Redox balance, metabolic fingerprint and physiological characterization in contrasting North East Indian rice for Aluminum stress tolerance.

Abstract:

:Aluminum (Al) toxicity is a serious problem for rice crop productivity in acidic soils worldwide. The present work was conducted to look out for the alteration in ROS homeostasis; metabolic fingerprint; and morphology in two contrasting Indica rice cultivars of North East India (NE India) to Al toxicity. Al stress led to excess accumulation of ROS (H2O2 and O2-), and this in turn induced ROS mediated cellular damage, as indicated by lipid peroxidation both qualitatively as well as quantitatively. This excessive ROS production also led to significant reduction in chlorophyll content and stomatal conductance. This was followed by the loss of photosynthetic efficiency as detected by chlorophyll fluorescence. This excessive damage due to ROS prompted us to check the anti-oxidative machinery. Antioxidants, especially enzymes (SOD, APX, POX, GR, CAT, DHAR, MDHAR) are very important players in maintenance of ROS homeostasis. In tolerant variety Disang, higher activity of these enzymes and vice versa in sensitive variety, was observed in response to Al treatment. The non-enzymatic antioxidants (proline, ascorbate and glutathione) also showed similar trend. Though the tolerant variety showed strong anti-oxidative machinery, it was unable to completely nullify the stress experienced by the seedlings. Organic acids are also important players in detoxification of Al stress through efflux in the rhizosphere. In tolerant genotype, citrate exudate was found to be more when compared to sensitive genotypes on exposure to high dose of Al. This is supported by higher abundance of FRDL4, a citrate transporter. Not only FRDL4, other stakeholders for Al stress response like ART1 and ALS1 depicted prominent transcript abundance in the tolerant variety. In conclusion, through this study detailed physiological and metabolic characterisation of two contrasting Indica rice varieties Disang and Joymati, native to NE India for Al tolerance was performed for the very first time.

journal_name

Sci Rep

journal_title

Scientific reports

authors

Awasthi JP,Saha B,Panigrahi J,Yanase E,Koyama H,Panda SK

doi

10.1038/s41598-019-45158-3

subject

Has Abstract

pub_date

2019-06-18 00:00:00

pages

8681

issue

1

issn

2045-2322

pii

10.1038/s41598-019-45158-3

journal_volume

9

pub_type

杂志文章
  • Stochastic kinetics reveal imperative role of anisotropic interfacial tension to determine morphology and evolution of nucleated droplets in nematogenic films.

    abstract::For isotropic fluids, classical nucleation theory predicts the nucleation rate, barrier height and critical droplet size by ac- counting for the competition between bulk energy and interfacial tension. The nucleation process in liquid crystals is less understood. We numerically investigate nucleation in monolayered ne...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/srep40059

    authors: Bhattacharjee AK

    更新日期:2017-01-05 00:00:00

  • Live imaging of alterations in cellular morphology and organelles during cornification using an epidermal equivalent model.

    abstract::The stratum corneum plays a crucial role in epidermal barrier function. Various changes occur in granular cells at the uppermost stratum granulosum during cornification. To understand the temporal details of this process, we visualized the cell shape and organelles of cornifying keratinocytes in a living human epiderm...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/s41598-020-62240-3

    authors: Ipponjima S,Umino Y,Nagayama M,Denda M

    更新日期:2020-03-26 00:00:00

  • The DNMT3A R882H mutation does not cause dominant negative effects in purified mixed DNMT3A/R882H complexes.

    abstract::The DNA methyltransferase DNMT3A R882H mutation is observed in 25% of all AML patients. DNMT3A is active as tetramer and the R882H mutation is located in one of the subunit/subunit interfaces. Previous work has reported that formation of mixed wildtype/R882H complexes leads to a strong loss of catalytic activity obser...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/s41598-018-31635-8

    authors: Emperle M,Dukatz M,Kunert S,Holzer K,Rajavelu A,Jurkowska RZ,Jeltsch A

    更新日期:2018-09-05 00:00:00

  • Oncogenic G12D mutation alters local conformations and dynamics of K-Ras.

    abstract::K-Ras is the most frequently mutated oncoprotein in human cancers, and G12D is its most prevalent mutation. To understand how G12D mutation impacts K-Ras function, we need to understand how it alters the regulation of its dynamics. Here, we present local changes in K-Ras structure, conformation and dynamics upon G12D ...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/s41598-019-48029-z

    authors: Vatansever S,Erman B,Gümüş ZH

    更新日期:2019-08-13 00:00:00

  • Compatibility of ciprofloxacin with commercial peritoneal dialysis solutions.

    abstract::Intraperitoneal administration of antibiotics together with peritoneal dialysis fluids (PDFs) remains the preferable route for treatment of peritoneal dialysis-related peritonitis. For home based therapy, antibiotic-containing PDFs are stored for up to two weeks and warmed up to body-temperature before administration....

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/s41598-019-42854-y

    authors: Kussmann M,Ferth A,Obermüller M,Pichler P,Zeitlinger M,Wiesholzer M,Burgmann H,Poeppl W,Reznicek G

    更新日期:2019-04-24 00:00:00

  • Whole-Exome Sequencing of Congenital Glaucoma Patients Reveals Hypermorphic Variants in GPATCH3, a New Gene Involved in Ocular and Craniofacial Development.

    abstract::Congenital glaucoma (CG) is a heterogeneous, inherited and severe optical neuropathy that originates from maldevelopment of the anterior segment of the eye. To identify new disease genes, we performed whole-exome sequencing of 26 unrelated CG patients. In one patient we identified two rare, recessive and hypermorphic ...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/srep46175

    authors: Ferre-Fernández JJ,Aroca-Aguilar JD,Medina-Trillo C,Bonet-Fernández JM,Méndez-Hernández CD,Morales-Fernández L,Corton M,Cabañero-Valera MJ,Gut M,Tonda R,Ayuso C,Coca-Prados M,García-Feijoo J,Escribano J

    更新日期:2017-04-11 00:00:00

  • Identification of Genes Associated with Smad3-dependent Renal Injury by RNA-seq-based Transcriptome Analysis.

    abstract::Transforming growth factor-β/Smad3 signaling plays a critical role in the process of chronic kidney disease (CKD), but targeting Smad3 systematically may cause autoimmune disease by impairing immunity. In this study, we used whole-transcriptome RNA-sequencing to identify the differential gene expression profile, gene ...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/srep17901

    authors: Zhou Q,Xiong Y,Huang XR,Tang P,Yu X,Lan HY

    更新日期:2015-12-09 00:00:00

  • Fast spectrally encoded Mueller optical scanning microscopy.

    abstract::Mueller microscopes enable imaging of the optical anisotropic properties of biological or non-biological samples, in phase and amplitude, at sub-micrometre scale. However, the development of Mueller microscopes poses an instrumental challenge: the production of polarimetric parameters must be sufficiently quick to ens...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/s41598-019-40467-z

    authors: Rivet S,Dubreuil M,Bradu A,Le Grand Y

    更新日期:2019-03-08 00:00:00

  • Stroboscopic vision and sustained attention during coincidence-anticipation.

    abstract::We compared coincidence-anticipation performance in normal vision and stroboscopic vision as a function of time-on-task. Participants estimated the arrival time of a real object that moved with constant acceleration (-0.7, 0, +0.7 m/s2) in a pseudo-randomised order across 4 blocks of 30 trials in both vision condition...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/s41598-017-18092-5

    authors: Ballester R,Huertas F,Uji M,Bennett SJ

    更新日期:2017-12-20 00:00:00

  • Uncovering the sources of DNA found on the Turin Shroud.

    abstract::The Turin Shroud is traditionally considered to be the burial cloth in which the body of Jesus Christ was wrapped after his death approximately 2000 years ago. Here, we report the main findings from the analysis of genomic DNA extracted from dust particles vacuumed from parts of the body image and the lateral edge use...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/srep14484

    authors: Barcaccia G,Galla G,Achilli A,Olivieri A,Torroni A

    更新日期:2015-10-05 00:00:00

  • Sustained accuracy improvement in intraocular lens power calculation with the application of quality control circle.

    abstract::Accurate intraocular lens (IOL) power calculation is always a challenge in ophthalmology, and unoptimized process may lead to inaccurate refractive outcomes. Quality control circle (QCC) has shown its success in many fields as a process management tool. However, its efficacy in ophthalmology remains unclear. Here we u...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/s41598-017-14171-9

    authors: Lin L,Chang P,Xie J,Li Z,Zhang H,Lu F,Zhao YE

    更新日期:2017-11-01 00:00:00

  • Comprehensive analysis of The Cancer Genome Atlas reveals a unique gene and non-coding RNA signature of fibrolamellar carcinoma.

    abstract::Fibrolamellar carcinoma (FLC) is a unique liver cancer primarily affecting young adults and characterized by a fusion event between DNAJB1 and PRKACA. By analyzing RNA-sequencing data from The Cancer Genome Atlas (TCGA) for >9,100 tumors across ~30 cancer types, we show that the DNAJB1-PRKACA fusion is specific to FLC...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/srep44653

    authors: Dinh TA,Vitucci EC,Wauthier E,Graham RP,Pitman WA,Oikawa T,Chen M,Silva GO,Greene KG,Torbenson MS,Reid LM,Sethupathy P

    更新日期:2017-03-17 00:00:00

  • All-optical broadband ultrasonography of single cells.

    abstract::Cell mechanics play a key role in several fundamental biological processes, such as migration, proliferation, differentiation and tissue morphogenesis. In addition, many diseased conditions of the cell are correlated with altered cell mechanics, as in the case of cancer progression. For this there is much interest in ...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/srep08650

    authors: Dehoux T,Abi Ghanem M,Zouani OF,Rampnoux JM,Guillet Y,Dilhaire S,Durrieu MC,Audoin B

    更新日期:2015-03-03 00:00:00

  • Yeast two-hybrid screening for proteins that interact with PFT in wheat.

    abstract::Fusarium head blight (FHB) is a devastating disease of wheat worldwide. Fhb1 is the most consistently reported quantitative trait locus (QTL) for FHB resistance breeding. A pore-forming toxin-like (PFT) gene at Fhb1 was first cloned by map-based cloning and found to confer FHB resistance in wheat. Proteins often inter...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/s41598-019-52030-x

    authors: He Y,Wu L,Liu X,Zhang X,Jiang P,Ma H

    更新日期:2019-10-29 00:00:00

  • Catalytic preparation of levulinic acid from cellobiose via Brønsted-Lewis acidic ionic liquids functional catalysts.

    abstract::Brønsted-Lewis acidic ionic liquids (ILs) were applied to catalyze cellobiose to prepare levulinic acid (LA) in one pot under hydrothermal conditions. Under the optimum conditions, the highest LA yield of 67.51% was obtained when low [HO3S-(CH2)3-mim]Cl-FeCl3 (molar fraction of FeCl3 x = 0.60) was used. This indicated...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/s41598-018-38051-y

    authors: Liu S,Wang K,Yu H,Li B,Yu S

    更新日期:2019-02-12 00:00:00

  • The Microbiome of the Maculinea-Myrmica Host-Parasite Interaction.

    abstract::Maculinea (=Phengaris) are endangered butterflies that are characterized by a very complex biological cycle. Maculinea larvae behave as obligate parasites whose survival is strictly dependent on both particular food plants and species-specific Myrmica ants. In this interaction, Maculinea caterpillars induce Myrmica wo...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/s41598-019-44514-7

    authors: Di Salvo M,Calcagnile M,Talà A,Tredici SM,Maffei ME,Schönrogge K,Barbero F,Alifano P

    更新日期:2019-05-29 00:00:00

  • Nucleoporin insufficiency disrupts a pluripotent regulatory circuit in a pro-arrhythmogenic stem cell line.

    abstract::Nucleoporins have been reported to regulate pluripotent biology, but how they do so remains partially characterized. This study examined the effects of nup155 gene disruption on mouse embryonic stem cells to gain insights into possible mechanisms by which nucleoporins regulate pluripotency in a pro-arrhythmogenic stem...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/s41598-019-49147-4

    authors: Preston CC,Storm EC,Burdine RD,Bradley TA,Uttecht AD,Faustino RS

    更新日期:2019-09-03 00:00:00

  • STING mediates neuronal innate immune response following Japanese encephalitis virus infection.

    abstract::Flavivirus-mediated inflammation causes neuronal death, but whether the infected neurons can evoke an innate immune response to elicit their own protection, is unknown. In an earlier study we have shown that neuronal RIG-I, play a significant role in inducing production and release of molecules that are related to inf...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/srep00347

    authors: Nazmi A,Mukhopadhyay R,Dutta K,Basu A

    更新日期:2012-01-01 00:00:00

  • The Safety Limits Of An Extended Fast: Lessons from a Non-Model Organism.

    abstract::While safety of fasting therapy is debated in humans, extended fasting occurs routinely and safely in wild animals. To do so, food deprived animals like breeding penguins anticipate the critical limit of fasting by resuming feeding. To date, however, no molecular indices of the physiological state that links spontaneo...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/srep39008

    authors: Bertile F,Fouillen L,Wasselin T,Maes P,Le Maho Y,Van Dorsselaer A,Raclot T

    更新日期:2016-12-19 00:00:00

  • Identification of isoliquiritigenin as an activator that stimulates the enzymatic production of glycyrrhetinic acid monoglucuronide.

    abstract::Glycyrrhetinic acid monoglucuronide (GAMG) is a great value-added and has considerable commercial interest due to its strong pharmacological activities and functional low-calorie sweetener. However GAMG is quite rare in natural plants, and it must be prepared from glycyrrhizin (GL) by hydrolysing one terminal glucuron...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/s41598-017-10154-y

    authors: Wang X,Wang D,Huo Y,Dai D,Li C,Li C,Liu G

    更新日期:2017-10-02 00:00:00

  • A novel, rapid method to compare the therapeutic windows of oral anticoagulants using the Hill coefficient.

    abstract::A central challenge in designing and administering effective anticoagulants is achieving the proper therapeutic window and dosage for each patient. The Hill coefficient, nH, which measures the steepness of a dose-response relationship, may be a useful gauge of this therapeutic window. We sought to measure the Hill coe...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/srep29387

    authors: Chang JB,Quinnies KM,Realubit R,Karan C,Rand JH,Tatonetti NP

    更新日期:2016-07-21 00:00:00

  • Author Correction: Neural control of fasting-induced torpor in mice.

    abstract::An amendment to this paper has been published and can be accessed via a link at the top of the paper. ...

    journal_title:Scientific reports

    pub_type: 已发布勘误

    doi:10.1038/s41598-020-61223-8

    authors: Hitrec T,Luppi M,Bastianini S,Squarcio F,Berteotti C,Lo Martire V,Martelli D,Occhinegro A,Tupone D,Zoccoli G,Amici R,Cerri M

    更新日期:2020-03-03 00:00:00

  • Transcriptomic analysis of crustacean molting gland (Y-organ) regulation via the mTOR signaling pathway.

    abstract::The intermolt crustacean Y-organ (YO) maintains a basal state mediated by pulsatile release of molt inhibiting hormone (MIH), a neuropeptide produced in the eyestalk ganglia, inhibiting YO ecdysteroidogenesis. Reduction of MIH results in YO activation and the animal enters premolt. In the crab, Gecarcinus lateralis, m...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/s41598-018-25368-x

    authors: Shyamal S,Das S,Guruacharya A,Mykles DL,Durica DS

    更新日期:2018-05-09 00:00:00

  • People Can Create Iconic Vocalizations to Communicate Various Meanings to Naïve Listeners.

    abstract::The innovation of iconic gestures is essential to establishing the vocabularies of signed languages, but might iconicity also play a role in the origin of spoken words? Can people create novel vocalizations that are comprehensible to naïve listeners without prior convention? We launched a contest in which participants...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/s41598-018-20961-6

    authors: Perlman M,Lupyan G

    更新日期:2018-02-08 00:00:00

  • Inkjet-Printed Graphene/PEDOT:PSS Temperature Sensors on a Skin-Conformable Polyurethane Substrate.

    abstract::Epidermal electronic systems (EESs) are skin-like electronic systems, which can be used to measure several physiological parameters from the skin. This paper presents materials and a simple, straightforward fabrication process for skin-conformable inkjet-printed temperature sensors. Epidermal temperature sensors are a...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/srep35289

    authors: Vuorinen T,Niittynen J,Kankkunen T,Kraft TM,Mäntysalo M

    更新日期:2016-10-18 00:00:00

  • Differentially expressed microRNAs between cattleyak and yak testis.

    abstract::Cattleyak are interspecific hybrids between cattle and yak, exhibiting the same prominent adaptability as yak and much higher performances than yak. However, male infertility of cattleyak resulted from spermatogenic arrest has greatly restricted their effective utilization in yak breeding. In past decades, much work h...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/s41598-017-18607-0

    authors: Xu C,Wu S,Zhao W,Mipam T,Liu J,Liu W,Yi C,Shah MA,Yu S,Cai X

    更新日期:2018-01-12 00:00:00

  • Cancer cells grown in 3D under fluid flow exhibit an aggressive phenotype and reduced responsiveness to the anti-cancer treatment doxorubicin.

    abstract::3D laboratory models of cancer are designed to recapitulate the biochemical and biophysical characteristics of the tumour microenvironment and aim to enable studies of cancer, and new therapeutic modalities, in a physiologically-relevant manner. We have developed an in vitro 3D model comprising a central high-density ...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/s41598-020-68999-9

    authors: Azimi T,Loizidou M,Dwek MV

    更新日期:2020-07-21 00:00:00

  • Solitonic Josephson-based meminductive systems.

    abstract::Memristors, memcapacitors, and meminductors represent an innovative generation of circuit elements whose properties depend on the state and history of the system. The hysteretic behavior of one of their constituent variables, is their distinctive fingerprint. This feature endows them with the ability to store and proc...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/srep46736

    authors: Guarcello C,Solinas P,Di Ventra M,Giazotto F

    更新日期:2017-04-24 00:00:00

  • Diagnostic accuracy of contrast enhanced ultrasound in patients with blunt abdominal trauma presenting to the emergency department: a systematic review and meta-analysis.

    abstract::We aimed to investigate the diagnostic accuracy of contrast-enhanced ultrasound (CEUS) in evaluating blunt abdominal trauma for patients presenting to the emergency department. Electronic search of Scopus and Pubmed was performed from inception to September 2016. Human studies investigating the diagnostic accuracy of ...

    journal_title:Scientific reports

    pub_type: 杂志文章,meta分析

    doi:10.1038/s41598-017-04779-2

    authors: Zhang Z,Hong Y,Liu N,Chen Y

    更新日期:2017-06-30 00:00:00

  • High glucose alters tendon homeostasis through downregulation of the AMPK/Egr1 pathway.

    abstract::Diabetes mellitus (DM) is associated with higher risk of tendinopathy, which reduces tolerance to exercise and functional activities and affects lifestyle and glycemic control. Expression of tendon-related genes and matrix metabolism in tenocytes are essential for maintaining physiological functions of tendon. However...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/srep44199

    authors: Wu YF,Wang HK,Chang HW,Sun J,Sun JS,Chao YH

    更新日期:2017-03-07 00:00:00