Synaptic input sequence discrimination on behavioral timescales mediated by reaction-diffusion chemistry in dendrites.

Abstract:

:Sequences of events are ubiquitous in sensory, motor, and cognitive function. Key computational operations, including pattern recognition, event prediction, and plasticity, involve neural discrimination of spatio-temporal sequences. Here, we show that synaptically-driven reaction-diffusion pathways on dendrites can perform sequence discrimination on behaviorally relevant time-scales. We used abstract signaling models to show that selectivity arises when inputs at successive locations are aligned with, and amplified by, propagating chemical waves triggered by previous inputs. We incorporated biological detail using sequential synaptic input onto spines in morphologically, electrically, and chemically detailed pyramidal neuronal models based on rat data. Again, sequences were recognized, and local channel modulation downstream of putative sequence-triggered signaling could elicit changes in neuronal firing. We predict that dendritic sequence-recognition zones occupy 5 to 30 microns and recognize time-intervals of 0.2 to 5 s. We suggest that this mechanism provides highly parallel and selective neural computation in a functionally important time range.

journal_name

Elife

journal_title

eLife

authors

Bhalla US

doi

10.7554/eLife.25827

subject

Has Abstract

pub_date

2017-04-19 00:00:00

issn

2050-084X

journal_volume

6

pub_type

杂志文章

相关文献

eLife文献大全
  • Respiratory syncytial virus co-opts host mitochondrial function to favour infectious virus production.

    abstract::Although respiratory syncytial virus (RSV) is responsible for more human deaths each year than influenza, its pathogenic mechanisms are poorly understood. Here high-resolution quantitative imaging, bioenergetics measurements and mitochondrial membrane potential- and redox-sensitive dyes are used to define RSV's impact...

    journal_title:eLife

    pub_type: 杂志文章

    doi:10.7554/eLife.42448

    authors: Hu M,Schulze KE,Ghildyal R,Henstridge DC,Kolanowski JL,New EJ,Hong Y,Hsu AC,Hansbro PM,Wark PA,Bogoyevitch MA,Jans DA

    更新日期:2019-06-27 00:00:00

  • Identification of an inhibitory neuron subtype, the L-stellate cell of the cochlear nucleus.

    abstract::Auditory processing depends upon inhibitory signaling by interneurons, even at its earliest stages in the ventral cochlear nucleus (VCN). Remarkably, to date only a single subtype of inhibitory neuron has been documented in the VCN, a projection neuron termed the D-stellate cell. With the use of a transgenic mouse lin...

    journal_title:eLife

    pub_type: 杂志文章

    doi:10.7554/eLife.54350

    authors: Ngodup T,Romero GE,Trussell LO

    更新日期:2020-11-03 00:00:00

  • Control of entropy in neural models of environmental state.

    abstract::Humans and animals construct internal models of their environment in order to select appropriate courses of action. The representation of uncertainty about the current state of the environment is a key feature of these models that controls the rate of learning as well as directly affecting choice behaviour. To maintai...

    journal_title:eLife

    pub_type: 杂志文章

    doi:10.7554/eLife.39404

    authors: Muller TH,Mars RB,Behrens TE,O'Reilly JX

    更新日期:2019-02-28 00:00:00

  • The contribution of temporal coding to odor coding and odor perception in humans.

    abstract::Whether neurons encode information through their spike rates, their activity times or both is an ongoing debate in systems neuroscience. Here, we tested whether humans can discriminate between a pair of temporal odor mixtures (TOMs) composed of the same two components delivered in rapid succession in either one tempor...

    journal_title:eLife

    pub_type: 杂志文章

    doi:10.7554/eLife.49734

    authors: Perl O,Nahum N,Belelovsky K,Haddad R

    更新日期:2020-02-07 00:00:00

  • Population scale mapping of transposable element diversity reveals links to gene regulation and epigenomic variation.

    abstract::Variation in the presence or absence of transposable elements (TEs) is a major source of genetic variation between individuals. Here, we identified 23,095 TE presence/absence variants between 216 Arabidopsis accessions. Most TE variants were rare, and we find these rare variants associated with local extremes of gene ...

    journal_title:eLife

    pub_type: 杂志文章

    doi:10.7554/eLife.20777

    authors: Stuart T,Eichten SR,Cahn J,Karpievitch YV,Borevitz JO,Lister R

    更新日期:2016-12-02 00:00:00

  • Distinct ipRGC subpopulations mediate light's acute and circadian effects on body temperature and sleep.

    abstract::The light environment greatly impacts human alertness, mood, and cognition by both acute regulation of physiology and indirect alignment of circadian rhythms. These processes require the melanopsin-expressing intrinsically photosensitive retinal ganglion cells (ipRGCs), but the relevant downstream brain areas involved...

    journal_title:eLife

    pub_type: 杂志文章

    doi:10.7554/eLife.44358

    authors: Rupp AC,Ren M,Altimus CM,Fernandez DC,Richardson M,Turek F,Hattar S,Schmidt TM

    更新日期:2019-07-23 00:00:00

  • Mucosal absorption of therapeutic peptides by harnessing the endogenous sorting of glycosphingolipids.

    abstract::Transport of biologically active molecules across tight epithelial barriers is a major challenge preventing therapeutic peptides from oral drug delivery. Here, we identify a set of synthetic glycosphingolipids that harness the endogenous process of intracellular lipid-sorting to enable mucosal absorption of the incret...

    journal_title:eLife

    pub_type: 杂志文章

    doi:10.7554/eLife.34469

    authors: Garcia-Castillo MD,Chinnapen DJ,Te Welscher YM,Gonzalez RJ,Softic S,Pacheco M,Mrsny RJ,Kahn CR,von Andrian UH,Lau J,Pentelute BL,Lencer WI

    更新日期:2018-05-31 00:00:00

  • Pervasive transcription read-through promotes aberrant expression of oncogenes and RNA chimeras in renal carcinoma.

    abstract::Aberrant expression of cancer genes and non-canonical RNA species is a hallmark of cancer. However, the mechanisms driving such atypical gene expression programs are incompletely understood. Here, our transcriptional profiling of a cohort of 50 primary clear cell renal cell carcinoma (ccRCC) samples from The Cancer Ge...

    journal_title:eLife

    pub_type: 杂志文章

    doi:10.7554/eLife.09214

    authors: Grosso AR,Leite AP,Carvalho S,Matos MR,Martins FB,Vítor AC,Desterro JM,Carmo-Fonseca M,de Almeida SF

    更新日期:2015-11-17 00:00:00

  • Developmental mechanism of the periodic membrane skeleton in axons.

    abstract::Actin, spectrin, and associated molecules form a periodic sub-membrane lattice structure in axons. How this membrane skeleton is developed and why it preferentially forms in axons are unknown. Here, we studied the developmental mechanism of this lattice structure. We found that this structure emerged early during axon...

    journal_title:eLife

    pub_type: 杂志文章

    doi:10.7554/eLife.04581

    authors: Zhong G,He J,Zhou R,Lorenzo D,Babcock HP,Bennett V,Zhuang X

    更新日期:2014-12-23 00:00:00

  • Recurrent loss of CenH3 is associated with independent transitions to holocentricity in insects.

    abstract::Faithful chromosome segregation in all eukaryotes relies on centromeres, the chromosomal sites that recruit kinetochore proteins and mediate spindle attachment during cell division. The centromeric histone H3 variant, CenH3, is the defining chromatin component of centromeres in most eukaryotes, including animals, fung...

    journal_title:eLife

    pub_type: 杂志文章

    doi:10.7554/eLife.03676

    authors: Drinnenberg IA,deYoung D,Henikoff S,Malik HS

    更新日期:2014-09-23 00:00:00

  • A fitness trade-off between seasons causes multigenerational cycles in phenotype and population size.

    abstract::Although seasonality is widespread and can cause fluctuations in the intensity and direction of natural selection, we have little information about the consequences of seasonal fitness trade-offs for population dynamics. Here we exposed populations of Drosophila melanogaster to repeated seasonal changes in resources a...

    journal_title:eLife

    pub_type: 杂志文章

    doi:10.7554/eLife.18770

    authors: Betini GS,McAdam AG,Griswold CK,Norris DR

    更新日期:2017-02-06 00:00:00

  • Regulation of food intake by mechanosensory ion channels in enteric neurons.

    abstract::Regulation of food intake is fundamental to energy homeostasis in animals. The contribution of non-nutritive and metabolic signals in regulating feeding is unclear. Here we show that enteric neurons play a major role in regulating feeding through specialized mechanosensory ion channels in Drosophila. Modulating activi...

    journal_title:eLife

    pub_type: 杂志文章

    doi:10.7554/eLife.04402

    authors: Olds WH,Xu T

    更新日期:2014-10-06 00:00:00

  • Tuning site-specific dynamics to drive allosteric activation in a pneumococcal zinc uptake regulator.

    abstract::MarR (multiple antibiotic resistance repressor) family proteins are bacterial repressors that regulate transcription in response to a wide range of chemical signals. Although specific features of MarR family function have been described, the role of atomic motions in MarRs remains unexplored thus limiting insights int...

    journal_title:eLife

    pub_type: 杂志文章

    doi:10.7554/eLife.37268

    authors: Capdevila DA,Huerta F,Edmonds KA,Le MT,Wu H,Giedroc DP

    更新日期:2018-10-17 00:00:00

  • The laminar organization of the Drosophila ellipsoid body is semaphorin-dependent and prevents the formation of ectopic synaptic connections.

    abstract::The ellipsoid body (EB) in the Drosophila brain is a central complex (CX) substructure that harbors circumferentially laminated ring (R) neuron axons and mediates multifaceted sensory integration and motor coordination functions. However, what regulates R axon lamination and how lamination affects R neuron function re...

    journal_title:eLife

    pub_type: 杂志文章

    doi:10.7554/eLife.25328

    authors: Xie X,Tabuchi M,Brown MP,Mitchell SP,Wu MN,Kolodkin AL

    更新日期:2017-06-20 00:00:00

  • Global clues to the nature of genomic mutations in humans.

    abstract::An analysis of worldwide human genetic variation reveals the footprints of ancient changes in genomic mutation processes. ...

    journal_title:eLife

    pub_type: 评论,杂志文章

    doi:10.7554/eLife.27605

    authors: Scally A

    更新日期:2017-05-17 00:00:00

  • The autophagy gene Atg16l1 differentially regulates Treg and TH2 cells to control intestinal inflammation.

    abstract::A polymorphism in the autophagy gene Atg16l1 is associated with susceptibility to inflammatory bowel disease (IBD); however, it remains unclear how autophagy contributes to intestinal immune homeostasis. Here, we demonstrate that autophagy is essential for maintenance of balanced CD4(+) T cell responses in the intesti...

    journal_title:eLife

    pub_type: 杂志文章

    doi:10.7554/eLife.12444

    authors: Kabat AM,Harrison OJ,Riffelmacher T,Moghaddam AE,Pearson CF,Laing A,Abeler-Dörner L,Forman SP,Grencis RK,Sattentau Q,Simon AK,Pott J,Maloy KJ

    更新日期:2016-02-24 00:00:00

  • Human motor fatigability as evoked by repetitive movements results from a gradual breakdown of surround inhibition.

    abstract::Motor fatigability emerges when demanding tasks are executed over an extended period of time. Here, we used repetitive low-force movements that cause a gradual reduction in movement speed (or 'motor slowing') to study the central component of fatigability in healthy adults. We show that motor slowing is associated wit...

    journal_title:eLife

    pub_type: 杂志文章

    doi:10.7554/eLife.46750

    authors: Bächinger M,Lehner R,Thomas F,Hanimann S,Balsters J,Wenderoth N

    更新日期:2019-09-16 00:00:00

  • Patched1 and Patched2 inhibit Smoothened non-cell autonomously.

    abstract::Smoothened (Smo) inhibition by Patched (Ptch) is central to Hedgehog (Hh) signaling. Ptch, a proton driven antiporter, is required for Smo inhibition via an unknown mechanism. Hh ligand binding to Ptch reverses this inhibition and activated Smo initiates the Hh response. To determine whether Ptch inhibits Smo strictly...

    journal_title:eLife

    pub_type: 杂志文章

    doi:10.7554/eLife.17634

    authors: Roberts B,Casillas C,Alfaro AC,Jägers C,Roelink H

    更新日期:2016-08-23 00:00:00

  • Host proteostasis modulates influenza evolution.

    abstract::Predicting and constraining RNA virus evolution require understanding the molecular factors that define the mutational landscape accessible to these pathogens. RNA viruses typically have high mutation rates, resulting in frequent production of protein variants with compromised biophysical properties. Their evolution i...

    journal_title:eLife

    pub_type: 杂志文章

    doi:10.7554/eLife.28652

    authors: Phillips AM,Gonzalez LO,Nekongo EE,Ponomarenko AI,McHugh SM,Butty VL,Levine SS,Lin YS,Mirny LA,Shoulders MD

    更新日期:2017-09-26 00:00:00

  • Cell-cycle-gated feedback control mediates desensitization to interferon stimulation.

    abstract::Cells use molecular circuits to interpret and respond to extracellular cues, such as hormones and cytokines, which are often released in a temporally varying fashion. In this study, we combine microfluidics, time-lapse microscopy, and computational modeling to investigate how the type I interferon (IFN)-responsive reg...

    journal_title:eLife

    pub_type: 杂志文章

    doi:10.7554/eLife.58825

    authors: Mudla A,Jiang Y,Arimoto KI,Xu B,Rajesh A,Ryan AP,Wang W,Daugherty MD,Zhang DE,Hao N

    更新日期:2020-09-18 00:00:00

  • Building for the future.

    abstract::As the staff of the MRC Laboratory of Molecular Biology settle into their new building in Cambridge, its director Hugh Pelham explains the challenges of living up to its prestigious past. ...

    journal_title:eLife

    pub_type: 杂志文章

    doi:10.7554/eLife.00856

    authors: Pelham H

    更新日期:2013-05-28 00:00:00

  • Structure-based characterization of novel TRPV5 inhibitors.

    abstract::Transient receptor potential vanilloid 5 (TRPV5) is a highly calcium selective ion channel that acts as the rate-limiting step of calcium reabsorption in the kidney. The lack of potent, specific modulators of TRPV5 has limited the ability to probe the contribution of TRPV5 in disease phenotypes such as hypercalcemia a...

    journal_title:eLife

    pub_type: 杂志文章

    doi:10.7554/eLife.49572

    authors: Hughes TE,Del Rosario JS,Kapoor A,Yazici AT,Yudin Y,Fluck EC 3rd,Filizola M,Rohacs T,Moiseenkova-Bell VY

    更新日期:2019-10-25 00:00:00

  • Amygdala neural activity reflects spatial attention towards stimuli promising reward or threatening punishment.

    abstract::Humans and other animals routinely identify and attend to sensory stimuli so as to rapidly acquire rewards or avoid aversive experiences. Emotional arousal, a process mediated by the amygdala, can enhance attention to stimuli in a non-spatial manner. However, amygdala neural activity was recently shown to encode spati...

    journal_title:eLife

    pub_type: 杂志文章

    doi:10.7554/eLife.04478

    authors: Peck CJ,Salzman CD

    更新日期:2014-10-30 00:00:00

  • Rheotaxis facilitates upstream navigation of mammalian sperm cells.

    abstract::A major puzzle in biology is how mammalian sperm maintain the correct swimming direction during various phases of the sexual reproduction process. Whilst chemotaxis may dominate near the ovum, it is unclear which cues guide spermatozoa on their long journey towards the egg. Hypothesized mechanisms range from peristalt...

    journal_title:eLife

    pub_type: 杂志文章

    doi:10.7554/eLife.02403

    authors: Kantsler V,Dunkel J,Blayney M,Goldstein RE

    更新日期:2014-05-27 00:00:00

  • Addressing selective reporting of experiments through predefined exclusion criteria.

    abstract::The pressure for every research article to tell a clear story often leads researchers in the life sciences to exclude experiments that 'did not work' when they write up their results. However, this practice can lead to reporting bias if the decisions about which experiments to exclude are taken after data have been co...

    journal_title:eLife

    pub_type: 杂志文章

    doi:10.7554/eLife.56626

    authors: Neves K,Amaral OB

    更新日期:2020-05-22 00:00:00

  • Novel genetic loci affecting facial shape variation in humans.

    abstract::The human face represents a combined set of highly heritable phenotypes, but knowledge on its genetic architecture remains limited, despite the relevance for various fields. A series of genome-wide association studies on 78 facial shape phenotypes quantified from 3-dimensional facial images of 10,115 Europeans identif...

    journal_title:eLife

    pub_type: 杂志文章,meta分析

    doi:10.7554/eLife.49898

    authors: Xiong Z,Dankova G,Howe LJ,Lee MK,Hysi PG,de Jong MA,Zhu G,Adhikari K,Li D,Li Y,Pan B,Feingold E,Marazita ML,Shaffer JR,McAloney K,Xu SH,Jin L,Wang S,de Vrij FM,Lendemeijer B,Richmond S,Zhurov A,Lewis S,Sharp

    更新日期:2019-11-26 00:00:00

  • GPIHBP1 expression in gliomas promotes utilization of lipoprotein-derived nutrients.

    abstract::GPIHBP1, a GPI-anchored protein of capillary endothelial cells, binds lipoprotein lipase (LPL) within the subendothelial spaces and shuttles it to the capillary lumen. GPIHBP1-bound LPL is essential for the margination of triglyceride-rich lipoproteins (TRLs) along capillaries, allowing the lipolytic processing of TRL...

    journal_title:eLife

    pub_type: 杂志文章

    doi:10.7554/eLife.47178

    authors: Hu X,Matsumoto K,Jung RS,Weston TA,Heizer PJ,He C,Sandoval NP,Allan CM,Tu Y,Vinters HV,Liau LM,Ellison RM,Morales JE,Baufeld LJ,Bayley NA,He L,Betsholtz C,Beigneux AP,Nathanson DA,Gerhardt H,Young SG,Fong LG,J

    更新日期:2019-06-06 00:00:00

  • Attentional amplification of neural codes for number independent of other quantities along the dorsal visual stream.

    abstract::Humans and other animals base important decisions on estimates of number, and intraparietal cortex is thought to provide a crucial substrate of this ability. However, it remains debated whether an independent neuronal processing mechanism underlies this 'number sense', or whether number is instead judged indirectly on...

    journal_title:eLife

    pub_type: 杂志文章

    doi:10.7554/eLife.45160

    authors: Castaldi E,Piazza M,Dehaene S,Vignaud A,Eger E

    更新日期:2019-07-24 00:00:00

  • Dissecting cell-type-specific metabolism in pancreatic ductal adenocarcinoma.

    abstract::Tumors are composed of many different cell types including cancer cells, fibroblasts, and immune cells. Dissecting functional metabolic differences between cell types within a mixed population can be challenging due to the rapid turnover of metabolites relative to the time needed to isolate cells. To overcome this cha...

    journal_title:eLife

    pub_type: 杂志文章

    doi:10.7554/eLife.56782

    authors: Lau AN,Li Z,Danai LV,Westermark AM,Darnell AM,Ferreira R,Gocheva V,Sivanand S,Lien EC,Sapp KM,Mayers JR,Biffi G,Chin CR,Davidson SM,Tuveson DA,Jacks T,Matheson NJ,Yilmaz O,Vander Heiden MG

    更新日期:2020-07-10 00:00:00

  • Hidden synaptic differences in a neural circuit underlie differential behavioral susceptibility to a neural injury.

    abstract::Individuals vary in their responses to stroke and trauma, hampering predictions of outcomes. One reason might be that neural circuits contain hidden variability that becomes relevant only when those individuals are challenged by injury. We found that in the mollusc, Tritonia diomedea, subtle differences between animal...

    journal_title:eLife

    pub_type: 杂志文章

    doi:10.7554/eLife.02598

    authors: Sakurai A,Tamvacakis AN,Katz PS

    更新日期:2014-06-11 00:00:00