Abstract：
:We report the complete genome sequencing of two Escherichia coli T5-related bacteriophages, DT57C and DT571/2, isolated from the same specimen of horse feces. These two isolates share 96% nucleotide sequence identity and can thus be considered representatives of the same novel species within the genus T5likevirus. The observed variation in the ltfA gene of these phages, resulting from a recent recombination event, may explain the observed host-range differences, suggesting that a modular mechanism makes a significant contribution to the short-term evolution (or adaptation) of T5-like phage genomes in the intestinal ecosystem. Comparison of our isolates to their closest relative, coliphage T5, revealed high overall synteny of the genomes and high conservation of the sequences of almost all structural proteins as well as of the other proteins with identified functions. At the same time, numerous alterations and non-orthologous replacements of non-structural protein genes (mostly of those with unknown functions) as well as substantial differences in tail fiber locus organization support the conclusion that DT57C and DT571/2 form a species-level group clearly distinct from bacteriophage T5.
journal_name
Arch Viroljournal_title
Archives of virologyauthors
Golomidova AK,Kulikov EE,Prokhorov NS,Guerrero-Ferreira RC,Ksenzenko VN,Tarasyan KK,Letarov AVdoi
10.1007/s00705-015-2582-0subject
Has Abstractpub_date
2015-12-01 00:00:00pages
3133-7issue
12eissn
0304-8608issn
1432-8798pii
10.1007/s00705-015-2582-0journal_volume
160pub_type
杂志文章abstract：:Genetic relationships between the genome segments of six cypovirus (CPV) isolates were analysed by RNA cross-hybridisation. These included three type 1 viruses and single isolates of types 2, 5 and 12, which collectively are identical to those previously compared by serology and electrophoresis [Mertens et al. (1989),...
journal_title：Archives of virology
pub_type： 杂志文章
doi：10.1007/s007050050525
更新日期：1999-01-01 00:00:00
abstract：:We have recently demonstrated the geographic isolation of rice tungro bacilliform virus (RTBV) populations in the tungro-endemic provinces of Isabela and North Cotabato, Philippines. In this study, we examined the genetic structure of the virus populations at the tungro-outbreak sites of Lanao del Norte, a province ad...
journal_title：Archives of virology
pub_type： 杂志文章
doi：10.1007/s007050070013
更新日期：2000-01-01 00:00:00
abstract：:Due to their natural host-range restriction to avian species, canarypox virus (CP) and fowlpox virus (FP) represent efficient and safe vaccine vectors, as they correctly express transgenes in human cells, elicit complete immune responses, and show protective efficacy in preclinical animal models. At present, no inform...
journal_title：Archives of virology
pub_type： 杂志文章
doi：10.1007/s00705-010-0663-7
更新日期：2010-06-01 00:00:00
abstract：:An Indonesian very virulent (vv) strain of infectious bursal disease virus (IBDV), designated Tasik94, was characterised both in vivo and at the molecular level. Inoculation of Tasik94 into 5-week-old specific-pathogen-free (SPF) chickens resulted in 100% morbidity and 45% mortality. The complete nucleotide and predic...
journal_title：Archives of virology
pub_type： 杂志文章
doi：10.1007/s00705-002-0817-3
更新日期：2002-07-01 00:00:00
abstract：:During infection with herpes simplex virus type 1 (HSV-1) the activity of tyrosine hydroxylase (TH) in PC12 pheochromocytoma cells was initially depressed reaching a nadir at 6 hours post-inoculation, but recovered rapidly with a return to baseline activity by 8 to 9 hours post-inoculation. Subsequently, TH activity a...
journal_title：Archives of virology
pub_type： 杂志文章
doi：10.1007/BF01310965
更新日期：1985-01-01 00:00:00
abstract：:Tobacco vein banding mosaic virus (TVBMV) is of increasing importance in tobacco production. Knowledge of the genetic structure and variability of the virus population is vital for developing sustainable management. In this study, 24 new TVBMV isolates from Sichuan Province together with 46 previous isolates were stud...
journal_title：Archives of virology
pub_type： 杂志文章
doi：10.1007/s00705-019-04342-6
更新日期：2019-10-01 00:00:00
abstract：:Two strains of mouse cytomegalovirus (MCMV) propagated in mouse salivary glands could be distinguished in neutralization tests. Cell (mouse embryo fibroblast)-passaged virus of either strain was generally 10-20 times easier to neutralize than virus produced in mouse salivary glands. Evidence was obtained that mouse im...
journal_title：Archives of virology
pub_type： 杂志文章
doi：10.1007/BF01315153
更新日期：1981-01-01 00:00:00
abstract：:Atazanavir (ATZ) is a well-tolerated protease inhibitor that can be boosted with ritonavir (r) to treat infection with resistant strains of human immunodeficiency virus 1 (HIV-1). The aim of this meta-analysis was to compare the efficacy, safety, and metabolic effects of ATZ/r regimen versus commonly used antiretrovir...
journal_title：Archives of virology
pub_type： 杂志文章,meta分析,评审
doi：10.1007/s00705-017-3346-9
更新日期：2017-08-01 00:00:00
abstract：:Using monoclonal antibodies raised against a Faba bean necrotic yellows virus (FBNYV) isolate from Egypt and a Faba bean necrotic stunt virus (FBNSV) isolate from Ethiopia, a striking serological variability among nanovirus isolates from faba bean in Morocco was revealed. To obtain a better understanding of this nanov...
journal_title：Archives of virology
pub_type： 杂志文章
doi：10.1007/s00705-009-0548-9
更新日期：2010-01-01 00:00:00
abstract：:A physical map for the genome of Spodoptera littoralis (Egyptian cottonworm) nuclear polyhedrosis virus of B-type (S1MNPV-B) [Cherry CL, Summers MD (1985) J Invertebr Pathol 46: 289-295] was prepared using the restriction endonucleases SmaI, SfiI, NotI, ApaI, KpnI, BstEII, PstI, SacI, and HindIII. The size of the geno...
journal_title：Archives of virology
pub_type： 杂志文章
doi：10.1007/BF01313815
更新日期：1989-01-01 00:00:00
abstract：:The viral reverse transcriptase gene was amplified from the plasma of 27 drug-naïve and five drug-experienced HIV patients in Northern India. Follow-up samples of naïve patients after antiretroviral therapy initiation were collected in six patients at 3 months and three patients at 6 months. Phylogenetic analysis reve...
journal_title：Archives of virology
pub_type： 杂志文章
doi：10.1007/s00705-010-0605-4
更新日期：2010-04-01 00:00:00
abstract：:A rice protein homologous to eukaryotic translation elongation factor 1A (eEF-1A) was found to interact with the Pns6 of rice ragged stunt virus (RRSV), the type member of the genus Oryzavirus, family Reoviridae, in yeast two-hybrid screening. The interaction between the rice protein, designated OseEF-1A, and RRSV Pns...
journal_title：Archives of virology
pub_type： 杂志文章
doi：10.1007/s00705-013-1703-x
更新日期：2013-10-01 00:00:00
abstract：:Shorebirds on their southerly migration from Siberia to Australia, may pass through Asian regions currently experiencing outbreaks of highly pathogenic H5N1 influenza. To test for the presence of avian influenza viruses in migratory shorebirds arriving in Australia during spring 2004, 173 cloacal swabs were collected ...
journal_title：Archives of virology
pub_type： 杂志文章
doi：10.1007/s00705-006-0784-1
更新日期：2006-11-01 00:00:00
abstract：:At necropsy, several dogs which died showing symptoms of hemorrhagic diarrhea, had significant lesions of the mucosa that were found especially in the duodenum and upper part of the small bowel. Study of ultrathin sections from the diseased mucosa revealed particles resembling parvoviruses in altered nuclei of cells o...
journal_title：Archives of virology
pub_type： 杂志文章
doi：10.1007/BF01320586
更新日期：1979-01-01 00:00:00
abstract：:Algeria is the largest country of Africa, with a population of 40 million inhabitants living in disparate environments from the Sahara to the large cities of the Mediterranean coast. The molecular epidemiology of hepatitis B virus (HBV) variants has been partially described, but variations in the seroprevalence of HBV...
journal_title：Archives of virology
pub_type： 杂志文章
doi：10.1007/s00705-017-3284-6
更新日期：2017-06-01 00:00:00
abstract：:Emilia sonchifolia is a traditionally used medicinal plant that is widespread in tropical and subtropical regions of the world. Yellow vein symptoms were observed in E. sonchifolia plants in fields in the county of Koh Samui, Surat Thani Province, Thailand, in August 2015. Two distinct begomoviruses, designated TH4872...
journal_title：Archives of virology
pub_type： 杂志文章
doi：10.1007/s00705-018-3762-5
更新日期：2018-06-01 00:00:00
abstract：:Extensive heterogeneity in electropherotypes observed among group A human rotaviruses has been considered as a result of two major mechanisms; i.e., the accumulation of point mutations and genetic reassortment between concurrently-circulating strains. However, no evidence was reported thus far indicating that any one ...
journal_title：Archives of virology
pub_type： 杂志文章
doi：10.1007/s007050170162
更新日期：2001-01-01 00:00:00
abstract：:The leafhopper Euscelidius variegatus is a natural vector of chrysanthemum yellows phytoplasma (CY) and an efficient vector of flavescence dorée phytoplasma (FD) under laboratory conditions. During a transcriptome sequencing (RNA-seq) project aimed at investigating the interactions between the insect and the two phyto...
journal_title：Archives of virology
pub_type： 杂志文章
doi：10.1007/s00705-016-3158-3
更新日期：2017-03-01 00:00:00
abstract：:RNA extracted from 120 leaf specimens from 17 plant species was pooled, and polyadenylated RNA species were sequenced together without barcoding in one lane using massively parallel sequencing technology. After analysis, complete or partial genome sequences representing 20 virus isolates of 16 polyadenylated RNA speci...
journal_title：Archives of virology
pub_type： 杂志文章
doi：10.1007/s00705-011-1166-x
更新日期：2012-02-01 00:00:00
abstract：:In previous work, we demonstrated that the arenavirus Junín virus (JUNV) is able to activate Akt by means of the phosphatidylinositol-3-kinase (PI3K) survival pathway during virus entry. This work extends our study, emphasizing the relevance of this pathway in the establishment and maintenance of persistent infection ...
journal_title：Archives of virology
pub_type： 杂志文章
doi：10.1007/s00705-014-2298-6
更新日期：2015-02-01 00:00:00
abstract：:Here, we report a novel virulent P2-like bacteriophage, R18C, isolated from rabbit faeces, which, in addition to Escherichia coli K-12 strains, was able to be propagated on Citrobacter rodentium strain ICC169 and a range of Shigella sonnei strains with high efficiency of plating (EOP). It represents the first lytic ba...
journal_title：Archives of virology
pub_type： 杂志文章
doi：10.1007/s00705-019-04424-5
更新日期：2019-12-01 00:00:00
abstract：:Poliovirus induces bcl-2-independent apoptosis in the human U937 promonocytic cell line [28]. Here we describe that this cell death, induced after viral infection, correlates with the modulation of the protooncoprotein Bcl-xl. Furthermore, poliovirus infection decreases the detected Bcl-xl in a U937 clone that overexp...
journal_title：Archives of virology
pub_type： 杂志文章
doi：10.1007/s00705-002-0881-8
更新日期：2002-12-01 00:00:00
abstract：:A previously unidentified chicken parvovirus (ChPV) strain, associated with runting-stunting syndrome (RSS), is now endemic among chickens in China. To explore the genetic diversity of ChPV strains, we determined the first complete genome sequence of a novel ChPV isolate (GX-CH-PV-7) identified in chickens in Guang Xi...
journal_title：Archives of virology
pub_type： 杂志文章
doi：10.1007/s00705-016-2999-0
更新日期：2016-11-01 00:00:00
abstract：:The structural proteins of hemorrhagic enteritis (HEV), a turkey adenovirus, were analyzed by polyacrylamide gel electrophoresis (PAGE) and Western blotting using polyspecific, monospecific and monoclonal antibodies for detection. In purified HEV preparations, eleven polypeptides with apparent molecular weights rangin...
journal_title：Archives of virology
pub_type： 杂志文章
doi：10.1007/BF01309695
更新日期：1992-01-01 00:00:00
abstract：:Outbreaks of swine influenza were first observed in Japan in 1978. A number of influenza viruses were isolated from diseased swine. Almost all viruses isolated were swine influenza virus (Hsw 1 N1) but two viruses isolated from the nasal swabs of swine showing clinical signs of influenza in the Kanagawa prefecture wer...
journal_title：Archives of virology
pub_type： 杂志文章
doi：10.1007/BF01314741
更新日期：1980-01-01 00:00:00
abstract：:A factor secreted from avian cells infected non productively with a non cytopathogenic mutant of vesicular stomatitis virus (VSV ts 1026) interferes with HIV replication in CEM cells and peripheral blood monocytes (PBL). Production of infectious particles is decreased and many virions lack cores and/or spikes. In CEM ...
journal_title：Archives of virology
pub_type： 杂志文章
doi：10.1007/BF01317266
更新日期：1992-01-01 00:00:00
abstract：:Northern pike from several locations in central Canada were observed to have two different types of hyperplastic epidermal lesions on the body and fins. One type of epidermal hyperplasia consisted of flat lesions, bluish-white in color with a granular or "gritty" appearance. Histological examination of this granular l...
journal_title：Archives of virology
pub_type： 杂志文章
doi：10.1007/BF01310815
更新日期：1984-01-01 00:00:00
abstract：:Torque teno sus virus 1 (TTSuV1) is a novel virus that has been found widely distributed in the swine population in recent years. Analysis of codon usage can reveal much about the molecular evolution of TTSuV1. In this study, synonymous codon usage patterns and the key determinants in the coding region of 29 available...
journal_title：Archives of virology
pub_type： 杂志文章
doi：10.1007/s00705-012-1480-y
更新日期：2013-01-01 00:00:00
abstract：:Beauveria bassiana is a ubiquitous entomopathogen infecting hundreds of insect species. We have determined the genomic organization and the complete nucleotide sequence of a novel virus isolated from the isolate A24 of B. bassiana. Phylogenetic analysis of the polymerase gene reveals that the virus, tentatively named ...
journal_title：Archives of virology
pub_type： 杂志文章
doi：10.1007/s00705-015-2416-0
更新日期：2015-06-01 00:00:00
abstract：:A viroid was isolated from symptomless Coleus blumei cultivar (cv.) 'Rainbow Gold' plants using the bidirectional PAGE method for analysis of small circular RNA molecules. The viriod was transmitted to viroid-free plants of Coleus blumei cv. 'Scarlet Dragonfly' by mechanical inoculation. Cloning and sequencing reveale...
journal_title：Archives of virology
pub_type： 杂志文章
doi：10.1007/BF01718222
更新日期：1996-01-01 00:00:00
