,Lee JW,Kim Z,Noh WC,Jung Y,Yang JH,Jung SH,Kim SW

    更新日期:2016-05-01 00:00:00

  • Compound heterozygous PMP22 deletion mutations causing severe Charcot-Marie-Tooth disease type 1.

    abstract::We present a 3⅓-year-old girl with severe Charcot-Marie-Tooth disease type 1 (Dejerine-Sottas disease), who was a compound heterozygote carrying a deletion of the whole peripheral myelin protein 22 (PMP22) and a deletion of exon 5 in the other PMP22 allele. Haplotype analyses and sequence determination revealed a 11.2...

    journal_title:Journal of human genetics

    pub_type: 杂志文章

    doi:10.1038/jhg.2010.106

    authors: Abe A,Nakamura K,Kato M,Numakura C,Honma T,Seiwa C,Shirahata E,Itoh A,Kishikawa Y,Hayasaka K

    更新日期:2010-11-01 00:00:00

  • Human calcitonin receptor-like receptor for adrenomedullin: genomic structure, eight single-nucleotide polymorphisms, and haplotype analysis.

    abstract::Adrenomedullin (ADM), a peptide characterized by persistent hypotensive activity, is thought to be involved when the control mechanism of blood pressure is deranged, because its plasma concentration is upregulated in hypertensive patients. The receptor for ADM, a molecular complex consisting of calcitonin-receptor-lik...

    journal_title:Journal of human genetics

    pub_type: 杂志文章

    doi:10.1007/s100380170100

    authors: Nakazawa I,Nakajima T,Harada H,Ishigami T,Umemura S,Emi M

    更新日期:2001-01-01 00:00:00

  • Retrotransposal integration of mobile genetic elements in human diseases.

    abstract::Approximately one-third of the mammalian genome is composed of highly repeated DNA sequences, of which the two major families, the long and short inter-spersed nucleotide elements (LINEs and SINEs), are represented in humans by L1 and Alu elements respectively. Both 'types of element are considered to be retrotranspos...

    journal_title:Journal of human genetics

    pub_type: 杂志文章,评审

    doi:10.1007/s100380050045

    authors: Miki Y

    更新日期:1998-01-01 00:00:00