FBXL19 recruits CDK-Mediator to CpG islands of developmental genes priming them for activation during lineage commitment.

Abstract:

:CpG islands are gene regulatory elements associated with the majority of mammalian promoters, yet how they regulate gene expression remains poorly understood. Here, we identify FBXL19 as a CpG island-binding protein in mouse embryonic stem (ES) cells and show that it associates with the CDK-Mediator complex. We discover that FBXL19 recruits CDK-Mediator to CpG island-associated promoters of non-transcribed developmental genes to prime these genes for activation during cell lineage commitment. We further show that recognition of CpG islands by FBXL19 is essential for mouse development. Together this reveals a new CpG island-centric mechanism for CDK-Mediator recruitment to developmental gene promoters in ES cells and a requirement for CDK-Mediator in priming these developmental genes for activation during cell lineage commitment.

journal_name

Elife

journal_title

eLife

authors

Dimitrova E,Kondo T,Feldmann A,Nakayama M,Koseki Y,Konietzny R,Kessler BM,Koseki H,Klose RJ

doi

10.7554/eLife.37084

subject

Has Abstract

pub_date

2018-05-29 00:00:00

issn

2050-084X

pii

37084

journal_volume

7

pub_type

杂志文章

相关文献

eLife文献大全
  • Exchange of water for sterol underlies sterol egress from a StARkin domain.

    abstract::Previously we identified Lam/GramD1 proteins, a family of endoplasmic reticulum membrane proteins with sterol-binding StARkin domains that are implicated in intracellular sterol homeostasis. Here, we show how these proteins exchange sterol molecules with membranes. An aperture at one end of the StARkin domain enables ...

    journal_title:eLife

    pub_type: 杂志文章

    doi:10.7554/eLife.53444

    authors: Khelashvili G,Chauhan N,Pandey K,Eliezer D,Menon AK

    更新日期:2019-12-04 00:00:00

  • Response to short-term deprivation of the human adult visual cortex measured with 7T BOLD.

    abstract::Sensory deprivation during the post-natal 'critical period' leads to structural reorganization of the developing visual cortex. In adulthood, the visual cortex retains some flexibility and adapts to sensory deprivation. Here we show that short-term (2 hr) monocular deprivation in adult humans boosts the BOLD response ...

    journal_title:eLife

    pub_type: 杂志文章

    doi:10.7554/eLife.40014

    authors: Binda P,Kurzawski JW,Lunghi C,Biagi L,Tosetti M,Morrone MC

    更新日期:2018-11-26 00:00:00

  • Coordinated hedgehog signaling induces new hair follicles in adult skin.

    abstract::Hair follicle (HF) development is orchestrated by coordinated signals from adjacent epithelial and mesenchymal cells. In humans this process only occurs during embryogenesis and viable strategies to induce new HFs in adult skin are lacking. Here, we reveal that activation of Hedgehog (Hh) signaling in adjacent epithel...

    journal_title:eLife

    pub_type: 杂志文章

    doi:10.7554/eLife.46756

    authors: Sun X,Are A,Annusver K,Sivan U,Jacob T,Dalessandri T,Joost S,Füllgrabe A,Gerling M,Kasper M

    更新日期:2020-03-17 00:00:00

  • Sleep deprivation causes memory deficits by negatively impacting neuronal connectivity in hippocampal area CA1.

    abstract::Brief periods of sleep loss have long-lasting consequences such as impaired memory consolidation. Structural changes in synaptic connectivity have been proposed as a substrate of memory storage. Here, we examine the impact of brief periods of sleep deprivation on dendritic structure. In mice, we find that five hours o...

    journal_title:eLife

    pub_type: 杂志文章

    doi:10.7554/eLife.13424

    authors: Havekes R,Park AJ,Tudor JC,Luczak VG,Hansen RT,Ferri SL,Bruinenberg VM,Poplawski SG,Day JP,Aton SJ,Radwańska K,Meerlo P,Houslay MD,Baillie GS,Abel T

    更新日期:2016-08-23 00:00:00

  • The cerebellum shows its stripes.

    abstract::New studies examine how the different sub-structures in the cerebellum are organized to receive information during complex behavioral tasks. ...

    journal_title:eLife

    pub_type: 评论,杂志文章

    doi:10.7554/eLife.52631

    authors: Holloway AL,Lerner TN

    更新日期:2019-11-14 00:00:00

  • Community-level cohesion without cooperation.

    abstract::Recent work draws attention to community-community encounters ('coalescence') as likely an important factor shaping natural ecosystems. This work builds on MacArthur's classic model of competitive coexistence to investigate such community-level competition in a minimal theoretical setting. It is shown that the ability...

    journal_title:eLife

    pub_type: 杂志文章

    doi:10.7554/eLife.15747

    authors: Tikhonov M

    更新日期:2016-06-16 00:00:00

  • Impaired voice processing in reward and salience circuits predicts social communication in children with autism.

    abstract::Engaging with vocal sounds is critical for children's social-emotional learning, and children with autism spectrum disorder (ASD) often 'tune out' voices in their environment. Little is known regarding the neurobiological basis of voice processing and its link to social impairments in ASD. Here, we perform the first c...

    journal_title:eLife

    pub_type: 杂志文章

    doi:10.7554/eLife.39906

    authors: Abrams DA,Padmanabhan A,Chen T,Odriozola P,Baker AE,Kochalka J,Phillips JM,Menon V

    更新日期:2019-02-26 00:00:00

  • Importin-9 wraps around the H2A-H2B core to act as nuclear importer and histone chaperone.

    abstract::We report the crystal structure of nuclear import receptor Importin-9 bound to its cargo, the histones H2A-H2B. Importin-9 wraps around the core, globular region of H2A-H2B to form an extensive interface. The nature of this interface coupled with quantitative analysis of deletion mutants of H2A-H2B suggests that the N...

    journal_title:eLife

    pub_type: 杂志文章

    doi:10.7554/eLife.43630

    authors: Padavannil A,Sarkar P,Kim SJ,Cagatay T,Jiou J,Brautigam CA,Tomchick DR,Sali A,D'Arcy S,Chook YM

    更新日期:2019-03-11 00:00:00

  • Shared behavioral mechanisms underlie C. elegans aggregation and swarming.

    abstract::In complex biological systems, simple individual-level behavioral rules can give rise to emergent group-level behavior. While collective behavior has been well studied in cells and larger organisms, the mesoscopic scale is less understood, as it is unclear which sensory inputs and physical processes matter a priori. H...

    journal_title:eLife

    pub_type: 杂志文章

    doi:10.7554/eLife.43318

    authors: Ding SS,Schumacher LJ,Javer AE,Endres RG,Brown AE

    更新日期:2019-04-25 00:00:00

  • GnT1IP-L specifically inhibits MGAT1 in the Golgi via its luminal domain.

    abstract::Mouse GnT1IP-L, and membrane-bound GnT1IP-S (MGAT4D) expressed in cultured cells inhibit MGAT1, the N-acetylglucosaminyltransferase that initiates the synthesis of hybrid and complex N-glycans. However, it is not known where in the secretory pathway GnT1IP-L inhibits MGAT1, nor whether GnT1IP-L inhibits other N-glycan...

    journal_title:eLife

    pub_type: 杂志文章

    doi:10.7554/eLife.08916

    authors: Huang HH,Hassinen A,Sundaram S,Spiess AN,Kellokumpu S,Stanley P

    更新日期:2015-09-15 00:00:00

  • LynA regulates an inflammation-sensitive signaling checkpoint in macrophages.

    abstract::Clustering of receptors associated with immunoreceptor tyrosine-based activation motifs (ITAMs) initiates the macrophage antimicrobial response. ITAM receptors engage Src-family tyrosine kinases (SFKs) to initiate phagocytosis and macrophage activation. Macrophages also encounter nonpathogenic molecules that cluster r...

    journal_title:eLife

    pub_type: 杂志文章

    doi:10.7554/eLife.09183

    authors: Freedman TS,Tan YX,Skrzypczynska KM,Manz BN,Sjaastad FV,Goodridge HS,Lowell CA,Weiss A

    更新日期:2015-10-30 00:00:00

  • Addressing selective reporting of experiments through predefined exclusion criteria.

    abstract::The pressure for every research article to tell a clear story often leads researchers in the life sciences to exclude experiments that 'did not work' when they write up their results. However, this practice can lead to reporting bias if the decisions about which experiments to exclude are taken after data have been co...

    journal_title:eLife

    pub_type: 杂志文章

    doi:10.7554/eLife.56626

    authors: Neves K,Amaral OB

    更新日期:2020-05-22 00:00:00

  • A mitochondria-anchored isoform of the actin-nucleating spire protein regulates mitochondrial division.

    abstract::Mitochondrial division, essential for survival in mammals, is enhanced by an inter-organellar process involving ER tubules encircling and constricting mitochondria. The force for constriction is thought to involve actin polymerization by the ER-anchored isoform of the formin protein inverted formin 2 (INF2). Unknown i...

    journal_title:eLife

    pub_type: 杂志文章

    doi:10.7554/eLife.08828

    authors: Manor U,Bartholomew S,Golani G,Christenson E,Kozlov M,Higgs H,Spudich J,Lippincott-Schwartz J

    更新日期:2015-08-25 00:00:00

  • Maternal cortisol is associated with neonatal amygdala microstructure and connectivity in a sexually dimorphic manner.

    abstract::The mechanisms linking maternal stress in pregnancy with infant neurodevelopment in a sexually dimorphic manner are poorly understood. We tested the hypothesis that maternal hypothalamic-pituitary-adrenal axis activity, measured by hair cortisol concentration (HCC), is associated with microstructure, structural connec...

    journal_title:eLife

    pub_type: 杂志文章

    doi:10.7554/eLife.60729

    authors: Stoye DQ,Blesa M,Sullivan G,Galdi P,Lamb GJ,Black GS,Quigley AJ,Thrippleton MJ,Bastin ME,Reynolds RM,Boardman JP

    更新日期:2020-11-24 00:00:00

  • tRNA synthetase counteracts c-Myc to develop functional vasculature.

    abstract::Recent studies suggested an essential role for seryl-tRNA synthetase (SerRS) in vascular development. This role is specific to SerRS among all tRNA synthetases and is independent of its well-known aminoacylation function in protein synthesis. A unique nucleus-directing domain, added at the invertebrate-to-vertebrate t...

    journal_title:eLife

    pub_type: 杂志文章

    doi:10.7554/eLife.02349

    authors: Shi Y,Xu X,Zhang Q,Fu G,Mo Z,Wang GS,Kishi S,Yang XL

    更新日期:2014-06-17 00:00:00

  • Cell non-autonomous regulation of health and longevity.

    abstract::As the demographics of the modern world skew older, understanding and mitigating the effects of aging is increasingly important within biomedical research. Recent studies in model organisms demonstrate that the aging process is frequently modified by an organism's ability to perceive and respond to changes in its envi...

    journal_title:eLife

    pub_type: 杂志文章

    doi:10.7554/eLife.62659

    authors: Miller HA,Dean ES,Pletcher SD,Leiser SF

    更新日期:2020-12-10 00:00:00

  • Metformin inhibits mitochondrial complex I of cancer cells to reduce tumorigenesis.

    abstract::Recent epidemiological and laboratory-based studies suggest that the anti-diabetic drug metformin prevents cancer progression. How metformin diminishes tumor growth is not fully understood. In this study, we report that in human cancer cells, metformin inhibits mitochondrial complex I (NADH dehydrogenase) activity and...

    journal_title:eLife

    pub_type: 杂志文章

    doi:10.7554/eLife.02242

    authors: Wheaton WW,Weinberg SE,Hamanaka RB,Soberanes S,Sullivan LB,Anso E,Glasauer A,Dufour E,Mutlu GM,Budigner GS,Chandel NS

    更新日期:2014-05-13 00:00:00

  • Forebrain deletion of the dystonia protein torsinA causes dystonic-like movements and loss of striatal cholinergic neurons.

    abstract::Striatal dysfunction plays an important role in dystonia, but the striatal cell types that contribute to abnormal movements are poorly defined. We demonstrate that conditional deletion of the DYT1 dystonia protein torsinA in embryonic progenitors of forebrain cholinergic and GABAergic neurons causes dystonic-like twis...

    journal_title:eLife

    pub_type: 杂志文章

    doi:10.7554/eLife.08352

    authors: Pappas SS,Darr K,Holley SM,Cepeda C,Mabrouk OS,Wong JM,LeWitt TM,Paudel R,Houlden H,Kennedy RT,Levine MS,Dauer WT

    更新日期:2015-06-08 00:00:00

  • The yellow gene influences Drosophila male mating success through sex comb melanization.

    abstract::Drosophila melanogaster males perform a series of courtship behaviors that, when successful, result in copulation with a female. For over a century, mutations in the yellow gene, named for its effects on pigmentation, have been known to reduce male mating success. Prior work has suggested that yellow influences mating...

    journal_title:eLife

    pub_type: 杂志文章

    doi:10.7554/eLife.49388

    authors: Massey JH,Chung D,Siwanowicz I,Stern DL,Wittkopp PJ

    更新日期:2019-10-15 00:00:00

  • CSF1R blockade induces macrophage ablation and results in mouse choroidal vascular atrophy and RPE disorganization.

    abstract::The choroid, which provides vascular supply to the outer retina, demonstrates progressive degeneration in aging and age-related macular degeneration (AMD). However mechanisms that maintain or compromise choroidal homeostasis are obscure. We discovered that the ablation of choroidal macrophages via CSF1R blockade was a...

    journal_title:eLife

    pub_type: 杂志文章

    doi:10.7554/eLife.55564

    authors: Yang X,Zhao L,Campos MM,Abu-Asab M,Ortolan D,Hotaling N,Bharti K,Wong WT

    更新日期:2020-04-01 00:00:00

  • Characterization of human translesion DNA synthesis across a UV-induced DNA lesion.

    abstract::Translesion DNA synthesis (TLS) during S-phase uses specialized TLS DNA polymerases to replicate a DNA lesion, allowing stringent DNA synthesis to resume beyond the offending damage. Human TLS involves the conjugation of ubiquitin to PCNA clamps encircling damaged DNA and the role of this post-translational modificati...

    journal_title:eLife

    pub_type: 杂志文章

    doi:10.7554/eLife.19788

    authors: Hedglin M,Pandey B,Benkovic SJ

    更新日期:2016-10-22 00:00:00

  • Ser/Thr kinase Trc controls neurite outgrowth in Drosophila by modulating microtubule-microtubule sliding.

    abstract::Correct neuronal development requires tailored neurite outgrowth. Neurite outgrowth is driven in part by microtubule-sliding - the transport of microtubules along each other. We have recently demonstrated that a 'mitotic' kinesin-6 (Pavarotti in Drosophila) effectively inhibits microtubule-sliding and neurite outgrowt...

    journal_title:eLife

    pub_type: 杂志文章

    doi:10.7554/eLife.52009

    authors: Norkett R,Del Castillo U,Lu W,Gelfand VI

    更新日期:2020-02-05 00:00:00

  • Development, calibration, and validation of a novel human ventricular myocyte model in health, disease, and drug block.

    abstract::Human-based modelling and simulations are becoming ubiquitous in biomedical science due to their ability to augment experimental and clinical investigations. Cardiac electrophysiology is one of the most advanced areas, with cardiac modelling and simulation being considered for virtual testing of pharmacological therap...

    journal_title:eLife

    pub_type: 杂志文章

    doi:10.7554/eLife.48890

    authors: Tomek J,Bueno-Orovio A,Passini E,Zhou X,Minchole A,Britton O,Bartolucci C,Severi S,Shrier A,Virag L,Varro A,Rodriguez B

    更新日期:2019-12-24 00:00:00

  • Nanoresolution real-time 3D orbital tracking for studying mitochondrial trafficking in vertebrate axons in vivo.

    abstract::We present the development and in vivo application of a feedback-based tracking microscope to follow individual mitochondria in sensory neurons of zebrafish larvae with nanometer precision and millisecond temporal resolution. By combining various technical improvements, we tracked individual mitochondria with unpreced...

    journal_title:eLife

    pub_type: 杂志文章

    doi:10.7554/eLife.46059

    authors: Wehnekamp F,Plucińska G,Thong R,Misgeld T,Lamb DC

    更新日期:2019-06-10 00:00:00

  • Adaptive coding for dynamic sensory inference.

    abstract::Behavior relies on the ability of sensory systems to infer properties of the environment from incoming stimuli. The accuracy of inference depends on the fidelity with which behaviorally relevant properties of stimuli are encoded in neural responses. High-fidelity encodings can be metabolically costly, but low-fidelity...

    journal_title:eLife

    pub_type: 杂志文章

    doi:10.7554/eLife.32055

    authors: Młynarski WF,Hermundstad AM

    更新日期:2018-07-10 00:00:00

  • The angiopoietin-like protein ANGPTL4 catalyzes unfolding of the hydrolase domain in lipoprotein lipase and the endothelial membrane protein GPIHBP1 counteracts this unfolding.

    abstract::Lipoprotein lipase (LPL) undergoes spontaneous inactivation via global unfolding and this unfolding is prevented by GPIHBP1 (Mysling et al., 2016). We now show: (1) that ANGPTL4 inactivates LPL by catalyzing the unfolding of its hydrolase domain; (2) that binding to GPIHBP1 renders LPL largely refractory to this inhib...

    journal_title:eLife

    pub_type: 杂志文章

    doi:10.7554/eLife.20958

    authors: Mysling S,Kristensen KK,Larsson M,Kovrov O,Bensadouen A,Jørgensen TJ,Olivecrona G,Young SG,Ploug M

    更新日期:2016-12-08 00:00:00

  • A postsynaptic PI3K-cII dependent signaling controller for presynaptic homeostatic plasticity.

    abstract::Presynaptic homeostatic plasticity stabilizes information transfer at synaptic connections in organisms ranging from insect to human. By analogy with principles of engineering and control theory, the molecular implementation of PHP is thought to require postsynaptic signaling modules that encode homeostatic sensors, a...

    journal_title:eLife

    pub_type: 杂志文章

    doi:10.7554/eLife.31535

    authors: Hauswirth AG,Ford KJ,Wang T,Fetter RD,Tong A,Davis GW

    更新日期:2018-01-05 00:00:00

  • Variable opportunities for outcrossing result in hotspots of novel genetic variation in a pathogen metapopulation.

    abstract::Many pathogens possess the capacity for sex through outcrossing, despite being able to reproduce also asexually and/or via selfing. Given that sex is assumed to come at a cost, these mixed reproductive strategies typical of pathogens have remained puzzling. While the ecological and evolutionary benefits of outcrossing...

    journal_title:eLife

    pub_type: 杂志文章

    doi:10.7554/eLife.47091

    authors: Laine AL,Barrès B,Numminen E,Siren JP

    更新日期:2019-06-18 00:00:00

  • Direct live imaging of cell-cell protein transfer by transient outer membrane fusion in Myxococcus xanthus.

    abstract::In bacteria, multicellular behaviors are regulated by cell-cell signaling through the exchange of both diffusible and contact-dependent signals. In a multicellular context, Myxococcus cells can share outer membrane (OM) materials by an unknown mechanism involving the traAB genes and gliding motility. Using live imagin...

    journal_title:eLife

    pub_type: 杂志文章

    doi:10.7554/eLife.00868

    authors: Ducret A,Fleuchot B,Bergam P,Mignot T

    更新日期:2013-07-23 00:00:00

  • Fly model sheds light on brain disease.

    abstract::Experiments on flies suggest that a gain-of-function mechanism in a protein called CSPɑ contributes to the progressive brain disease CLN4. ...

    journal_title:eLife

    pub_type: 评论,杂志文章

    doi:10.7554/eLife.53233

    authors: Berryer MH,Kosmaczewski SG,Barrett LE

    更新日期:2019-12-06 00:00:00