Illuminating spatial A-to-I RNA editing signatures within the Drosophila brain.

Abstract:

:Adenosine-to-inosine (A-to-I) RNA editing, catalyzed by ADAR enzymes, is a ubiquitous mechanism that generates transcriptomic diversity. This process is particularly important for proper neuronal function; however, little is known about how RNA editing is dynamically regulated between the many functionally distinct neuronal populations of the brain. Here, we present a spatial RNA editing map in the Drosophila brain and show that different neuronal populations possess distinct RNA editing signatures. After purifying and sequencing RNA from genetically marked groups of neuronal nuclei, we identified a large number of editing sites and compared editing levels in hundreds of transcripts across nine functionally different neuronal populations. We found distinct editing repertoires for each population, including sites in repeat regions of the transcriptome and differential editing in highly conserved and likely functional regions of transcripts that encode essential neuronal genes. These changes are site-specific and not driven by changes in Adar expression, suggesting a complex, targeted regulation of editing levels in key transcripts. This fine-tuning of the transcriptome between different neurons by RNA editing may account for functional differences between distinct populations in the brain.

authors

Sapiro AL,Shmueli A,Henry GL,Li Q,Shalit T,Yaron O,Paas Y,Billy Li J,Shohat-Ophir G

doi

10.1073/pnas.1811768116

subject

Has Abstract

pub_date

2019-02-05 00:00:00

pages

2318-2327

issue

6

eissn

0027-8424

issn

1091-6490

pii

1811768116

journal_volume

116

pub_type

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