Temporal patterns and geographic heterogeneity of Zika virus (ZIKV) outbreaks in French Polynesia and Central America.

Abstract:

BACKGROUND:Zika virus (ZIKV) transmission has been reported in 67 countries/territories in the Oceania region and the Americas since 2015, prompting the World Health Organization (WHO) to declare ZIKV as a Public Health Emergency of International Concern in February 2016, due to its strong association with medical complications such as microcephaly and Guillain-Barré Syndrome (GBS). However, a substantial gap in knowledge still exists regarding differing temporal pattern and potential of transmission of ZIKV in different regions of the world. METHODS:We use a phenomenological model to ascertain the temporal patterns and transmission potential of ZIKV in various countries/territories, by fitting the model to Zika case data from Yap Island and French Polynesia in the Oceania region and 11 countries/territories with confirmed case data, namely, Colombia, Ecuador, French Guiana, Guadeloupe, Guatemala, Mexico, Nicaragua, Panama, Puerto Rico, Saint Martin, and Suriname, to pinpoint the waves of infections in each country/territory and to estimate the respective basic reproduction number R0. RESULTS:Six of these time series datasets resulted in statistically significant model fit of at least one wave of reported cases, namely that of French Polynesia, Colombia, Puerto Rico, Guatemala, Suriname and Saint Martin. However, only Colombia and Guatemala exhibited two waves of cases while the others had only one wave. Temporal patterns of the second wave in Colombia and the single wave in Suriname are very similar, with the respective turning points separated by merely a week. Moreover, the mean estimates of R0 for Colombia, Guatemala and Suriname, all land-based populations, range between 1.05 and 1.75, while the corresponding mean estimates for R0 of island populations in French Polynesia, Puerto Rico and Saint Martin are significantly lower with a range of 5.70-6.89. We also fit the Richards model to Zika case data from six main archipelagos in French Polynesia, suggesting the outbreak in all six island populations occurred during the same time, albeit with different peak time, with mean R0 range of 3.09-5.05. DISCUSSION:Using the same modeling methodology, in this study we found a significant difference between transmissibility (as quantified by R0) in island populations as opposed to land-based countries/territories, possibly suggesting an important role of geographic heterogeneity in the spread of vector-borne diseases and its future course, which requires further monitoring. Our result has potential implications for planning respective intervention and control policies targeted for island and land-based populations.

journal_name

PeerJ

journal_title

PeerJ

authors

Hsieh YH

doi

10.7717/peerj.3015

subject

Has Abstract

pub_date

2017-03-21 00:00:00

pages

e3015

issn

2167-8359

pii

3015

journal_volume

5

pub_type

杂志文章

相关文献

PeerJ文献大全
  • Living upside down: patterns of red coral settlement in a cave.

    abstract:Background:Larval settlement and intra-specific interactions during the recruitment phase are crucial in determining the distribution and density of sessile marine populations. Marine caves are confined and stable habitats. As such, they provide a natural laboratory to study the settlement and recruitment processes in ...

    journal_title:PeerJ

    pub_type: 杂志文章

    doi:10.7717/peerj.4649

    authors: Costantini F,Rugiu L,Cerrano C,Abbiati M

    更新日期:2018-05-21 00:00:00

  • Quantile-dependent expressivity of plasma adiponectin concentrations may explain its sex-specific heritability, gene-environment interactions, and genotype-specific response to postprandial lipemia.

    abstract:Background:"Quantile-dependent expressivity" occurs when the effect size of a genetic variant depends upon whether the phenotype (e.g. adiponectin) is high or low relative to its distribution. We have previously shown that the heritability (h2 ) of adiposity, lipoproteins, postprandial lipemia, pulmonary function, and ...

    journal_title:PeerJ

    pub_type: 杂志文章

    doi:10.7717/peerj.10099

    authors: Williams PT

    更新日期:2020-10-14 00:00:00

  • Coral larvae for restoration and research: a large-scale method for rearing Acropora millepora larvae, inducing settlement, and establishing symbiosis.

    abstract::Here we describe an efficient and effective technique for rearing sexually-derived coral propagules from spawning through larval settlement and symbiont uptake with minimal impact on natural coral populations. We sought to maximize larval survival while minimizing expense and daily husbandry maintenance by experimenta...

    journal_title:PeerJ

    pub_type: 杂志文章

    doi:10.7717/peerj.3732

    authors: Pollock FJ,Katz SM,van de Water JAJM,Davies SW,Hein M,Torda G,Matz MV,Beltran VH,Buerger P,Puill-Stephan E,Abrego D,Bourne DG,Willis BL

    更新日期:2017-09-06 00:00:00

  • Genomic analysis of P elements in natural populations of Drosophila melanogaster.

    abstract::The Drosophila melanogaster P transposable element provides one of the best cases of horizontal transfer of a mobile DNA sequence in eukaryotes. Invasion of natural populations by the P element has led to a syndrome of phenotypes known as P-M hybrid dysgenesis that emerges when strains differing in their P element com...

    journal_title:PeerJ

    pub_type: 杂志文章

    doi:10.7717/peerj.3824

    authors: Bergman CM,Han S,Nelson MG,Bondarenko V,Kozeretska I

    更新日期:2017-09-15 00:00:00

  • High diversity and suggested endemicity of culturable Actinobacteria in an extremely oligotrophic desert oasis.

    abstract::The phylum Actinobacteria constitutes one of the largest and anciently divergent phyla within the Bacteria domain. Actinobacterial diversity has been thoroughly researched in various environments due to its unique biotechnological potential. Such studies have focused mostly on soil communities, but more recently marin...

    journal_title:PeerJ

    pub_type: 杂志文章

    doi:10.7717/peerj.3247

    authors: Arocha-Garza HF,Canales-Del Castillo R,Eguiarte LE,Souza V,De la Torre-Zavala S

    更新日期:2017-05-02 00:00:00

  • motoRneuron: an open-source R toolbox for time-domain motor unit analyses.

    abstract::Motor unit synchronization is the tendency of motor neurons and their associated muscle fibers to discharge near-simultaneously. It has been theorized as a control mechanism for force generation by common excitatory inputs to these motor neurons. Magnitude of synchronization is calculated from peaks in cross-correlati...

    journal_title:PeerJ

    pub_type: 杂志文章

    doi:10.7717/peerj.7907

    authors: Tweedell AJ,Tenan MS

    更新日期:2019-12-10 00:00:00

  • Data concordance between ESRD Medical Evidence Report and Medicare claims: is there any improvement?

    abstract:Background:Medicare is one of the world's largest health insurance programs. It provides health insurance to nearly 44 million beneficiaries whose entitlements are based on age, disability, or end-stage renal disease (ESRD). Data of these ESRD beneficiaries are collected in the US Renal Data System (USRDS), which inclu...

    journal_title:PeerJ

    pub_type: 杂志文章

    doi:10.7717/peerj.5284

    authors: Mu Y,Chin AI,Kshirsagar AV,Bang H

    更新日期:2018-07-27 00:00:00

  • Dissociating predictability, plausibility and possibility of sentence continuations in reading: evidence from late-positivity ERPs.

    abstract::Late positive event-related potential (ERP) components occurring after the N400, traditionally linked to reanalysis due to syntactic incongruence, are increasingly considered to also reflect reanalysis and repair due to semantic difficulty. Semantic problems can have different origins, such as a mismatch of specific p...

    journal_title:PeerJ

    pub_type: 杂志文章

    doi:10.7717/peerj.5717

    authors: Quante L,Bölte J,Zwitserlood P

    更新日期:2018-10-12 00:00:00

  • Climate envelope predictions indicate an enlarged suitable wintering distribution for Great Bustards (Otis tarda dybowskii) in China for the 21st century.

    abstract::The rapidly changing climate makes humans realize that there is a critical need to incorporate climate change adaptation into conservation planning. Whether the wintering habitats of Great Bustards (Otis tarda dybowskii), a globally endangered migratory subspecies whose population is approximately 1,500-2,200 individu...

    journal_title:PeerJ

    pub_type: 杂志文章

    doi:10.7717/peerj.1630

    authors: Mi C,Falk H,Guo Y

    更新日期:2016-02-01 00:00:00

  • Multiphasic strain differentiation of atypical mycobacteria from elephant trunk wash.

    abstract::Background. Two non-tuberculous mycobacterial strains, UM_3 and UM_11, were isolated from the trunk wash of captive elephants in Malaysia. As they appeared to be identical phenotypes, they were investigated further by conventional and whole genome sequence-based methods of strain differentiation. Methods. Multiphasic ...

    journal_title:PeerJ

    pub_type: 杂志文章

    doi:10.7717/peerj.1367

    authors: Chan KG,Loke MF,Ong BL,Wong YL,Hong KW,Tan KH,Kaur S,Ng HF,Abdul Razak M,Ngeow YF

    更新日期:2015-11-10 00:00:00

  • Long-term continuously monocropped peanut significantly changed the abundance and composition of soil bacterial communities.

    abstract::Soil sickness is the progressive loss of soil quality due to continuous monocropping. The bacterial populations are critical to sustaining agroecosystems, but their responses to long-term peanut monocropping have not been determined. In this study, based on a previously constructed gradient of continuous monocropped p...

    journal_title:PeerJ

    pub_type: 杂志文章

    doi:10.7717/peerj.9024

    authors: Chen M,Liu H,Yu S,Wang M,Pan L,Chen N,Wang T,Chi X,Du B

    更新日期:2020-04-28 00:00:00

  • Associations of moderate-to-vigorous physical activity with psychological problems and suicidality in Chinese high school students: a cross-sectional study.

    abstract:Background:The body of literature regarding the associations between physical activity and psychological problems lacks consensus. Moreover, the role of gender has been scarcely investigated. The present study sought to fill the gap in the data by examining the associations, if any, between moderate-to-vigorous physica...

    journal_title:PeerJ

    pub_type: 杂志文章

    doi:10.7717/peerj.8775

    authors: Liu M,Zhang J,Kamper-DeMarco KE,Hu E,Yao S

    更新日期:2020-03-25 00:00:00

  • Effect of radiotherapy on the gut microbiome in pediatric cancer patients: a pilot study.

    abstract::The incidence of pediatric cancer is lower than that of adult cancer worldwide. However, the former has detrimental side effects on the health of individuals, even after the cancer is cured, due to the impact of treatment on development. Recently, correlations have been made between the gut microbiome and cancer in se...

    journal_title:PeerJ

    pub_type: 杂志文章

    doi:10.7717/peerj.7683

    authors: Sahly N,Moustafa A,Zaghloul M,Salem TZ

    更新日期:2019-09-23 00:00:00

  • Bite force data suggests relationship between acrodont tooth implantation and strong bite force.

    abstract::Extant and extinct reptiles exhibit numerous combinations of tooth implantation and attachment. Tooth implantation ranges from those possessing roots and lying within a socket (thecodonty), to teeth lying against the lingual wall of the jawbone (pleurodonty), to teeth without roots or sockets that are attached to the ...

    journal_title:PeerJ

    pub_type: 杂志文章

    doi:10.7717/peerj.9468

    authors: Jenkins KM,Shaw JO

    更新日期:2020-06-30 00:00:00

  • Maternal inheritance of F1 hybrid morphology and colony shape in the coral genus Acropora.

    abstract:Background:The coral genus Acropora contains more than 150 species with very high morphological diversity. This high diversity may have been caused by repeated hybridization via mass spawning. However, we have little information whether hybrids are formed in these corals. Identifying morphological differences between h...

    journal_title:PeerJ

    pub_type: 杂志文章

    doi:10.7717/peerj.6429

    authors: Fukami H,Iwao K,Kumagai NH,Morita M,Isomura N

    更新日期:2019-02-19 00:00:00

  • Analysis of prognostic genes in the tumor microenvironment of lung adenocarcinoma.

    abstract:Background:Prognostic genes in the tumor microenvironment play an important role in immune biological processes and the response of cancer to immunotherapy. Thus, we aimed to assess new biomarkers that are associated with immune/stromal cells in lung adenocarcinomas (LUAD) using the ESTIMATE algorithm, which also signi...

    journal_title:PeerJ

    pub_type: 杂志文章

    doi:10.7717/peerj.9530

    authors: Xu ZY,Zhao M,Chen W,Li K,Qin F,Xiang WW,Sun Y,Wei J,Yuan LQ,Li SK,Lin SH

    更新日期:2020-07-23 00:00:00

  • Tandem-repeat protein domains across the tree of life.

    abstract::Tandem-repeat protein domains, composed of repeated units of conserved stretches of 20-40 amino acids, are required for a wide array of biological functions. Despite their diverse and fundamental functions, there has been no comprehensive assessment of their taxonomic distribution, incidence, and associations with org...

    journal_title:PeerJ

    pub_type: 杂志文章

    doi:10.7717/peerj.732

    authors: Jernigan KK,Bordenstein SR

    更新日期:2015-01-13 00:00:00

  • Association between genetic polymorphisms of the IL28B gene and leukomonocyte in Chinese hepatitis B virus-infected individuals.

    abstract:Background:Hepatitis B infection is one of the most severe hepatic diseases in China. Thus, understanding the genetic pathogenesis of hepatitis B virus (HBV)-infected individuals is important. Although no consistent result is obtained in different populations, HBV treatment effect is reportedly associated with the IL28...

    journal_title:PeerJ

    pub_type: 杂志文章

    doi:10.7717/peerj.4149

    authors: Song Y,Shen Y,Xia X,Zhang AM

    更新日期:2017-12-19 00:00:00

  • A new p-terphenyl derivative from the insect-derived fungus Aspergillus candidus Bdf-2 and the synergistic effects of terphenyllin.

    abstract::A new p-terphenyl derivative 4″-deoxy-2'-methoxyterphenyllin (1), along with six known p-terphenyl derivatives (2-7), a known flavonoid derivative dechlorochlorflavonin (8) and a known fellutanine A (9), were isolated from the insect-derived strain of the fungus Aspergillus candidus Bdf-2, associated with Blaptica dub...

    journal_title:PeerJ

    pub_type: 杂志文章

    doi:10.7717/peerj.8221

    authors: Shan T,Wang Y,Wang S,Xie Y,Cui Z,Wu C,Sun J,Wang J,Mao Z

    更新日期:2020-01-02 00:00:00

  • Use of aerial thermography to reduce mortality of roe deer fawns before harvest.

    abstract::In agricultural landscape, there are thousands of young wild animals killed every year. Their deaths are caused mostly by agricultural fieldworks during spring harvest. Among the affected animals there are also fawns of roe deer (Capreolus capreolus), which react to danger by pressing themselves against the ground in ...

    journal_title:PeerJ

    pub_type: 杂志文章

    doi:10.7717/peerj.6923

    authors: Cukor J,Bartoška J,Rohla J,Sova J,Machálek A

    更新日期:2019-05-10 00:00:00

  • Physiological and behavioral responses of house sparrows to repeated stressors.

    abstract::Despite decades of research, we still lack a complete understanding of what factors influence the transition of the necessary and adaptive acute stress response to what has become known as chronic stress. This gap in knowledge has illuminated the necessity for studies that examine the thresholds between these two side...

    journal_title:PeerJ

    pub_type: 杂志文章

    doi:10.7717/peerj.4961

    authors: Gormally BMG,Wright-Lichter J,Reed JM,Romero LM

    更新日期:2018-06-06 00:00:00

  • Comparison of miRNA expression profiles in pituitary-adrenal axis between Beagle and Chinese Field dogs after chronic stress exposure.

    abstract::MicoRNAs (miRNAs), usually as gene regulators, participate in various biological processes, including stress responses. The hypothalamus-pituitary-adrenal axis (HPA axis) is an important pathway in regulating stress response. Although the mechanism that HPA axis regulates stress response has been basically revealed, t...

    journal_title:PeerJ

    pub_type: 杂志文章

    doi:10.7717/peerj.1682

    authors: Luo W,Fang M,Xu H,Xing H,Fu J,Nie Q

    更新日期:2016-02-18 00:00:00

  • Variance component testing for identifying differentially expressed genes in RNA-seq data.

    abstract::RNA sequencing (RNA-Seq) enables the measurement and comparison of gene expression with isoform-level quantification. Differences in the effect of each isoform may make traditional methods, which aggregate isoforms, ineffective. Here, we introduce a variance component-based test that can jointly test multiple isoforms...

    journal_title:PeerJ

    pub_type: 杂志文章

    doi:10.7717/peerj.3797

    authors: Yang S,Shao F,Duan W,Zhao Y,Chen F

    更新日期:2017-09-08 00:00:00

  • Virus discovery in all three major lineages of terrestrial arthropods highlights the diversity of single-stranded DNA viruses associated with invertebrates.

    abstract::Viruses encoding a replication-associated protein (Rep) within a covalently closed, single-stranded (ss)DNA genome are among the smallest viruses known to infect eukaryotic organisms, including economically valuable agricultural crops and livestock. Although circular Rep-encoding ssDNA (CRESS DNA) viruses are a widesp...

    journal_title:PeerJ

    pub_type: 杂志文章

    doi:10.7717/peerj.5761

    authors: Rosario K,Mettel KA,Benner BE,Johnson R,Scott C,Yusseff-Vanegas SZ,Baker CCM,Cassill DL,Storer C,Varsani A,Breitbart M

    更新日期:2018-10-11 00:00:00

  • Nest-site selection, reproductive ecology and shifts within core-use areas of Black-necked Cranes at the northern limit of the Tibetan Plateau.

    abstract::We investigated population dynamics, breeding pairs, breeding habitat selection, nest density, distance between neighboring nests, nest survival, reproductive success, and recruitment rate for Black-necked Cranes (BNC, Grus nigricollis) during 2013-2015 in Yanchiwan National Nature Reserve (YCW), Gansu, China. Numbers...

    journal_title:PeerJ

    pub_type: 杂志文章

    doi:10.7717/peerj.2939

    authors: Zhang L,An B,Shu M,Yang X

    更新日期:2017-01-31 00:00:00

  • Expansion of sandhill cranes (Grus canadensis) in east Asia during the non-breeding period.

    abstract:Aim:Historically, the distribution of Sandhill Cranes included much of North America and extending in summer into northeast Russia. In recent years, observations of sandhill cranes in Asia during the non-breeding period have been frequently reported. However, the distribution and abundance of sandhill cranes during the...

    journal_title:PeerJ

    pub_type: 杂志文章

    doi:10.7717/peerj.7545

    authors: Gao L,Mi C,Guo Y

    更新日期:2019-08-30 00:00:00

  • Continental variation in wing pigmentation in Calopteryx damselflies is related to the presence of heterospecifics.

    abstract::Wing pigmentation in Calopteryx damselflies, caused by the deposition of melanin, is energetically expensive to produce and enhances predation risk. However, patterns of melanisation are used in species identification, greater pigmentation is an accurate signal of male immune function in at least some species, and the...

    journal_title:PeerJ

    pub_type: 杂志文章

    doi:10.7717/peerj.438

    authors: Hassall C

    更新日期:2014-06-10 00:00:00

  • Phylogenomic analysis of the Chilean clade of Liolaemus lizards (Squamata: Liolaemidae) based on sequence capture data.

    abstract::The genus Liolaemus is one of the most ecologically diverse and species-rich genera of lizards worldwide. It currently includes more than 250 recognized species, which have been subject to many ecological and evolutionary studies. Nevertheless, Liolaemus lizards have a complex taxonomic history, mainly due to the inco...

    journal_title:PeerJ

    pub_type: 杂志文章

    doi:10.7717/peerj.3941

    authors: Panzera A,Leaché AD,D'Elía G,Victoriano PF

    更新日期:2017-10-26 00:00:00

  • Global mapping of potential natural vegetation: an assessment of machine learning algorithms for estimating land potential.

    abstract::Potential natural vegetation (PNV) is the vegetation cover in equilibrium with climate, that would exist at a given location if not impacted by human activities. PNV is useful for raising public awareness about land degradation and for estimating land potential. This paper presents results of assessing machine learnin...

    journal_title:PeerJ

    pub_type: 杂志文章

    doi:10.7717/peerj.5457

    authors: Hengl T,Walsh MG,Sanderman J,Wheeler I,Harrison SP,Prentice IC

    更新日期:2018-08-22 00:00:00

  • Looking upstream: enhancers of child nutritional status in post-flood rural settings.

    abstract::Background. Child undernutrition and flooding are highly prevalent public health issues in many developing countries, yet we have little understanding of preventive strategies for effective coping in these circumstances. Education has been recently highlighted as key to reduce the societal impacts of extreme weather e...

    journal_title:PeerJ

    pub_type: 杂志文章

    doi:10.7717/peerj.1741

    authors: Rodriguez-Llanes JM,Ranjan-Dash S,Mukhopadhyay A,Guha-Sapir D

    更新日期:2016-03-01 00:00:00