Extracellular Proteome Profiling of Bacillus pumilus SCU11 Producing Alkaline Protease for Dehairing.

Abstract:

:Bacillus pumilus is one of the most characterized microorganisms that are used for high-level production of select industrial enzymes. A novel B. pumilus SCU11 strain possessing high alkaline protease activity was obtained in our previous work. The culture supernatant of this strain showed efficient dehairing capability with minimal collagen damage, indicating promising potential applications in the leather industry. In this study, the strain's extracellular proteome was identified by LC-MS/MS-based shotgun proteomic analysis, and their related secretory pathways were characterized by BLAST searches. A total of 513 proteins, including 100 actual secreted and 413 intracellular proteins, were detected in the extracellular proteome. The functions of these secreted proteins were elucidated and four complete secretory systems (Sec, Tat, Com, and ABC transporter) were proposed for B. pumilus. These data provide B. pumilus a comprehensive extracellular proteome profile, which is a valuable theoretical and applicative basis for future genetic modifications and development of industrial enzymes.

journal_name

J Microbiol Biotechnol

authors

Wang C,Yu S,Song T,He T,Shao H,Wang H

doi

10.4014/jmb.1602.02042

subject

Has Abstract

pub_date

2016-11-28 00:00:00

pages

1993-2005

issue

11

eissn

1017-7825

issn

1738-8872

pii

10.4014/jmb.1602.02042

journal_volume

26

pub_type

杂志文章
  • Microbial Community Composition in the Marine Sediments of Jeju Island: Next-Generation Sequencing Surveys.

    abstract::Marine sediments are a microbial biosphere with an unknown physiology, and the sediments harbor numerous distinct phylogenetic lineages of Bacteria and Archaea that are at present uncultured. In this study, the structure of the archaeal and bacterial communities was investigated in the surface and subsurface sediments...

    journal_title:Journal of microbiology and biotechnology

    pub_type: 杂志文章

    doi:10.4014/jmb.1512.12036

    authors: Choi H,Koh HW,Kim H,Chae JC,Park SJ

    更新日期:2016-05-28 00:00:00

  • Enhancement of L-lactic acid production in Lactobacillus casei from Jerusalem artichoke tubers by kinetic optimization and citrate metabolism.

    abstract::Efficient L-lactic acid production from Jerusalem artichoke tubers by Lactobacillus casei G-02 using simultaneous saccharification and fermentation (SSF) in fed-batch culture is demonstrated. The kinetic analysis in the SSF signified that the inulinase activity was subjected to product inhibition, while the fermentati...

    journal_title:Journal of microbiology and biotechnology

    pub_type: 杂志文章

    doi:

    authors: Ge XY,Qian H,Zhang WG

    更新日期:2010-01-01 00:00:00

  • Classification of Bacillus beneficial substances related to plants, humans and animals.

    abstract::Genus Bacillus is a spore-forming bacterium that has unique properties in cell differentiation, allowing the forming of spores in stress conditions and activated in the vegetative cell, with suitable environments occurring during the life cycle acting as a trigger. Their habitat is mainly in soil; thus, many species o...

    journal_title:Journal of microbiology and biotechnology

    pub_type: 杂志文章,评审

    doi:10.4014/jmb.1204.04013

    authors: Mongkolthanaruk W

    更新日期:2012-12-01 00:00:00

  • Higher biomass productivity of microalgae in an attached growth system, using wastewater.

    abstract::Although most algae cultivation systems are operated in suspended culture, an attached growth system can offer several advantages over suspended systems. Algal cultivation becomes light-limited as the microalgal concentration increases in the suspended system; on the other hand, sunlight penetrates deeper and stronger...

    journal_title:Journal of microbiology and biotechnology

    pub_type: 杂志文章

    doi:10.4014/jmb.1406.06057

    authors: Lee SH,Oh HM,Jo BH,Lee SA,Shin SY,Kim HS,Lee SH,Ahn CY

    更新日期:2014-11-28 00:00:00

  • Mitotic cohesin subunit Mcd1 regulates the progression of meiotic recombination in budding yeast.

    abstract::The cohesin complex holds sister chromatids together and prevents premature chromosome segregation until the onset of anaphase. Mcd1 (also known as Scc1), the α-kleisin subunit of cohesin, is a key regulatory subunit of the mitotic cohesin complex and is required for maintaining sister chromatid cohesion, chromosome o...

    journal_title:Journal of microbiology and biotechnology

    pub_type: 杂志文章

    doi:10.4014/jmb.1501.01081

    authors: Lee MS,Yoon SW,Kim KP

    更新日期:2015-05-01 00:00:00

  • Antagonistic potentiality of Trichoderma harzianum towards seed-borne fungal pathogens of winter wheat cv. Protiva in vitro and in vivo.

    abstract::The antagonistic effect of Trichoderma harzianum on a range of seed-borne fungal pathogens of wheat (viz. Fusarium graminearum, Bipolaris sorokiniana, Aspergillus spp., and Penicillium spp.) was assessed. The potential of T. harzianum as a biocontrol agent was tested in vitro and under field conditions. Coculture of t...

    journal_title:Journal of microbiology and biotechnology

    pub_type: 杂志文章

    doi:10.4014/jmb.1107.07063

    authors: Hasan MM,Rahman SM,Kim GH,Abdallah E,Oh DH

    更新日期:2012-05-01 00:00:00

  • Selective gene transfer to hepatocellular carcinoma using homing peptide-grafted cationic liposomes.

    abstract::Gene delivery that provides targeted delivery of therapeutic genes to the cells of a lesion enhances therapeutic efficacy and reduces toxic side effects. This process is especially important in cancer therapy when it is advantageous to avoid unwanted damage to healthy, normal cells. Incorporating cancer-specific ligan...

    journal_title:Journal of microbiology and biotechnology

    pub_type: 杂志文章

    doi:

    authors: Tu Y,Kim JS

    更新日期:2010-04-01 00:00:00

  • Isozyme analysis and relationships among three species in Malaysian Trichoderma isolates.

    abstract::Isozyme and protein electrophoresis data from mycelial extracts of 27 isolates of Trichoderma harzianum, 10 isolates of T. aureoviride and 10 isolates of T. longibrachiatum from Southern Peninsular Malaysia were investigated. The eight enzyme and a single protein pattern systems were analyzed. Three isozyme and total ...

    journal_title:Journal of microbiology and biotechnology

    pub_type: 杂志文章

    doi:10.4014/jmb.1004.04029

    authors: Siddiquee S,Tan SG,Yusof UK

    更新日期:2010-09-01 00:00:00

  • Morphology and adhesion of Campylobacter jejuni to chicken skin under varying conditions.

    abstract::The adhesion of Campylobacter jejuni to chicken skin, along with the associated morphological changes under aerobic conditions at 4, 25, and 37 degrees C and microaerobic (O2 5%, CO2 10%, N2 85%) conditions, were investigated using confocal laser scanning microscopy (CLSM), flow cytometry, and plate counting. The morp...

    journal_title:Journal of microbiology and biotechnology

    pub_type: 杂志文章

    doi:

    authors: Jang KI,Kim MG,Ha SD,Kim KS,Lee KH,Chung DH,Kim CH,Kim KY

    更新日期:2007-02-01 00:00:00

  • Sugarcane bagasse hydrolysis using yeast cellulolytic enzymes.

    abstract::Ethanol fuel production from lignocellulosic biomass is emerging as one of the most important technologies for sustainable development. To use this biomass, it is necessary to circumvent the physical and chemical barriers presented by the cohesive combination of the main biomass components, which hinders the hydrolysi...

    journal_title:Journal of microbiology and biotechnology

    pub_type: 杂志文章

    doi:10.4014/jmb.1302.02062

    authors: Souza AC,Carvalho FP,Silva e Batista CF,Schwan RF,Dias DR

    更新日期:2013-10-28 00:00:00

  • Effect of Corynebacterium glutamicum on Livestock Material Burial Treatment.

    abstract::In recent years, foot-and-mouth disease has occurred in all parts of the world. The animals with the disease are buried in the ground; therefore, their concentration could affect ground or groundwater. Moreover, the complete degradation of carcasses is not a certainty, and their disposal is important to prevent humans...

    journal_title:Journal of microbiology and biotechnology

    pub_type: 杂志文章

    doi:10.4014/jmb.1603.03056

    authors: Kim BN,Cho HS,Cha Y,Park JK,Kim G,Kim YH,Min J

    更新日期:2016-08-28 00:00:00

  • Purification and Characterization of an Alkali-Thermostable Lipase from Thermophilic Anoxybacillus flavithermus HBB 134.

    abstract::An intracellular lipase from Anoxybacillus flavithermus HBB 134 was purified to 7.4-fold. The molecular mass of the enzyme was found to be about 64 kDa. The maximum activity of the enzyme was at pH 9.0 and 50°C. The enzyme was stable between pH 6.0 and 11.0 at 25°C, 40°C, and 50°C for 24 h. The Km and Vmax of the enzy...

    journal_title:Journal of microbiology and biotechnology

    pub_type: 杂志文章

    doi:10.4014/jmb.1512.12056

    authors: Bakir ZB,Metin K

    更新日期:2016-06-28 00:00:00

  • Effects of structural difference of ionic liquids on the catalysis of horseradish peroxidase.

    abstract::The dependence of the catalytic properties of horseradish peroxidase on the structural changes of ionic liquids was investigated with two water-miscible ionic liquids, N-butyl-3- methypyridinium tetrafluoroborate ([BMPy][BF4]) and 1-butyl- 3-methylimidazolium methylsulfate ([BMIM][MeSO4]), each of which shares an anio...

    journal_title:Journal of microbiology and biotechnology

    pub_type: 杂志文章

    doi:

    authors: Hong ES,Park JH,Yoo IK,Ryu KG

    更新日期:2009-07-01 00:00:00

  • Expression, purification, and characterization of C-terminal amidated glucagon in Streptomyces lividans.

    abstract::Glucagon, a peptide hormone produced by alpha-cells of Langerhans islets, is a physiological antagonist of insulin and stimulator of its secretion. In order to improve its bioactivity, we modified its structure at the C-terminus by amidation catalyzed by a recombinant amidase in bacterial cells. The human gene coding ...

    journal_title:Journal of microbiology and biotechnology

    pub_type: 杂志文章

    doi:

    authors: Qi X,Jiang R,Yao C,Zhang R,Li Y

    更新日期:2008-06-01 00:00:00

  • Characterization of Polyester Cloth as an Alternative Separator to Nafion Membrane in Microbial Fuel Cells for Bioelectricity Generation Using Swine Wastewater.

    abstract::Polyester cloth (PC) was selected as a prospective inexpensive substitute separator material for microbial fuel cells (MFCs). PC was compared with a traditional Nafion proton exchange membrane (PEM) as an MFC separator by analyzing its physical and electrochemical properties. A single layer of PC showed higher mass tr...

    journal_title:Journal of microbiology and biotechnology

    pub_type: 杂志文章

    doi:10.4014/jmb.1608.08040

    authors: Kim T,Kang S,Sung JH,Kang YK,Kim YH,Jang JK

    更新日期:2016-12-28 00:00:00

  • A Combination Strategy for Construction of Peptide-β2m-H-2Kb Single Chain with Overlap Extension PCR and One-Step Cloning.

    abstract::The time-consuming and high-cost preparation of soluble peptide-major histocompatibility complexes (pMHC) currently limits their wide uses in monitoring antigen-specific T cells. The single-chain trimer (SCT) of peptide-β2m-MHC class I heavy chain was developed as an alternative strategy, but its gene fusion is hinder...

    journal_title:Journal of microbiology and biotechnology

    pub_type: 杂志文章

    doi:10.4014/jmb.1606.06038

    authors: Xu T,Li X,Wu Y,Shahzad KA,Wang W,Zhang L,Shen C

    更新日期:2016-12-28 00:00:00

  • Isolation and characterization of endocellulase-free multienzyme complex from newly isolated Thermoanaerobacterium thermosaccharolyticum strain NOI-1.

    abstract::An endocellulase-free multienzyme complex was produced by a thermophilic anaerobic bacterium, Thermoanaerobacterium thermosaccharolyticum strain NOI-1, when grown on xylan. The temperature and pH optima for growth were 60 degrees C and 6.0, respectively. The bacterial cells were found to adhere to insoluble xylan and ...

    journal_title:Journal of microbiology and biotechnology

    pub_type: 杂志文章

    doi:

    authors: Chimtong S,Tachaapaikoon C,Pason P,Kyu KL,Kosugi A,Mori Y,Ratanakhanokchai K

    更新日期:2011-03-01 00:00:00

  • A Synergy Effect of Trisodium Phosphate and Ethanol on Inactivation of Murine Norovirus 1 on Lettuce and Bell Pepper.

    abstract::The synergy effect of trisodium phosphate (TSP) and ethanol against murine norovirus 1 (MNV-1), as a surrogate for human noroviruses, on fresh produces was evaluated. More than 2% (w/v) of TSP effectively inactivated MNV-1. The single treatment of 1% TSP or 30% ethanol for 30 min was not effective on MNV-1; however, c...

    journal_title:Journal of microbiology and biotechnology

    pub_type: 杂志文章

    doi:10.4014/jmb.1503.03032

    authors: Kim EJ,Lee YD,Kim KY,Park JH

    更新日期:2015-12-28 00:00:00

  • Study of specific oligosaccharide structures related with swine flu (H1N1) and avian flu, and tamiflu as their remedy.

    abstract::The infection of pandemic influenza viruses such as swine flu (H1N1) and avian flu viruses to the host cells is related to the following two factors: First, the surface protein such as HA (hemagglutinin) and NA (neuraminidase) of the influenza virus. Second, the specific structure of the oligosaccharide [sialic acid(a...

    journal_title:Journal of microbiology and biotechnology

    pub_type: 杂志文章,评审

    doi:10.4014/jmb.1009.09013

    authors: Yoo ES

    更新日期:2011-05-01 00:00:00

  • Changes in Structural and Functional Responses of Bacterial Communities under Different Levels of Long-Term Compost Application in Paddy Soils.

    abstract::Soils amended for long-term with high levels of compost demonstrated greater abundance of bacterial members of the phylum Bacteroidetes whereas a decreasing trend in the relative abundance of phylum Acidobacteria was noted with increasing levels of compost. Metabolic profiles predicted by PICRUSt demonstrated differen...

    journal_title:Journal of microbiology and biotechnology

    pub_type: 杂志文章

    doi:10.4014/jmb.1811.11018

    authors: Samaddar S,Han GH,Chauhan P,Chatterjee P,Jeon S,Sa T

    更新日期:2019-02-28 00:00:00

  • Characterizations of denitrifying polyphosphate-accumulating bacterium Paracoccus sp. Strain YKP-9.

    abstract::A denitrifying polyphosphate-accumulating bacterium (YKP-9) was isolated from activated sludge of a 5-stage biological nutrient removal process with step feed system. This organism was a Gram-negative, coccus-shaped, facultative aerobic chemoorganotroph. It had a respiratory type of metabolism with oxygen, nitrate, an...

    journal_title:Journal of microbiology and biotechnology

    pub_type: 杂志文章

    doi:

    authors: Lee HW,Park YK

    更新日期:2008-12-01 00:00:00

  • Glucosyl Rubusosides by Dextransucrases Improve the Quality of Taste and Sweetness.

    abstract::Glucosyl rubusosides were synthesized by two dextransucrases. LcDexT was obtained from Leuconosotoc citreum, that LlDexT was obtained from Leuconostoc lactis. LcDexT and LlDexT regioselectively transferred a glucosyl residue to the 13-O-glucosyl moiety of rubusoside with high yield of 59-66% as analyzed by TLC and HPL...

    journal_title:Journal of microbiology and biotechnology

    pub_type: 杂志文章

    doi:10.4014/jmb.1512.12085

    authors: Ko JA,Ryu YB,Park JY,Kim CY,Kim JS,Nam SH,Lee WS,Kim YM

    更新日期:2016-03-01 00:00:00

  • Antitumor components from Naematoloma fasciculare.

    abstract::The bioassay-guided fractionation of MeOH extract from Naematoloma fasciculare afforded a petroleum ether fraction (NFPF) and four known compounds, which showed good antitumor activities to inhibit MCF-7 cell line proliferation in vitro and tumor growth in H(22) implanted mice in vivo. In addition, a number of unsatur...

    journal_title:Journal of microbiology and biotechnology

    pub_type: 杂志文章

    doi:

    authors: Yan D,Bao HY,Bau T,Li Y,Kim YH

    更新日期:2009-10-01 00:00:00

  • Identification of the σ⁷⁰-Dependent Promoter Controlling Expression of the ansPAB Operon of the Nitrogen-Fixing Bacterium Rhizobium etli.

    abstract::The aim of the present work was to examine the putative promoter region of the operon ansPAB and to determine the general elements required for the regulation of transcriptional activity. The transcriptional start site of the ansPAB promoter was determined by using highresolution S1-nuclease mapping. Sequence analysis...

    journal_title:Journal of microbiology and biotechnology

    pub_type: 杂志文章

    doi:10.4014/jmb.1503.03009

    authors: Moreno-Enríquez A,Evangelista-Martínez Z,Servín-González L,Flores-Carrasco ME

    更新日期:2015-08-01 00:00:00

  • Influence of plant species and environmental conditions on epiphytic and endophytic pink-pigmented facultative methylotrophic bacterial populations associated with field-grown rice cultivars.

    abstract::The total methylotrophic population associated with rice plants from different cultivars was enumerated at three different stages: vegetative, flowering, and harvesting. The bacterial population in the leaf, rhizosphere soil, endophytic in the stem and roots, and epiphytic in the florets and grains were determined fro...

    journal_title:Journal of microbiology and biotechnology

    pub_type: 杂志文章

    doi:

    authors: Madhaiyan M,Poonguzhali S,Sa T

    更新日期:2007-10-01 00:00:00

  • Antiinflammatory effect of lactic acid bacteria: inhibition of cyclooxygenase-2 by suppressing nuclear factor-kappaB in Raw264.7 macrophage cells.

    abstract::Lactobacillus casei 3260 (L. casei 3260) was evaluated in relation to the inflammatory response mediated by lipopolysaccharide (LPS)-induced nuclear factor-kappaB (NF-kappaB) and cyclooxygenase-2 (COX-2) expression in Raw264.7 macrophage cells. The treatment of Raw264.7 cells with L. casei 3260 significantly inhibited...

    journal_title:Journal of microbiology and biotechnology

    pub_type: 杂志文章

    doi:

    authors: Lee JM,Hwang KT,Jun WJ,Park CS,Lee MY

    更新日期:2008-10-01 00:00:00

  • Identification of Plasmid-Free Chlamydia muridarum Organisms Using a Pgp3 Detection-Based Immunofluorescence Assay.

    abstract::Chlamydia possesses a conserved 7.5 kb plasmid that is known to play an important role in chlamydial pathogenesis, since some chlamydial organisms lacking the plasmid are attenuated. The chlamydial transformation system developed recently required the use of plasmid-free organisms. Thus, the generation and identificat...

    journal_title:Journal of microbiology and biotechnology

    pub_type: 杂志文章

    doi:10.4014/jmb.1503.03072

    authors: Chen C,Zhong G,Ren L,Lu C,Li Z,Wu Y

    更新日期:2015-10-01 00:00:00

  • Cloning and expression of a thermostable alpha-galactosidase from the thermophilic fungus Talaromyces emersonii in the methylotrophic yeast Pichia pastoris.

    abstract::The first gene (alpha-gal1) encoding an extracellular alpha-Dgalactosidase from the thermophilic fungus Talaromyces emersonii was cloned and characterized. The alpha-gal1 gene consisted of an open reading frame of 1,792 base pairs interrupted by six introns that encoded a mature protein of 452 amino acids, including a...

    journal_title:Journal of microbiology and biotechnology

    pub_type: 杂志文章

    doi:

    authors: Simila J,Gernig A,Murray P,Fernandes S,Tuohy MG

    更新日期:2010-12-01 00:00:00

  • Quantitative real-time PCR assay for detection of Paenibacillus polymyxa using membrane-fusion protein-based primers.

    abstract::Paenibacillus polymyxa is known to be a plant-growthpromoting rhizobacterium. The present study describes a quantitative polymerase chain reaction (qPCR) assay for the specific detection and quantitation of P. polymyxa using a primer pair based on the sequence of a membranefusion protein for the amplification of a 268...

    journal_title:Journal of microbiology and biotechnology

    pub_type: 杂志文章

    doi:10.4014/jmb.1207.07018

    authors: Cho MS,Park DS,Lee JW,Chi HY,Sohn SI,Jeon BK,Ma JB

    更新日期:2012-11-01 00:00:00

  • Functional expression of amylosucrase, a glucan-synthesizing enzyme, from Arthrobacter chlorophenolicus A6.

    abstract::A gene (acas) designated as alpha-amylase was cloned from Arthrobacter chlorophenolicus A6. The multiple amino acid sequence analysis and functional expression of acas revealed that this gene really encoded an amylosucrase (ASase) instead of alpha-amylase. In fact, the recombinant enzyme exhibited typical ASase activi...

    journal_title:Journal of microbiology and biotechnology

    pub_type: 杂志文章

    doi:10.4014/jmb.1201.01056

    authors: Seo DH,Jung JH,Choi HC,Cho HK,Kim HH,Ha SJ,Yoo SH,Cha J,Park CS

    更新日期:2012-09-01 00:00:00