Ranking, selecting, and prioritising genes with desirability functions.

abstract：BACKGROUND:Mycobacterium avium subsp. hominissuis (MAH) is an emerging opportunistic human pathogen. It can cause pulmonary infections, lymphadenitis and disseminated infections in immuno-compromised patients. In addition, MAH is widespread in the environment, since it has been isolated from water, soil or dust. In rec...

journal_title：PeerJ

authors： Sanchini A,Dematheis F,Semmler T,Lewin A

更新日期：2017-01-03 00:00:00

abstract：:[This corrects the article DOI: 10.7717/peerj.4029.]. ...

journal_title：PeerJ

authors： Lang JM,Coil DA,Neches RY,Brown WE,Cavalier D,Severance M,Hampton-Marcell JT,Gilbert JA,Eisen JA

更新日期：2018-02-27 00:00:00

abstract：Background:Among Buddhist or Taoist Taiwanese residents, burning incense is a common source of indoor particulate matter (PM), including PM10 and PM2.5, and can adversely affect the health status of patients with chronic obstructive pulmonary diseases (COPD). However, few studies have focused on the effects of intermit...

journal_title：PeerJ

authors： Guo SE,Chi MC,Lin CM,Yang TM

更新日期：2020-08-31 00:00:00

abstract：:The canopy-forming, intertidal brown (Phaeophyceae) seaweed Fucus guiryi is distributed along the cold-temperate and warm-temperate coasts of Europe and North Africa. Curiously, an isolated population develops at Punta Calaburras (Alboran Sea, Western Mediterranean) but thalli are not present in midsummer every year, ...

journal_title：PeerJ

authors： Melero-Jiménez IJ,Salvo AE,Báez JC,Bañares-España E,Reul A,Flores-Moya A

更新日期：2017-11-14 00:00:00

abstract：:Sea cucumbers possess the remarkable capacity to regenerate their body parts or organs. Regeneration of host organs and/or body parts involves reconstruction of the host associated microbiota, however, the dynamics and contribution of microbiota to the regeneration process are largely unknown due to a lack of experime...

journal_title：PeerJ

authors： Yamazaki Y,Sakai Y,Yu J,Mino S,Sawabe T

更新日期：2020-12-01 00:00:00

abstract：Background:Vegetation in the Mongolian Plateau is very sensitive to climate change, which has a significant impact on the regulation of terrestrial carbon cycle. Methods:We analyzed spatio-temporal changes of both growing season and the seasonal Normalized Difference Vegetation Index (NDVI) using simple linear trend a...

journal_title：PeerJ

authors： Meng M,Huang N,Wu M,Pei J,Wang J,Niu Z

更新日期：2019-09-30 00:00:00

abstract：:Insect pollinators provide an essential ecosystem service by transferring pollen to crops and native vegetation. The extent to which pollinator communities vary both spatially and temporally has important implications for ecology, conservation and agricultural production. However, understanding the complex interaction...

journal_title：PeerJ

authors： Willcox BK,Robson AJ,Howlett BG,Rader R

更新日期：2018-10-19 00:00:00

abstract：:In this work, we studied the main characteristics of flowering, reproductive system and diversity of pollinators for the biofuel plant Jatropha curcas (L.) in a site of tropical southeastern Mexico, within its center of origin. The plants were monoecious with inflorescences of unisexual flowers. The male flowers produ...

journal_title：PeerJ

authors： Rincón-Rabanales M,Vargas-López LI,Adriano-Anaya L,Vázquez-Ovando A,Salvador-Figueroa M,Ovando-Medina I

更新日期：2016-03-14 00:00:00

abstract：:Background. Geriatric syndromes (GS) exhibit high prevalence in patients with end-stage renal disease (ESRD) under chronic dialysis irrespective of age. We sought to determine whether GS influences medication adherence in ESRD patients. Methods. A prospective cohort of chronic dialysis patients was assembled. The pres...

journal_title：PeerJ

authors： Chao CT,Huang JW,COGENT (COhort of GEriatric Nephrology in NTUH) study group.

更新日期：2016-06-14 00:00:00

abstract：:It can be challenging to identify scleractinian corals from the genus Pocillopora Lamarck 1816 in the field because of their large range of inter- and intra-specific morphological variation that co-occur with changes in the physical environment. This task is made more arduous in the context of a depth gradient, where ...

journal_title：PeerJ

authors： De Palmas S,Soto D,Denis V,Ho MJ,Chen CA

更新日期：2018-10-25 00:00:00

abstract：:The Hydroporus memnonius species group includes both widespread and range restricted diving beetle taxa in the western Palaearctic, some of which have been divided into a number of geographical subspecies. Of these, Hydroporus necopinatus is distributed in the far west of Europe, from central Spain to southern Britain...

journal_title：PeerJ

authors： Bilton DT,Turner L,Foster GN

更新日期：2017-03-09 00:00:00

abstract：:Synaptic exocytosis requires the assembly of syntaxin 1A and SNAP-25 on the plasma membrane and synaptobrevin 2 (VAMP2) on the vesicular membrane to bridge the two opposite membranes. It is believed that the three SNARE proteins assemble in steps along the dynamic assembly pathway. The C-terminus of SNAP-25 is known t...

journal_title：PeerJ

authors： Lu B

更新日期：2015-06-30 00:00:00

abstract：INTRODUCTION:Theory predicts that habitat fragmentation, by reducing population size and increasing isolation among remnant populations, can alter their genetic diversity and structure. A cascade of effects is expected: genetic drift and inbreeding after a population bottleneck, changes in biotic interactions that may ...

journal_title：PeerJ

authors： Suárez-Montes P,Chávez-Pesqueira M,Núñez-Farfán J

更新日期：2016-12-22 00:00:00

abstract：:Mollusc shells are an abundant resource that have been long used to predict the structures of ancient ecological communities, examine evolutionary processes, reconstruct paleoenvironmental conditions, track and predict responses to climatic change, and explore the movement of hominids across the globe. Despite the ubi...

journal_title：PeerJ

authors： Ferreira S,Ashby R,Jeunen GJ,Rutherford K,Collins C,Todd EV,Gemmell NJ

更新日期：2020-07-30 00:00:00

abstract：BACKGROUND:The human microbiota plays a key role in health and disease, and bacteriocins, which are small, bacterially produced, antimicrobial peptides, are likely to have an important function in the stability and dynamics of this community. Here we examined the density and distribution of the subclass I lantibiotic m...

journal_title：PeerJ

authors： Walsh CJ,Guinane CM,O' Toole PW,Cotter PD

更新日期：2017-04-27 00:00:00

abstract：Background:The effect of fat tissue on a developing individual is fundamentally different from the effect on an adult. Several changes caused by obesity during sexual maturation have an irreversible and severe negative effect (lower fertility, reduced final height, type 2 diabetes mellitus) even for those who have subs...

journal_title：PeerJ

authors： Novak JM,Bruzek J,Zamrazilova H,Vankova M,Hill M,Sedlak P

更新日期：2020-05-11 00:00:00

abstract：:Cellulosic waste represents a significant and underutilized carbon source for the biofuel industry. Owing to the recalcitrance of crystalline cellulose to enzymatic degradation, it is necessary to design economical methods of liberating the fermentable sugars required for bioethanol production. One route towards unloc...

journal_title：PeerJ

authors： Hamberg Y,Ruimy-Israeli V,Dassa B,Barak Y,Lamed R,Cameron K,Fontes CM,Bayer EA,Fried DB

更新日期：2014-10-30 00:00:00

abstract：:Type I restriction-modification enzymes are multisubunit, multifunctional molecular machines that recognize specific DNA target sequences, and their multisubunit organization underlies their multifunctionality. EcoR124I is the archetype of Type I restriction-modification family IC and is composed of three subunit type...

journal_title：PeerJ

authors： Bialevich V,Sinha D,Shamayeva K,Guzanova A,Řeha D,Csefalvay E,Carey J,Weiserova M,Ettrich RH

更新日期：2017-01-18 00:00:00

abstract：:Background. Caesarean birth rates in North America continue to rise, in the absence of benefit for mothers and babies. One reason may be that hospitalized labouring women spend most of their labours in recumbent or semi-recumbent positions. Although hands-and-knees position has theoretical advantages, efforts to encou...

journal_title：PeerJ

authors： Hodnett ED,Stremler R,Halpern SH,Weston J,Windrim R

更新日期：2013-02-12 00:00:00

abstract：Background:The enriched environment (EE) is a laboratory housing model that emerged from efforts to minimize the impact of environmental conditions on laboratory animals. Recently, we showed that EE promoted positive effects on behavior and cortisol levels in zebrafish submitted to the unpredictable chronic stress (UCS...

journal_title：PeerJ

authors： Marcon M,Mocelin R,Sachett A,Siebel AM,Herrmann AP,Piato A

更新日期：2018-07-05 00:00:00

abstract：:The emergence of herbicide-resistant weeds is a major threat facing modern agriculture. Over 470 weedy-plant populations have developed resistance to herbicides. Traditional evolutionary mechanisms are not always sufficient to explain the rapidity with which certain weed populations adapt in response to herbicide expo...

journal_title：PeerJ

authors： Kim G,Clarke CR,Larose H,Tran HT,Haak DC,Zhang L,Askew S,Barney J,Westwood JH

更新日期：2017-07-20 00:00:00

abstract：:Background. A "cafeteria" diet is a self-selected high-fat diet, providing an excess of energy, which can induce obesity. Excess of lipids in the diet hampers glucose utilization eliciting insulin resistance, which, further limits amino acid oxidation for energy. Methods. Male Wistar rats were exposed for a month to "...

journal_title：PeerJ

authors： Sabater D,Agnelli S,Arriarán S,Romero Mdel M,Fernández-López JA,Alemany M,Remesar X

更新日期：2016-08-03 00:00:00

abstract：:According to current molecular evidence, the Chionaspis pinifoliae heterophyllae species complex has been recognized as 10 cryptic species. In this study, we construct potential distribution maps for seven cryptic species based on climatic variables. This was done to assess the main environmental factors that have con...

journal_title：PeerJ

authors： Zhao Q,Zhang H,Wei J

更新日期：2019-05-31 00:00:00

abstract：:Synechocystis gathered momentum in modelling studies and biotechnological applications owing to multiple factors like fast growth, ability to fix carbon dioxide into valuable products, and the relative ease of genetic manipulation. Synechocystis physiology and metabolism, and consequently, the productivity of Synechoc...

journal_title：PeerJ

authors： Cordara A,Re A,Pagliano C,Van Alphen P,Pirone R,Saracco G,Branco Dos Santos F,Hellingwerf K,Vasile N

更新日期：2018-07-27 00:00:00

abstract：:Bcl-2 (B-cell lymphoma 2) protein is localized in the outer membrane of mitochondria, where it plays an important role in promoting cellular survival and inhibiting the actions of pro-apoptotic proteins. PRDM10 is a member of the PR/SET family of epigenetic regulators and may play a role in development and cell differ...

journal_title：PeerJ

authors： Chen N,Hu T,Gui Y,Gao J,Li Z,Huang S

更新日期：2019-05-15 00:00:00

abstract：:Ethylene response factors (ERFs) are plant-specific transcription factors (TFs) that play important roles in plant growth and stress defense and have received a great amount of attention in recent years. In this study, seven ERF genes related to abiotic stress tolerance and response were identified in plants of the Po...

journal_title：PeerJ

authors： Huang J,Wang S,Wang X,Fan Y,Han Y

更新日期：2020-10-20 00:00:00

abstract：:The mature spermatozoa of Stephanostomum murielae and Stephanostomoides tenuis are described by transmission electron microscopy. They present several ultrastructural features previously reported in other digeneans. Their spermatozoa possess two axonemes of different length showing the 9 + '1' trepaxonematan pattern, ...

journal_title：PeerJ

authors： Bakhoum AJ,Quilichini Y,Justine JL,Bray RA,Bâ CT,Marchand B

更新日期：2015-02-12 00:00:00

abstract：:Background. A large proportion of natural grasslands around the world is exposed to overgrazing resulting in land degradation and biodiversity loss. Although there is an increasing effort in the promotion of sustainable livestock management, rangeland degradation still occurs because animals' foraging behaviour is hig...

journal_title：PeerJ

authors： di Virgilio A,Morales JM

更新日期：2016-06-21 00:00:00

abstract：:Parrotfish are fundamental species in controlling algal phase-shifts and ensuring the resilience of coral reefs. Nevertheless, little is known on their ecological role in the south-western Atlantic Ocean. The present study analysed the ontogenetic foraging activity and feeding selectivity of the Brazilian endemic parr...

journal_title：PeerJ

authors： Pereira PH,Santos M,Lippi DL,Silva P

更新日期：2016-10-12 00:00:00

abstract：:Background. Low use of maternal healthcare services is one of the reasons why maternal mortality is still considerably high among adolescents mothers in India. To increase the utilization of these services, it is necessary to identify factors that affect service utilization. To our knowledge, no national level study i...

journal_title：PeerJ

authors： Singh A,Kumar A,Pranjali P

更新日期：2014-11-04 00:00:00